Protein–RNA interactions for Protein: P28472

GABRB3, Gamma-aminobutyric acid receptor subunit beta-3, humanhuman

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3P28472 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC19.19■□□□□ 0.66
GABRB3P28472 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
GABRB3P28472 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
GABRB3P28472 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
GABRB3P28472 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
GABRB3P28472 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC19.19■□□□□ 0.66
GABRB3P28472 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
GABRB3P28472 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC19.19■□□□□ 0.66
GABRB3P28472 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
GABRB3P28472 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
GABRB3P28472 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
GABRB3P28472 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
GABRB3P28472 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC19.18■□□□□ 0.66
GABRB3P28472 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
GABRB3P28472 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
GABRB3P28472 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC19.18■□□□□ 0.66
GABRB3P28472 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC19.18■□□□□ 0.66
GABRB3P28472 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC19.18■□□□□ 0.66
GABRB3P28472 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC19.18■□□□□ 0.66
GABRB3P28472 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
GABRB3P28472 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
GABRB3P28472 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
GABRB3P28472 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC19.18■□□□□ 0.66
GABRB3P28472 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC19.18■□□□□ 0.66
GABRB3P28472 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC19.18■□□□□ 0.66
GABRB3P28472 AC233263.1-201ENST00000578059 224 ntBASIC19.18■□□□□ 0.66
GABRB3P28472 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
GABRB3P28472 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
GABRB3P28472 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC19.18■□□□□ 0.66
GABRB3P28472 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
GABRB3P28472 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC19.18■□□□□ 0.66
GABRB3P28472 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
GABRB3P28472 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
GABRB3P28472 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
GABRB3P28472 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC19.18■□□□□ 0.66
GABRB3P28472 IRX1P1-201ENST00000438849 1838 ntBASIC19.18■□□□□ 0.66
GABRB3P28472 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
GABRB3P28472 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
GABRB3P28472 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
GABRB3P28472 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
GABRB3P28472 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
GABRB3P28472 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
GABRB3P28472 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
GABRB3P28472 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
GABRB3P28472 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
GABRB3P28472 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC19.17■□□□□ 0.66
GABRB3P28472 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
GABRB3P28472 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
GABRB3P28472 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
GABRB3P28472 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
GABRB3P28472 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
GABRB3P28472 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC19.17■□□□□ 0.66
GABRB3P28472 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC19.17■□□□□ 0.66
GABRB3P28472 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
GABRB3P28472 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC19.17■□□□□ 0.66
GABRB3P28472 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
GABRB3P28472 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC19.17■□□□□ 0.66
GABRB3P28472 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
GABRB3P28472 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC19.17■□□□□ 0.66
GABRB3P28472 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC19.17■□□□□ 0.66
GABRB3P28472 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
GABRB3P28472 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
GABRB3P28472 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
GABRB3P28472 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
GABRB3P28472 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
GABRB3P28472 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC19.17■□□□□ 0.66
GABRB3P28472 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
GABRB3P28472 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC19.17■□□□□ 0.66
GABRB3P28472 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC19.16■□□□□ 0.66
GABRB3P28472 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC19.16■□□□□ 0.66
GABRB3P28472 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
GABRB3P28472 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
GABRB3P28472 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
GABRB3P28472 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
GABRB3P28472 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
GABRB3P28472 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
GABRB3P28472 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC19.16■□□□□ 0.66
GABRB3P28472 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
GABRB3P28472 RNA5SP413-201ENST00000516373 109 ntBASIC19.16■□□□□ 0.66
GABRB3P28472 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC19.16■□□□□ 0.66
GABRB3P28472 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC19.16■□□□□ 0.66
GABRB3P28472 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC19.16■□□□□ 0.66
GABRB3P28472 MTDHP1-201ENST00000605323 784 ntBASIC19.16■□□□□ 0.66
GABRB3P28472 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC19.16■□□□□ 0.66
GABRB3P28472 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
GABRB3P28472 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC19.16■□□□□ 0.66
GABRB3P28472 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
GABRB3P28472 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
GABRB3P28472 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
GABRB3P28472 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC19.16■□□□□ 0.66
GABRB3P28472 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC19.16■□□□□ 0.66
GABRB3P28472 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
GABRB3P28472 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
GABRB3P28472 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
GABRB3P28472 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
GABRB3P28472 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
GABRB3P28472 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC19.15■□□□□ 0.66
GABRB3P28472 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC19.15■□□□□ 0.66
GABRB3P28472 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
GABRB3P28472 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms