Protein–RNA interactions for Protein: P18846

ATF1, Cyclic AMP-dependent transcription factor ATF-1, humanhuman

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF1P18846 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
ATF1P18846 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
ATF1P18846 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
ATF1P18846 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
ATF1P18846 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
ATF1P18846 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
ATF1P18846 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
ATF1P18846 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
ATF1P18846 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
ATF1P18846 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC16.94■□□□□ 0.3
ATF1P18846 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC16.94■□□□□ 0.3
ATF1P18846 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC16.94■□□□□ 0.3
ATF1P18846 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC16.94■□□□□ 0.3
ATF1P18846 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
ATF1P18846 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC16.94■□□□□ 0.3
ATF1P18846 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC16.94■□□□□ 0.3
ATF1P18846 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC16.94■□□□□ 0.3
ATF1P18846 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
ATF1P18846 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC16.94■□□□□ 0.3
ATF1P18846 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
ATF1P18846 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
ATF1P18846 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC16.94■□□□□ 0.3
ATF1P18846 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC16.94■□□□□ 0.3
ATF1P18846 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
ATF1P18846 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
ATF1P18846 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
ATF1P18846 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
ATF1P18846 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
ATF1P18846 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
ATF1P18846 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
ATF1P18846 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC16.94■□□□□ 0.3
ATF1P18846 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
ATF1P18846 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
ATF1P18846 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC16.93■□□□□ 0.3
ATF1P18846 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
ATF1P18846 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
ATF1P18846 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
ATF1P18846 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
ATF1P18846 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
ATF1P18846 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC16.93■□□□□ 0.3
ATF1P18846 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
ATF1P18846 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
ATF1P18846 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
ATF1P18846 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
ATF1P18846 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
ATF1P18846 AL031598.1-201ENST00000561511 1773 ntBASIC16.93■□□□□ 0.3
ATF1P18846 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
ATF1P18846 AC133552.2-202ENST00000575694 574 ntBASIC16.93■□□□□ 0.3
ATF1P18846 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
ATF1P18846 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
ATF1P18846 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
ATF1P18846 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
ATF1P18846 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
ATF1P18846 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
ATF1P18846 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC16.93■□□□□ 0.3
ATF1P18846 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
ATF1P18846 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
ATF1P18846 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC16.93■□□□□ 0.3
ATF1P18846 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
ATF1P18846 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
ATF1P18846 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC16.92■□□□□ 0.3
ATF1P18846 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
ATF1P18846 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
ATF1P18846 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC16.92■□□□□ 0.3
ATF1P18846 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC16.92■□□□□ 0.3
ATF1P18846 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
ATF1P18846 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
ATF1P18846 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC16.92■□□□□ 0.3
ATF1P18846 GPX1P1-201ENST00000388829 606 ntBASIC16.92■□□□□ 0.3
ATF1P18846 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
ATF1P18846 SERP1-205ENST00000487153 657 ntTSL 4 BASIC16.92■□□□□ 0.3
ATF1P18846 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
ATF1P18846 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC16.92■□□□□ 0.3
ATF1P18846 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
ATF1P18846 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC16.92■□□□□ 0.3
ATF1P18846 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC16.92■□□□□ 0.3
ATF1P18846 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
ATF1P18846 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC16.92■□□□□ 0.3
ATF1P18846 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
ATF1P18846 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC16.92■□□□□ 0.3
ATF1P18846 PCDHB18P-201ENST00000524813 2368 ntBASIC16.92■□□□□ 0.3
ATF1P18846 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
ATF1P18846 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC16.91■□□□□ 0.3
ATF1P18846 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
ATF1P18846 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
ATF1P18846 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC16.91■□□□□ 0.3
ATF1P18846 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
ATF1P18846 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
ATF1P18846 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
ATF1P18846 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
ATF1P18846 MOK-233ENST00000524214 1539 ntTSL 2 BASIC16.91■□□□□ 0.3
ATF1P18846 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC16.91■□□□□ 0.3
ATF1P18846 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC16.91■□□□□ 0.3
ATF1P18846 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
ATF1P18846 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
ATF1P18846 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
ATF1P18846 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
ATF1P18846 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC16.91■□□□□ 0.3
ATF1P18846 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC16.91■□□□□ 0.3
ATF1P18846 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 52.5 ms