Protein–RNA interactions for Protein: P35221

CTNNA1, Catenin alpha-1, humanhuman

Known RBP Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1P35221 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CTNNA1P35221 AL138781.2-201ENST00000617896 1843 ntBASIC20.37■□□□□ 0.85
CTNNA1P35221 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CTNNA1P35221 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC20.36■□□□□ 0.85
CTNNA1P35221 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CTNNA1P35221 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CTNNA1P35221 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC20.36■□□□□ 0.85
CTNNA1P35221 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CTNNA1P35221 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
CTNNA1P35221 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
CTNNA1P35221 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
CTNNA1P35221 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC20.36■□□□□ 0.85
CTNNA1P35221 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CTNNA1P35221 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC20.36■□□□□ 0.85
CTNNA1P35221 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CTNNA1P35221 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CTNNA1P35221 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC20.36■□□□□ 0.85
CTNNA1P35221 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CTNNA1P35221 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CTNNA1P35221 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CTNNA1P35221 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CTNNA1P35221 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CTNNA1P35221 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC20.36■□□□□ 0.85
CTNNA1P35221 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC20.36■□□□□ 0.85
CTNNA1P35221 AC083906.2-201ENST00000511578 360 ntBASIC20.36■□□□□ 0.85
CTNNA1P35221 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
CTNNA1P35221 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
CTNNA1P35221 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC20.36■□□□□ 0.85
CTNNA1P35221 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC20.36■□□□□ 0.85
CTNNA1P35221 AL121832.2-201ENST00000610979 668 ntBASIC20.36■□□□□ 0.85
CTNNA1P35221 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC20.36■□□□□ 0.85
CTNNA1P35221 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CTNNA1P35221 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC20.36■□□□□ 0.85
CTNNA1P35221 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC20.36■□□□□ 0.85
CTNNA1P35221 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CTNNA1P35221 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CTNNA1P35221 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CTNNA1P35221 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CTNNA1P35221 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC20.35■□□□□ 0.85
CTNNA1P35221 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CTNNA1P35221 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC20.35■□□□□ 0.85
CTNNA1P35221 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CTNNA1P35221 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
CTNNA1P35221 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC20.35■□□□□ 0.85
CTNNA1P35221 GLI3-203ENST00000437480 451 ntTSL 2 BASIC20.35■□□□□ 0.85
CTNNA1P35221 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC20.35■□□□□ 0.85
CTNNA1P35221 AC091874.3-201ENST00000512672 1195 ntBASIC20.35■□□□□ 0.85
CTNNA1P35221 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC20.35■□□□□ 0.85
CTNNA1P35221 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC20.35■□□□□ 0.85
CTNNA1P35221 AC006557.6-201ENST00000623071 864 ntBASIC20.35■□□□□ 0.85
CTNNA1P35221 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
CTNNA1P35221 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
CTNNA1P35221 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CTNNA1P35221 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC20.35■□□□□ 0.85
CTNNA1P35221 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CTNNA1P35221 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CTNNA1P35221 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC20.35■□□□□ 0.85
CTNNA1P35221 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
CTNNA1P35221 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CTNNA1P35221 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CTNNA1P35221 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CTNNA1P35221 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CTNNA1P35221 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CTNNA1P35221 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
CTNNA1P35221 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CTNNA1P35221 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC20.34■□□□□ 0.85
CTNNA1P35221 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
CTNNA1P35221 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CTNNA1P35221 GUSBP6-202ENST00000438529 1198 ntBASIC20.34■□□□□ 0.85
CTNNA1P35221 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC20.34■□□□□ 0.85
CTNNA1P35221 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CTNNA1P35221 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CTNNA1P35221 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CTNNA1P35221 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC20.34■□□□□ 0.85
CTNNA1P35221 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC20.34■□□□□ 0.85
CTNNA1P35221 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CTNNA1P35221 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CTNNA1P35221 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC20.34■□□□□ 0.85
CTNNA1P35221 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CTNNA1P35221 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CTNNA1P35221 AL049812.1-201ENST00000432563 2267 ntBASIC20.33■□□□□ 0.85
CTNNA1P35221 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
CTNNA1P35221 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CTNNA1P35221 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CTNNA1P35221 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
CTNNA1P35221 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CTNNA1P35221 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
CTNNA1P35221 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
CTNNA1P35221 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
CTNNA1P35221 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC20.33■□□□□ 0.85
CTNNA1P35221 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC20.33■□□□□ 0.85
CTNNA1P35221 RPS2P52-201ENST00000469610 820 ntBASIC20.33■□□□□ 0.85
CTNNA1P35221 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CTNNA1P35221 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC20.33■□□□□ 0.85
CTNNA1P35221 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.85
CTNNA1P35221 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC20.33■□□□□ 0.85
CTNNA1P35221 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
CTNNA1P35221 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CTNNA1P35221 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CTNNA1P35221 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC20.33■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 52.3 ms