Protein–RNA interactions for Protein: P07384

CAPN1, Calpain-1 catalytic subunit, humanhuman

Predictions only

Length 714 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1P07384 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CAPN1P07384 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CAPN1P07384 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CAPN1P07384 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC18.99■□□□□ 0.63
CAPN1P07384 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CAPN1P07384 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CAPN1P07384 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CAPN1P07384 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CAPN1P07384 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
CAPN1P07384 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CAPN1P07384 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
CAPN1P07384 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CAPN1P07384 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CAPN1P07384 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CAPN1P07384 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
CAPN1P07384 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CAPN1P07384 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC18.98■□□□□ 0.63
CAPN1P07384 MIR718-201ENST00000390190 70 ntBASIC18.98■□□□□ 0.63
CAPN1P07384 CALM3-202ENST00000391918 702 ntTSL 2 BASIC18.98■□□□□ 0.63
CAPN1P07384 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
CAPN1P07384 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC18.98■□□□□ 0.63
CAPN1P07384 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CAPN1P07384 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
CAPN1P07384 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CAPN1P07384 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CAPN1P07384 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CAPN1P07384 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC18.98■□□□□ 0.63
CAPN1P07384 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC18.98■□□□□ 0.63
CAPN1P07384 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CAPN1P07384 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC18.98■□□□□ 0.63
CAPN1P07384 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC18.97■□□□□ 0.63
CAPN1P07384 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
CAPN1P07384 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC18.97■□□□□ 0.63
CAPN1P07384 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
CAPN1P07384 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
CAPN1P07384 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
CAPN1P07384 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CAPN1P07384 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC18.97■□□□□ 0.63
CAPN1P07384 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CAPN1P07384 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC18.97■□□□□ 0.63
CAPN1P07384 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC18.97■□□□□ 0.63
CAPN1P07384 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC18.97■□□□□ 0.63
CAPN1P07384 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC18.97■□□□□ 0.63
CAPN1P07384 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
CAPN1P07384 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC18.97■□□□□ 0.63
CAPN1P07384 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CAPN1P07384 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
CAPN1P07384 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CAPN1P07384 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC18.97■□□□□ 0.63
CAPN1P07384 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
CAPN1P07384 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
CAPN1P07384 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC18.97■□□□□ 0.63
CAPN1P07384 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CAPN1P07384 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CAPN1P07384 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CAPN1P07384 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CAPN1P07384 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
CAPN1P07384 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC18.96■□□□□ 0.63
CAPN1P07384 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CAPN1P07384 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CAPN1P07384 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CAPN1P07384 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CAPN1P07384 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC18.96■□□□□ 0.63
CAPN1P07384 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC18.96■□□□□ 0.63
CAPN1P07384 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC18.96■□□□□ 0.63
CAPN1P07384 MIR4497-201ENST00000583208 89 ntBASIC18.96■□□□□ 0.63
CAPN1P07384 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
CAPN1P07384 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
CAPN1P07384 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CAPN1P07384 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC18.96■□□□□ 0.63
CAPN1P07384 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CAPN1P07384 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC18.96■□□□□ 0.63
CAPN1P07384 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CAPN1P07384 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CAPN1P07384 AC120498.9-201ENST00000339021 3867 ntBASIC18.96■□□□□ 0.63
CAPN1P07384 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC18.96■□□□□ 0.63
CAPN1P07384 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC18.96■□□□□ 0.63
CAPN1P07384 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CAPN1P07384 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC18.96■□□□□ 0.63
CAPN1P07384 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
CAPN1P07384 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC18.95■□□□□ 0.62
CAPN1P07384 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CAPN1P07384 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
CAPN1P07384 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CAPN1P07384 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
CAPN1P07384 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC18.95■□□□□ 0.62
CAPN1P07384 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC18.95■□□□□ 0.62
CAPN1P07384 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
CAPN1P07384 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
CAPN1P07384 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC18.95■□□□□ 0.62
CAPN1P07384 TFP1-202ENST00000475455 1573 ntBASIC18.95■□□□□ 0.62
CAPN1P07384 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CAPN1P07384 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CAPN1P07384 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
CAPN1P07384 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CAPN1P07384 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CAPN1P07384 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CAPN1P07384 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CAPN1P07384 TK2-204ENST00000525974 1178 ntTSL 2 BASIC18.95■□□□□ 0.62
CAPN1P07384 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC18.95■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms