Protein–RNA interactions for Protein: P35236

PTPN7, Tyrosine-protein phosphatase non-receptor type 7, humanhuman

Predictions only

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7P35236 POM121L13P-201ENST00000422362 380 ntBASIC19.97■□□□□ 0.79
PTPN7P35236 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
PTPN7P35236 RGMA-211ENST00000557420 989 ntTSL 3 BASIC19.97■□□□□ 0.79
PTPN7P35236 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
PTPN7P35236 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC19.97■□□□□ 0.79
PTPN7P35236 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
PTPN7P35236 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC19.97■□□□□ 0.79
PTPN7P35236 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PTPN7P35236 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
PTPN7P35236 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PTPN7P35236 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PTPN7P35236 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
PTPN7P35236 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC19.97■□□□□ 0.79
PTPN7P35236 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PTPN7P35236 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
PTPN7P35236 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
PTPN7P35236 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC19.96■□□□□ 0.79
PTPN7P35236 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PTPN7P35236 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PTPN7P35236 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC19.96■□□□□ 0.79
PTPN7P35236 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC19.96■□□□□ 0.79
PTPN7P35236 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC19.96■□□□□ 0.79
PTPN7P35236 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC19.96■□□□□ 0.79
PTPN7P35236 UNC93B5-201ENST00000530315 699 ntBASIC19.96■□□□□ 0.79
PTPN7P35236 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PTPN7P35236 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
PTPN7P35236 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
PTPN7P35236 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PTPN7P35236 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PTPN7P35236 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PTPN7P35236 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC19.96■□□□□ 0.79
PTPN7P35236 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PTPN7P35236 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
PTPN7P35236 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PTPN7P35236 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PTPN7P35236 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC19.96■□□□□ 0.79
PTPN7P35236 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC19.96■□□□□ 0.79
PTPN7P35236 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
PTPN7P35236 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
PTPN7P35236 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PTPN7P35236 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
PTPN7P35236 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
PTPN7P35236 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
PTPN7P35236 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
PTPN7P35236 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PTPN7P35236 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
PTPN7P35236 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
PTPN7P35236 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC19.95■□□□□ 0.78
PTPN7P35236 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC19.95■□□□□ 0.78
PTPN7P35236 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC19.95■□□□□ 0.78
PTPN7P35236 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC19.95■□□□□ 0.78
PTPN7P35236 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC19.95■□□□□ 0.78
PTPN7P35236 USP39-202ENST00000409025 1946 ntTSL 5 BASIC19.95■□□□□ 0.78
PTPN7P35236 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
PTPN7P35236 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC19.95■□□□□ 0.78
PTPN7P35236 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
PTPN7P35236 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
PTPN7P35236 UBQLN4P1-201ENST00000461599 1801 ntBASIC19.95■□□□□ 0.78
PTPN7P35236 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PTPN7P35236 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PTPN7P35236 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC19.94■□□□□ 0.78
PTPN7P35236 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PTPN7P35236 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC19.94■□□□□ 0.78
PTPN7P35236 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
PTPN7P35236 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
PTPN7P35236 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
PTPN7P35236 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PTPN7P35236 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
PTPN7P35236 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
PTPN7P35236 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
PTPN7P35236 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
PTPN7P35236 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC19.94■□□□□ 0.78
PTPN7P35236 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC19.94■□□□□ 0.78
PTPN7P35236 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
PTPN7P35236 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PTPN7P35236 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC19.94■□□□□ 0.78
PTPN7P35236 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
PTPN7P35236 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PTPN7P35236 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
PTPN7P35236 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC19.94■□□□□ 0.78
PTPN7P35236 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC19.94■□□□□ 0.78
PTPN7P35236 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PTPN7P35236 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
PTPN7P35236 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
PTPN7P35236 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PTPN7P35236 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC19.94■□□□□ 0.78
PTPN7P35236 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
PTPN7P35236 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
PTPN7P35236 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC19.94■□□□□ 0.78
PTPN7P35236 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
PTPN7P35236 AIRN-201ENST00000601203 4374 ntBASIC19.94■□□□□ 0.78
PTPN7P35236 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
PTPN7P35236 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
PTPN7P35236 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PTPN7P35236 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC19.94■□□□□ 0.78
PTPN7P35236 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC19.94■□□□□ 0.78
PTPN7P35236 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
PTPN7P35236 FEM1AP3-201ENST00000403722 1741 ntBASIC19.93■□□□□ 0.78
PTPN7P35236 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
PTPN7P35236 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms