Protein–RNA interactions for Protein: O95243

MBD4, Methyl-CpG-binding domain protein 4, humanhuman

Predictions only

Length 580 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4O95243 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC23.09■■□□□ 1.29
MBD4O95243 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC23.09■■□□□ 1.29
MBD4O95243 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
MBD4O95243 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
MBD4O95243 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC23.09■■□□□ 1.29
MBD4O95243 GLRB-205ENST00000512619 728 ntTSL 3 BASIC23.09■■□□□ 1.29
MBD4O95243 AP005242.2-201ENST00000580065 1175 ntBASIC23.09■■□□□ 1.29
MBD4O95243 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC23.09■■□□□ 1.29
MBD4O95243 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC23.09■■□□□ 1.29
MBD4O95243 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC23.09■■□□□ 1.29
MBD4O95243 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC23.09■■□□□ 1.29
MBD4O95243 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC23.08■■□□□ 1.29
MBD4O95243 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC23.08■■□□□ 1.29
MBD4O95243 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
MBD4O95243 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
MBD4O95243 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
MBD4O95243 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC23.08■■□□□ 1.29
MBD4O95243 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
MBD4O95243 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
MBD4O95243 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC23.08■■□□□ 1.29
MBD4O95243 GRAMD4P8-201ENST00000605465 1115 ntBASIC23.08■■□□□ 1.29
MBD4O95243 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC23.08■■□□□ 1.29
MBD4O95243 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
MBD4O95243 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
MBD4O95243 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC23.08■■□□□ 1.28
MBD4O95243 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
MBD4O95243 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC23.08■■□□□ 1.28
MBD4O95243 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
MBD4O95243 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC23.07■■□□□ 1.28
MBD4O95243 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC23.07■■□□□ 1.28
MBD4O95243 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
MBD4O95243 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
MBD4O95243 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
MBD4O95243 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
MBD4O95243 MFAP1P1-201ENST00000442257 1255 ntBASIC23.07■■□□□ 1.28
MBD4O95243 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC23.07■■□□□ 1.28
MBD4O95243 AC010947.1-201ENST00000623454 693 ntBASIC23.07■■□□□ 1.28
MBD4O95243 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
MBD4O95243 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
MBD4O95243 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
MBD4O95243 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
MBD4O95243 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC23.07■■□□□ 1.28
MBD4O95243 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
MBD4O95243 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC23.07■■□□□ 1.28
MBD4O95243 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
MBD4O95243 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC23.06■■□□□ 1.28
MBD4O95243 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC23.06■■□□□ 1.28
MBD4O95243 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC23.06■■□□□ 1.28
MBD4O95243 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
MBD4O95243 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC23.06■■□□□ 1.28
MBD4O95243 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC23.06■■□□□ 1.28
MBD4O95243 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
MBD4O95243 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
MBD4O95243 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC23.06■■□□□ 1.28
MBD4O95243 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
MBD4O95243 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC23.06■■□□□ 1.28
MBD4O95243 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC23.06■■□□□ 1.28
MBD4O95243 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
MBD4O95243 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC23.06■■□□□ 1.28
MBD4O95243 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC23.06■■□□□ 1.28
MBD4O95243 LINC01023-201ENST00000606054 436 ntBASIC23.06■■□□□ 1.28
MBD4O95243 AC012306.2-201ENST00000609350 630 ntBASIC23.06■■□□□ 1.28
MBD4O95243 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC23.06■■□□□ 1.28
MBD4O95243 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC23.06■■□□□ 1.28
MBD4O95243 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC23.06■■□□□ 1.28
MBD4O95243 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
MBD4O95243 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC23.05■■□□□ 1.28
MBD4O95243 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
MBD4O95243 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
MBD4O95243 AC096733.2-201ENST00000609937 1394 ntBASIC23.05■■□□□ 1.28
MBD4O95243 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC23.05■■□□□ 1.28
MBD4O95243 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC23.05■■□□□ 1.28
MBD4O95243 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC23.05■■□□□ 1.28
MBD4O95243 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC23.05■■□□□ 1.28
MBD4O95243 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
MBD4O95243 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC23.05■■□□□ 1.28
MBD4O95243 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC23.05■■□□□ 1.28
MBD4O95243 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC23.05■■□□□ 1.28
MBD4O95243 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC23.05■■□□□ 1.28
MBD4O95243 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC23.05■■□□□ 1.28
MBD4O95243 AC097493.4-201ENST00000641197 219 ntBASIC23.05■■□□□ 1.28
MBD4O95243 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC23.05■■□□□ 1.28
MBD4O95243 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
MBD4O95243 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC23.05■■□□□ 1.28
MBD4O95243 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC23.05■■□□□ 1.28
MBD4O95243 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC23.05■■□□□ 1.28
MBD4O95243 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC23.05■■□□□ 1.28
MBD4O95243 Z82202.1-201ENST00000623446 1880 ntBASIC23.05■■□□□ 1.28
MBD4O95243 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC23.05■■□□□ 1.28
MBD4O95243 POLI-202ENST00000406285 2030 ntTSL 2 BASIC23.04■■□□□ 1.28
MBD4O95243 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC23.04■■□□□ 1.28
MBD4O95243 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC23.04■■□□□ 1.28
MBD4O95243 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC23.04■■□□□ 1.28
MBD4O95243 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
MBD4O95243 ADM-207ENST00000530439 1839 ntTSL 2 BASIC23.04■■□□□ 1.28
MBD4O95243 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC23.04■■□□□ 1.28
MBD4O95243 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC23.04■■□□□ 1.28
MBD4O95243 TP73-202ENST00000354437 2140 ntTSL 5 BASIC23.04■■□□□ 1.28
MBD4O95243 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC23.04■■□□□ 1.28
MBD4O95243 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms