Protein–RNA interactions for Protein: O95741

CPNE6, Copine-6, humanhuman

Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE6O95741 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CPNE6O95741 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC18.95■□□□□ 0.62
CPNE6O95741 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CPNE6O95741 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
CPNE6O95741 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC18.95■□□□□ 0.62
CPNE6O95741 KRT8P9-201ENST00000558927 1449 ntBASIC18.95■□□□□ 0.62
CPNE6O95741 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CPNE6O95741 TUBB8P6-201ENST00000436895 1288 ntBASIC18.95■□□□□ 0.62
CPNE6O95741 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CPNE6O95741 NAPSB-206ENST00000562112 1266 ntBASIC18.95■□□□□ 0.62
CPNE6O95741 AC026271.3-201ENST00000571884 352 ntBASIC18.95■□□□□ 0.62
CPNE6O95741 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CPNE6O95741 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CPNE6O95741 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CPNE6O95741 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
CPNE6O95741 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CPNE6O95741 PHGDH-210ENST00000641115 1638 ntBASIC18.95■□□□□ 0.62
CPNE6O95741 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC18.95■□□□□ 0.62
CPNE6O95741 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CPNE6O95741 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CPNE6O95741 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC18.94■□□□□ 0.62
CPNE6O95741 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC18.94■□□□□ 0.62
CPNE6O95741 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
CPNE6O95741 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC18.94■□□□□ 0.62
CPNE6O95741 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CPNE6O95741 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
CPNE6O95741 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CPNE6O95741 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC18.94■□□□□ 0.62
CPNE6O95741 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC18.94■□□□□ 0.62
CPNE6O95741 TMPOP1-202ENST00000424642 1267 ntBASIC18.94■□□□□ 0.62
CPNE6O95741 PPP1R14BP5-201ENST00000440334 435 ntBASIC18.94■□□□□ 0.62
CPNE6O95741 KRT18P16-201ENST00000510337 1294 ntBASIC18.94■□□□□ 0.62
CPNE6O95741 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CPNE6O95741 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC18.94■□□□□ 0.62
CPNE6O95741 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC18.94■□□□□ 0.62
CPNE6O95741 AC005363.2-201ENST00000618631 242 ntBASIC18.94■□□□□ 0.62
CPNE6O95741 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
CPNE6O95741 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CPNE6O95741 FSCN1P1-201ENST00000568912 1481 ntBASIC18.94■□□□□ 0.62
CPNE6O95741 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CPNE6O95741 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
CPNE6O95741 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC18.94■□□□□ 0.62
CPNE6O95741 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CPNE6O95741 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CPNE6O95741 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
CPNE6O95741 LINC01568-207ENST00000641790 1380 ntBASIC18.93■□□□□ 0.62
CPNE6O95741 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CPNE6O95741 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC18.93■□□□□ 0.62
CPNE6O95741 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC18.93■□□□□ 0.62
CPNE6O95741 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CPNE6O95741 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
CPNE6O95741 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CPNE6O95741 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC18.93■□□□□ 0.62
CPNE6O95741 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CPNE6O95741 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CPNE6O95741 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC18.93■□□□□ 0.62
CPNE6O95741 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
CPNE6O95741 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CPNE6O95741 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CPNE6O95741 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CPNE6O95741 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
CPNE6O95741 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC18.93■□□□□ 0.62
CPNE6O95741 AL390955.1-201ENST00000428694 934 ntBASIC18.93■□□□□ 0.62
CPNE6O95741 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
CPNE6O95741 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CPNE6O95741 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC18.93■□□□□ 0.62
CPNE6O95741 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CPNE6O95741 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CPNE6O95741 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
CPNE6O95741 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
CPNE6O95741 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
CPNE6O95741 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CPNE6O95741 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CPNE6O95741 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC18.92■□□□□ 0.62
CPNE6O95741 GOLGA6L3-201ENST00000507199 1679 ntBASIC18.92■□□□□ 0.62
CPNE6O95741 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
CPNE6O95741 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC18.92■□□□□ 0.62
CPNE6O95741 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CPNE6O95741 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
CPNE6O95741 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CPNE6O95741 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
CPNE6O95741 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
CPNE6O95741 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
CPNE6O95741 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CPNE6O95741 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
CPNE6O95741 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC18.92■□□□□ 0.62
CPNE6O95741 RN7SL850P-201ENST00000579959 291 ntBASIC18.92■□□□□ 0.62
CPNE6O95741 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC18.92■□□□□ 0.62
CPNE6O95741 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CPNE6O95741 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC18.92■□□□□ 0.62
CPNE6O95741 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
CPNE6O95741 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
CPNE6O95741 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CPNE6O95741 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CPNE6O95741 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC18.91■□□□□ 0.62
CPNE6O95741 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
CPNE6O95741 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
CPNE6O95741 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC18.91■□□□□ 0.62
CPNE6O95741 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CPNE6O95741 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms