Protein–RNA interactions for Protein: P27539

GDF1, Embryonic growth/differentiation factor 1, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDF1P27539 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
GDF1P27539 KRT8P9-201ENST00000558927 1449 ntBASIC17.53■□□□□ 0.4
GDF1P27539 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC17.53■□□□□ 0.4
GDF1P27539 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
GDF1P27539 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
GDF1P27539 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
GDF1P27539 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
GDF1P27539 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
GDF1P27539 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
GDF1P27539 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC17.52■□□□□ 0.4
GDF1P27539 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
GDF1P27539 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
GDF1P27539 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC17.52■□□□□ 0.4
GDF1P27539 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
GDF1P27539 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC17.52■□□□□ 0.4
GDF1P27539 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
GDF1P27539 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
GDF1P27539 DERL1-203ENST00000419562 918 ntTSL 2 BASIC17.52■□□□□ 0.4
GDF1P27539 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC17.52■□□□□ 0.4
GDF1P27539 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC17.52■□□□□ 0.4
GDF1P27539 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC17.52■□□□□ 0.4
GDF1P27539 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC17.52■□□□□ 0.4
GDF1P27539 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC17.52■□□□□ 0.4
GDF1P27539 AC130371.2-201ENST00000619443 611 ntBASIC17.52■□□□□ 0.4
GDF1P27539 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC17.52■□□□□ 0.4
GDF1P27539 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
GDF1P27539 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
GDF1P27539 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
GDF1P27539 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
GDF1P27539 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.39
GDF1P27539 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
GDF1P27539 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC17.51■□□□□ 0.39
GDF1P27539 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
GDF1P27539 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
GDF1P27539 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
GDF1P27539 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC17.51■□□□□ 0.39
GDF1P27539 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
GDF1P27539 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC17.51■□□□□ 0.39
GDF1P27539 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
GDF1P27539 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
GDF1P27539 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
GDF1P27539 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
GDF1P27539 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
GDF1P27539 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
GDF1P27539 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC17.51■□□□□ 0.39
GDF1P27539 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
GDF1P27539 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
GDF1P27539 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
GDF1P27539 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC17.51■□□□□ 0.39
GDF1P27539 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
GDF1P27539 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
GDF1P27539 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC17.51■□□□□ 0.39
GDF1P27539 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
GDF1P27539 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC17.51■□□□□ 0.39
GDF1P27539 AC091390.4-202ENST00000476426 537 ntBASIC17.51■□□□□ 0.39
GDF1P27539 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC17.51■□□□□ 0.39
GDF1P27539 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC17.51■□□□□ 0.39
GDF1P27539 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC17.51■□□□□ 0.39
GDF1P27539 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC17.51■□□□□ 0.39
GDF1P27539 AP000692.2-201ENST00000608391 879 ntBASIC17.51■□□□□ 0.39
GDF1P27539 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC17.51■□□□□ 0.39
GDF1P27539 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
GDF1P27539 AC138932.1-201ENST00000534164 6830 ntBASIC17.51■□□□□ 0.39
GDF1P27539 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
GDF1P27539 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
GDF1P27539 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
GDF1P27539 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
GDF1P27539 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC17.5■□□□□ 0.39
GDF1P27539 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC17.5■□□□□ 0.39
GDF1P27539 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
GDF1P27539 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
GDF1P27539 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
GDF1P27539 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC17.5■□□□□ 0.39
GDF1P27539 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC17.5■□□□□ 0.39
GDF1P27539 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
GDF1P27539 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
GDF1P27539 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
GDF1P27539 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
GDF1P27539 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC17.5■□□□□ 0.39
GDF1P27539 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC17.5■□□□□ 0.39
GDF1P27539 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
GDF1P27539 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC17.5■□□□□ 0.39
GDF1P27539 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC17.5■□□□□ 0.39
GDF1P27539 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
GDF1P27539 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
GDF1P27539 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC17.5■□□□□ 0.39
GDF1P27539 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC17.5■□□□□ 0.39
GDF1P27539 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
GDF1P27539 C2orf69P3-201ENST00000565542 1120 ntBASIC17.5■□□□□ 0.39
GDF1P27539 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC17.5■□□□□ 0.39
GDF1P27539 AP005242.2-201ENST00000580065 1175 ntBASIC17.5■□□□□ 0.39
GDF1P27539 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
GDF1P27539 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC17.5■□□□□ 0.39
GDF1P27539 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC17.5■□□□□ 0.39
GDF1P27539 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC17.5■□□□□ 0.39
GDF1P27539 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
GDF1P27539 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC17.5■□□□□ 0.39
GDF1P27539 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
GDF1P27539 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC17.5■□□□□ 0.39
GDF1P27539 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms