Protein–RNA interactions for Protein: P29279

CTGF, Connective tissue growth factor, humanhuman

Predictions only

Length 349 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTGFP29279 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC21.85■■□□□ 1.09
CTGFP29279 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
CTGFP29279 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CTGFP29279 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CTGFP29279 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
CTGFP29279 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC21.84■■□□□ 1.09
CTGFP29279 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
CTGFP29279 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CTGFP29279 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CTGFP29279 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC21.84■■□□□ 1.09
CTGFP29279 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
CTGFP29279 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC21.84■■□□□ 1.09
CTGFP29279 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC21.84■■□□□ 1.09
CTGFP29279 CALM1-205ENST00000553542 877 ntTSL 5 BASIC21.84■■□□□ 1.09
CTGFP29279 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
CTGFP29279 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC21.84■■□□□ 1.09
CTGFP29279 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC21.84■■□□□ 1.09
CTGFP29279 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.09
CTGFP29279 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
CTGFP29279 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
CTGFP29279 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
CTGFP29279 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC21.83■■□□□ 1.09
CTGFP29279 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
CTGFP29279 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
CTGFP29279 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC21.83■■□□□ 1.09
CTGFP29279 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
CTGFP29279 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC21.83■■□□□ 1.09
CTGFP29279 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC21.83■■□□□ 1.09
CTGFP29279 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC21.83■■□□□ 1.09
CTGFP29279 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC21.83■■□□□ 1.09
CTGFP29279 AC079602.3-201ENST00000623931 403 ntBASIC21.83■■□□□ 1.09
CTGFP29279 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC21.83■■□□□ 1.09
CTGFP29279 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC21.83■■□□□ 1.09
CTGFP29279 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC21.83■■□□□ 1.09
CTGFP29279 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
CTGFP29279 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC21.83■■□□□ 1.08
CTGFP29279 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CTGFP29279 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
CTGFP29279 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CTGFP29279 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CTGFP29279 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CTGFP29279 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC21.82■■□□□ 1.08
CTGFP29279 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC21.82■■□□□ 1.08
CTGFP29279 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC21.82■■□□□ 1.08
CTGFP29279 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
CTGFP29279 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
CTGFP29279 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
CTGFP29279 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC21.82■■□□□ 1.08
CTGFP29279 AL160237.2-201ENST00000556165 472 ntBASIC21.82■■□□□ 1.08
CTGFP29279 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
CTGFP29279 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
CTGFP29279 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC21.82■■□□□ 1.08
CTGFP29279 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC21.82■■□□□ 1.08
CTGFP29279 WDR6-223ENST00000627177 207 ntTSL 2 BASIC21.82■■□□□ 1.08
CTGFP29279 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC21.82■■□□□ 1.08
CTGFP29279 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CTGFP29279 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC21.82■■□□□ 1.08
CTGFP29279 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CTGFP29279 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
CTGFP29279 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC21.81■■□□□ 1.08
CTGFP29279 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC21.81■■□□□ 1.08
CTGFP29279 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC21.81■■□□□ 1.08
CTGFP29279 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC21.81■■□□□ 1.08
CTGFP29279 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CTGFP29279 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC21.81■■□□□ 1.08
CTGFP29279 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC21.81■■□□□ 1.08
CTGFP29279 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
CTGFP29279 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
CTGFP29279 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CTGFP29279 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CTGFP29279 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC21.81■■□□□ 1.08
CTGFP29279 AC024243.1-201ENST00000609234 778 ntBASIC21.81■■□□□ 1.08
CTGFP29279 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC21.81■■□□□ 1.08
CTGFP29279 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC21.81■■□□□ 1.08
CTGFP29279 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CTGFP29279 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
CTGFP29279 AL162741.1-201ENST00000565563 1558 ntBASIC21.81■■□□□ 1.08
CTGFP29279 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC21.81■■□□□ 1.08
CTGFP29279 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC21.81■■□□□ 1.08
CTGFP29279 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC21.81■■□□□ 1.08
CTGFP29279 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
CTGFP29279 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC21.8■■□□□ 1.08
CTGFP29279 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CTGFP29279 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CTGFP29279 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CTGFP29279 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC21.8■■□□□ 1.08
CTGFP29279 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CTGFP29279 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC21.8■■□□□ 1.08
CTGFP29279 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC21.8■■□□□ 1.08
CTGFP29279 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
CTGFP29279 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CTGFP29279 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CTGFP29279 AP000593.1-201ENST00000393668 712 ntBASIC21.8■■□□□ 1.08
CTGFP29279 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC21.8■■□□□ 1.08
CTGFP29279 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC21.8■■□□□ 1.08
CTGFP29279 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CTGFP29279 KRT8P26-201ENST00000534154 1276 ntBASIC21.8■■□□□ 1.08
CTGFP29279 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
CTGFP29279 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
CTGFP29279 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC21.8■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms