Protein–RNA interactions for Protein: O95219

SNX4, Sorting nexin-4, humanhuman

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4O95219 AC124016.1-201ENST00000609552 612 ntBASIC18.12■□□□□ 0.49
SNX4O95219 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC18.12■□□□□ 0.49
SNX4O95219 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SNX4O95219 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SNX4O95219 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC18.12■□□□□ 0.49
SNX4O95219 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC18.12■□□□□ 0.49
SNX4O95219 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SNX4O95219 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SNX4O95219 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SNX4O95219 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC18.12■□□□□ 0.49
SNX4O95219 CD37-204ENST00000535669 1674 ntTSL 2 BASIC18.12■□□□□ 0.49
SNX4O95219 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
SNX4O95219 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SNX4O95219 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC18.11■□□□□ 0.49
SNX4O95219 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
SNX4O95219 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
SNX4O95219 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SNX4O95219 NEFHP1-201ENST00000412845 2629 ntBASIC18.11■□□□□ 0.49
SNX4O95219 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SNX4O95219 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SNX4O95219 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SNX4O95219 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SNX4O95219 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
SNX4O95219 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC18.11■□□□□ 0.49
SNX4O95219 PNN-205ENST00000556530 601 ntTSL 2 BASIC18.11■□□□□ 0.49
SNX4O95219 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC18.11■□□□□ 0.49
SNX4O95219 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
SNX4O95219 AC110285.5-201ENST00000611501 352 ntBASIC18.11■□□□□ 0.49
SNX4O95219 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC18.11■□□□□ 0.49
SNX4O95219 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC18.11■□□□□ 0.49
SNX4O95219 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SNX4O95219 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SNX4O95219 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SNX4O95219 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SNX4O95219 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SNX4O95219 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SNX4O95219 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SNX4O95219 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
SNX4O95219 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
SNX4O95219 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC18.1■□□□□ 0.49
SNX4O95219 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SNX4O95219 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
SNX4O95219 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SNX4O95219 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
SNX4O95219 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
SNX4O95219 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
SNX4O95219 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SNX4O95219 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SNX4O95219 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SNX4O95219 KRASP1-201ENST00000407852 552 ntBASIC18.1■□□□□ 0.49
SNX4O95219 SERF2-207ENST00000409614 582 ntTSL 2 BASIC18.1■□□□□ 0.49
SNX4O95219 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC18.1■□□□□ 0.49
SNX4O95219 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC18.1■□□□□ 0.49
SNX4O95219 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC18.1■□□□□ 0.49
SNX4O95219 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC18.1■□□□□ 0.49
SNX4O95219 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC18.1■□□□□ 0.49
SNX4O95219 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC18.1■□□□□ 0.49
SNX4O95219 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC18.1■□□□□ 0.49
SNX4O95219 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC18.1■□□□□ 0.49
SNX4O95219 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SNX4O95219 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
SNX4O95219 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC18.1■□□□□ 0.49
SNX4O95219 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SNX4O95219 AC005332.7-201ENST00000614046 2005 ntBASIC18.1■□□□□ 0.49
SNX4O95219 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SNX4O95219 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC18.1■□□□□ 0.49
SNX4O95219 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC18.09■□□□□ 0.49
SNX4O95219 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
SNX4O95219 STK25-204ENST00000405585 1643 ntTSL 2 BASIC18.09■□□□□ 0.49
SNX4O95219 BX119927.1-201ENST00000636596 1552 ntBASIC18.09■□□□□ 0.49
SNX4O95219 AC125437.2-201ENST00000625180 2167 ntBASIC18.09■□□□□ 0.49
SNX4O95219 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SNX4O95219 PEX7-202ENST00000367756 680 ntTSL 3 BASIC18.09■□□□□ 0.49
SNX4O95219 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
SNX4O95219 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SNX4O95219 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
SNX4O95219 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC18.09■□□□□ 0.49
SNX4O95219 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC18.09■□□□□ 0.49
SNX4O95219 AC066615.1-201ENST00000640911 628 ntBASIC18.09■□□□□ 0.49
SNX4O95219 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
SNX4O95219 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SNX4O95219 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC18.09■□□□□ 0.49
SNX4O95219 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SNX4O95219 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SNX4O95219 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SNX4O95219 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
SNX4O95219 PHGDH-210ENST00000641115 1638 ntBASIC18.09■□□□□ 0.49
SNX4O95219 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
SNX4O95219 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
SNX4O95219 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC18.08■□□□□ 0.49
SNX4O95219 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC18.08■□□□□ 0.49
SNX4O95219 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
SNX4O95219 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
SNX4O95219 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC18.08■□□□□ 0.48
SNX4O95219 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
SNX4O95219 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
SNX4O95219 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
SNX4O95219 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
SNX4O95219 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC18.08■□□□□ 0.48
SNX4O95219 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC18.08■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms