Protein–RNA interactions for Protein: P05114

HMGN1, Non-histone chromosomal protein HMG-14, humanhuman

Predictions only

Length 100 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P05114 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
HMGN1P05114 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
HMGN1P05114 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC17.48■□□□□ 0.39
HMGN1P05114 AL049812.1-201ENST00000432563 2267 ntBASIC17.48■□□□□ 0.39
HMGN1P05114 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC17.48■□□□□ 0.39
HMGN1P05114 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC17.48■□□□□ 0.39
HMGN1P05114 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC17.48■□□□□ 0.39
HMGN1P05114 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC17.48■□□□□ 0.39
HMGN1P05114 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
HMGN1P05114 AC079598.2-202ENST00000546624 1451 ntBASIC17.48■□□□□ 0.39
HMGN1P05114 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
HMGN1P05114 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HMGN1P05114 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
HMGN1P05114 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HMGN1P05114 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
HMGN1P05114 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC17.48■□□□□ 0.39
HMGN1P05114 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
HMGN1P05114 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
HMGN1P05114 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC17.47■□□□□ 0.39
HMGN1P05114 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
HMGN1P05114 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
HMGN1P05114 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
HMGN1P05114 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
HMGN1P05114 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
HMGN1P05114 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
HMGN1P05114 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC17.47■□□□□ 0.39
HMGN1P05114 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
HMGN1P05114 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
HMGN1P05114 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
HMGN1P05114 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
HMGN1P05114 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
HMGN1P05114 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
HMGN1P05114 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC17.47■□□□□ 0.39
HMGN1P05114 AC093787.1-201ENST00000450396 207 ntBASIC17.47■□□□□ 0.39
HMGN1P05114 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
HMGN1P05114 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
HMGN1P05114 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC17.47■□□□□ 0.39
HMGN1P05114 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
HMGN1P05114 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
HMGN1P05114 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC17.47■□□□□ 0.39
HMGN1P05114 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
HMGN1P05114 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
HMGN1P05114 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
HMGN1P05114 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC17.47■□□□□ 0.39
HMGN1P05114 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
HMGN1P05114 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
HMGN1P05114 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC17.46■□□□□ 0.39
HMGN1P05114 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
HMGN1P05114 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
HMGN1P05114 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
HMGN1P05114 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
HMGN1P05114 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC17.46■□□□□ 0.39
HMGN1P05114 AC073210.2-201ENST00000430369 194 ntBASIC17.46■□□□□ 0.39
HMGN1P05114 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC17.46■□□□□ 0.39
HMGN1P05114 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
HMGN1P05114 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC17.46■□□□□ 0.39
HMGN1P05114 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
HMGN1P05114 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
HMGN1P05114 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
HMGN1P05114 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC17.46■□□□□ 0.39
HMGN1P05114 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
HMGN1P05114 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
HMGN1P05114 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC17.45■□□□□ 0.38
HMGN1P05114 ADK-206ENST00000541550 2222 ntTSL 2 BASIC17.45■□□□□ 0.38
HMGN1P05114 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC17.45■□□□□ 0.38
HMGN1P05114 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
HMGN1P05114 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
HMGN1P05114 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC17.45■□□□□ 0.38
HMGN1P05114 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
HMGN1P05114 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
HMGN1P05114 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
HMGN1P05114 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
HMGN1P05114 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
HMGN1P05114 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
HMGN1P05114 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
HMGN1P05114 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC17.45■□□□□ 0.38
HMGN1P05114 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC17.45■□□□□ 0.38
HMGN1P05114 MAZ-216ENST00000616501 991 ntTSL 5 BASIC17.45■□□□□ 0.38
HMGN1P05114 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
HMGN1P05114 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC17.45■□□□□ 0.38
HMGN1P05114 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
HMGN1P05114 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
HMGN1P05114 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
HMGN1P05114 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC17.45■□□□□ 0.38
HMGN1P05114 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
HMGN1P05114 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
HMGN1P05114 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
HMGN1P05114 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
HMGN1P05114 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
HMGN1P05114 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
HMGN1P05114 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
HMGN1P05114 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
HMGN1P05114 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
HMGN1P05114 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC17.44■□□□□ 0.38
HMGN1P05114 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
HMGN1P05114 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC17.44■□□□□ 0.38
HMGN1P05114 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC17.44■□□□□ 0.38
HMGN1P05114 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC17.44■□□□□ 0.38
HMGN1P05114 AC005181.1-201ENST00000604782 1256 ntBASIC17.44■□□□□ 0.38
HMGN1P05114 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 17.1 ms