Protein–RNA interactions for Protein: O95260

ATE1, Arginyl-tRNA--protein transferase 1, humanhuman

Predictions only

Length 518 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATE1O95260 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
ATE1O95260 AC012313.1-201ENST00000593393 3059 ntBASIC18.03■□□□□ 0.48
ATE1O95260 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
ATE1O95260 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC18.03■□□□□ 0.48
ATE1O95260 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
ATE1O95260 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC18.03■□□□□ 0.48
ATE1O95260 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
ATE1O95260 AC106820.2-201ENST00000563775 3264 ntBASIC18.03■□□□□ 0.48
ATE1O95260 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC18.02■□□□□ 0.48
ATE1O95260 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
ATE1O95260 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC18.02■□□□□ 0.48
ATE1O95260 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
ATE1O95260 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
ATE1O95260 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC18.02■□□□□ 0.48
ATE1O95260 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
ATE1O95260 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
ATE1O95260 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
ATE1O95260 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
ATE1O95260 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC18.02■□□□□ 0.48
ATE1O95260 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
ATE1O95260 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC18.02■□□□□ 0.48
ATE1O95260 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
ATE1O95260 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC18.02■□□□□ 0.48
ATE1O95260 AC010980.2-201ENST00000587099 1412 ntBASIC18.02■□□□□ 0.48
ATE1O95260 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC18.02■□□□□ 0.48
ATE1O95260 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC18.02■□□□□ 0.48
ATE1O95260 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
ATE1O95260 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
ATE1O95260 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.47
ATE1O95260 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.47
ATE1O95260 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
ATE1O95260 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.47
ATE1O95260 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.47
ATE1O95260 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.47
ATE1O95260 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
ATE1O95260 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
ATE1O95260 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
ATE1O95260 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC18.01■□□□□ 0.47
ATE1O95260 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
ATE1O95260 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
ATE1O95260 USP49-202ENST00000373010 2446 ntTSL 5 BASIC18.01■□□□□ 0.47
ATE1O95260 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
ATE1O95260 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
ATE1O95260 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
ATE1O95260 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
ATE1O95260 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC18.01■□□□□ 0.47
ATE1O95260 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
ATE1O95260 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
ATE1O95260 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC18.01■□□□□ 0.47
ATE1O95260 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
ATE1O95260 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
ATE1O95260 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
ATE1O95260 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
ATE1O95260 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
ATE1O95260 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
ATE1O95260 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
ATE1O95260 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC18.01■□□□□ 0.47
ATE1O95260 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
ATE1O95260 UNC93B4-201ENST00000505679 747 ntBASIC18.01■□□□□ 0.47
ATE1O95260 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC18.01■□□□□ 0.47
ATE1O95260 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC18.01■□□□□ 0.47
ATE1O95260 AL162412.1-201ENST00000567129 965 ntBASIC18.01■□□□□ 0.47
ATE1O95260 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC18.01■□□□□ 0.47
ATE1O95260 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
ATE1O95260 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC18.01■□□□□ 0.47
ATE1O95260 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
ATE1O95260 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
ATE1O95260 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
ATE1O95260 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
ATE1O95260 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC18.01■□□□□ 0.47
ATE1O95260 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
ATE1O95260 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
ATE1O95260 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC18.01■□□□□ 0.47
ATE1O95260 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
ATE1O95260 AC139713.2-201ENST00000641328 2723 ntBASIC18■□□□□ 0.47
ATE1O95260 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
ATE1O95260 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
ATE1O95260 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC18■□□□□ 0.47
ATE1O95260 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC18■□□□□ 0.47
ATE1O95260 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC18■□□□□ 0.47
ATE1O95260 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
ATE1O95260 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC18■□□□□ 0.47
ATE1O95260 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC18■□□□□ 0.47
ATE1O95260 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC18■□□□□ 0.47
ATE1O95260 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
ATE1O95260 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC18■□□□□ 0.47
ATE1O95260 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
ATE1O95260 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
ATE1O95260 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC18■□□□□ 0.47
ATE1O95260 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC18■□□□□ 0.47
ATE1O95260 AC026366.1-201ENST00000488803 879 ntBASIC18■□□□□ 0.47
ATE1O95260 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
ATE1O95260 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC18■□□□□ 0.47
ATE1O95260 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
ATE1O95260 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC18■□□□□ 0.47
ATE1O95260 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
ATE1O95260 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC18■□□□□ 0.47
ATE1O95260 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC18■□□□□ 0.47
ATE1O95260 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
ATE1O95260 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC18■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms