Protein–RNA interactions for Protein: P20807

CAPN3, Calpain-3, humanhuman

Predictions only

Length 821 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3P20807 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC18.57■□□□□ 0.56
CAPN3P20807 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CAPN3P20807 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
CAPN3P20807 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CAPN3P20807 PPP1R14BP2-201ENST00000426284 444 ntBASIC18.57■□□□□ 0.56
CAPN3P20807 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC18.57■□□□□ 0.56
CAPN3P20807 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC18.57■□□□□ 0.56
CAPN3P20807 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CAPN3P20807 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC18.57■□□□□ 0.56
CAPN3P20807 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC18.57■□□□□ 0.56
CAPN3P20807 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC18.57■□□□□ 0.56
CAPN3P20807 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
CAPN3P20807 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CAPN3P20807 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CAPN3P20807 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
CAPN3P20807 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC18.57■□□□□ 0.56
CAPN3P20807 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
CAPN3P20807 USP49-202ENST00000373010 2446 ntTSL 5 BASIC18.57■□□□□ 0.56
CAPN3P20807 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC18.56■□□□□ 0.56
CAPN3P20807 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CAPN3P20807 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CAPN3P20807 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC18.56■□□□□ 0.56
CAPN3P20807 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
CAPN3P20807 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CAPN3P20807 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CAPN3P20807 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC18.56■□□□□ 0.56
CAPN3P20807 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC18.56■□□□□ 0.56
CAPN3P20807 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CAPN3P20807 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC18.56■□□□□ 0.56
CAPN3P20807 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
CAPN3P20807 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC18.56■□□□□ 0.56
CAPN3P20807 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
CAPN3P20807 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC18.56■□□□□ 0.56
CAPN3P20807 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC18.56■□□□□ 0.56
CAPN3P20807 AC098934.4-201ENST00000564127 592 ntBASIC18.56■□□□□ 0.56
CAPN3P20807 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
CAPN3P20807 AC008694.1-202ENST00000636953 945 ntBASIC18.56■□□□□ 0.56
CAPN3P20807 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
CAPN3P20807 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CAPN3P20807 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
CAPN3P20807 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
CAPN3P20807 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CAPN3P20807 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CAPN3P20807 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC18.56■□□□□ 0.56
CAPN3P20807 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
CAPN3P20807 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC18.55■□□□□ 0.56
CAPN3P20807 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CAPN3P20807 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
CAPN3P20807 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CAPN3P20807 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC18.55■□□□□ 0.56
CAPN3P20807 ZNF815P-204ENST00000434898 1737 ntBASIC18.55■□□□□ 0.56
CAPN3P20807 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
CAPN3P20807 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CAPN3P20807 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
CAPN3P20807 AC005082.1-201ENST00000413042 2259 ntBASIC18.55■□□□□ 0.56
CAPN3P20807 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
CAPN3P20807 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC18.55■□□□□ 0.56
CAPN3P20807 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CAPN3P20807 MIPEPP3-201ENST00000412105 444 ntBASIC18.55■□□□□ 0.56
CAPN3P20807 AC093787.1-201ENST00000450396 207 ntBASIC18.55■□□□□ 0.56
CAPN3P20807 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC18.55■□□□□ 0.56
CAPN3P20807 SERP1-205ENST00000487153 657 ntTSL 4 BASIC18.55■□□□□ 0.56
CAPN3P20807 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CAPN3P20807 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
CAPN3P20807 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC18.55■□□□□ 0.56
CAPN3P20807 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC18.55■□□□□ 0.56
CAPN3P20807 AC026471.1-201ENST00000564629 3026 ntBASIC18.55■□□□□ 0.56
CAPN3P20807 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
CAPN3P20807 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CAPN3P20807 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
CAPN3P20807 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CAPN3P20807 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC18.55■□□□□ 0.56
CAPN3P20807 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CAPN3P20807 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
CAPN3P20807 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
CAPN3P20807 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CAPN3P20807 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CAPN3P20807 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC18.54■□□□□ 0.56
CAPN3P20807 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CAPN3P20807 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CAPN3P20807 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
CAPN3P20807 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CAPN3P20807 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CAPN3P20807 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CAPN3P20807 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
CAPN3P20807 AC098590.1-201ENST00000468126 897 ntBASIC18.54■□□□□ 0.56
CAPN3P20807 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CAPN3P20807 ADM-205ENST00000528544 586 ntTSL 2 BASIC18.54■□□□□ 0.56
CAPN3P20807 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC18.54■□□□□ 0.56
CAPN3P20807 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CAPN3P20807 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC18.54■□□□□ 0.56
CAPN3P20807 OR10C1-204ENST00000622521 1039 ntBASIC18.54■□□□□ 0.56
CAPN3P20807 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC18.54■□□□□ 0.56
CAPN3P20807 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CAPN3P20807 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CAPN3P20807 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
CAPN3P20807 TFP1-202ENST00000475455 1573 ntBASIC18.54■□□□□ 0.56
CAPN3P20807 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CAPN3P20807 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
CAPN3P20807 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms