Protein–RNA interactions for Protein: P51157

RAB28, Ras-related protein Rab-28, humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28P51157 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RAB28P51157 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RAB28P51157 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RAB28P51157 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC18.67■□□□□ 0.58
RAB28P51157 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC18.67■□□□□ 0.58
RAB28P51157 B3GAT3P1-201ENST00000471720 806 ntBASIC18.67■□□□□ 0.58
RAB28P51157 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC18.67■□□□□ 0.58
RAB28P51157 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC18.67■□□□□ 0.58
RAB28P51157 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
RAB28P51157 REXO1L10P-201ENST00000615707 1290 ntBASIC18.67■□□□□ 0.58
RAB28P51157 REXO1L12P-201ENST00000622156 912 ntBASIC18.67■□□□□ 0.58
RAB28P51157 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
RAB28P51157 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
RAB28P51157 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
RAB28P51157 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RAB28P51157 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC18.67■□□□□ 0.58
RAB28P51157 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
RAB28P51157 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC18.67■□□□□ 0.58
RAB28P51157 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RAB28P51157 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
RAB28P51157 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
RAB28P51157 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
RAB28P51157 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC18.66■□□□□ 0.58
RAB28P51157 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RAB28P51157 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC18.66■□□□□ 0.58
RAB28P51157 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
RAB28P51157 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
RAB28P51157 AC004951.3-201ENST00000418645 1148 ntBASIC18.66■□□□□ 0.58
RAB28P51157 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
RAB28P51157 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
RAB28P51157 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
RAB28P51157 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC18.66■□□□□ 0.58
RAB28P51157 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC18.66■□□□□ 0.58
RAB28P51157 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC18.66■□□□□ 0.58
RAB28P51157 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC18.66■□□□□ 0.58
RAB28P51157 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC18.66■□□□□ 0.58
RAB28P51157 SDHAP1-207ENST00000440850 2000 ntBASIC18.66■□□□□ 0.58
RAB28P51157 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
RAB28P51157 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RAB28P51157 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RAB28P51157 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RAB28P51157 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RAB28P51157 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC18.65■□□□□ 0.58
RAB28P51157 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
RAB28P51157 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
RAB28P51157 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RAB28P51157 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RAB28P51157 MESTP1-201ENST00000404287 994 ntBASIC18.65■□□□□ 0.58
RAB28P51157 AC011506.1-201ENST00000474329 610 ntBASIC18.65■□□□□ 0.58
RAB28P51157 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
RAB28P51157 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
RAB28P51157 SNX21-213ENST00000614929 587 ntTSL 5 BASIC18.65■□□□□ 0.58
RAB28P51157 AC011298.2-201ENST00000617989 482 ntBASIC18.65■□□□□ 0.58
RAB28P51157 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RAB28P51157 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
RAB28P51157 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC18.65■□□□□ 0.58
RAB28P51157 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RAB28P51157 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
RAB28P51157 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
RAB28P51157 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC18.65■□□□□ 0.58
RAB28P51157 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
RAB28P51157 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
RAB28P51157 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RAB28P51157 Z82202.1-201ENST00000623446 1880 ntBASIC18.65■□□□□ 0.58
RAB28P51157 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
RAB28P51157 KRT8P41-201ENST00000533985 1514 ntBASIC18.64■□□□□ 0.58
RAB28P51157 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RAB28P51157 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
RAB28P51157 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC18.64■□□□□ 0.57
RAB28P51157 DERL1-203ENST00000419562 918 ntTSL 2 BASIC18.64■□□□□ 0.57
RAB28P51157 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC18.64■□□□□ 0.57
RAB28P51157 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
RAB28P51157 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC18.64■□□□□ 0.57
RAB28P51157 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC18.64■□□□□ 0.57
RAB28P51157 DGCR10-201ENST00000609839 495 ntBASIC18.64■□□□□ 0.57
RAB28P51157 AC130371.2-201ENST00000619443 611 ntBASIC18.64■□□□□ 0.57
RAB28P51157 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
RAB28P51157 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RAB28P51157 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC18.64■□□□□ 0.57
RAB28P51157 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC18.64■□□□□ 0.57
RAB28P51157 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC18.64■□□□□ 0.57
RAB28P51157 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
RAB28P51157 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RAB28P51157 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RAB28P51157 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
RAB28P51157 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC18.63■□□□□ 0.57
RAB28P51157 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
RAB28P51157 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC18.63■□□□□ 0.57
RAB28P51157 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC18.63■□□□□ 0.57
RAB28P51157 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC18.63■□□□□ 0.57
RAB28P51157 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC18.63■□□□□ 0.57
RAB28P51157 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RAB28P51157 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC18.63■□□□□ 0.57
RAB28P51157 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC18.63■□□□□ 0.57
RAB28P51157 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC18.63■□□□□ 0.57
RAB28P51157 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
RAB28P51157 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC18.63■□□□□ 0.57
RAB28P51157 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC18.63■□□□□ 0.57
RAB28P51157 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC18.63■□□□□ 0.57
RAB28P51157 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms