Protein–RNA interactions for Protein: O95197

RTN3, Reticulon-3, humanhuman

Predicted RBP Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3O95197 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC20.35■□□□□ 0.85
RTN3O95197 AC130371.2-201ENST00000619443 611 ntBASIC20.35■□□□□ 0.85
RTN3O95197 AC133561.5-201ENST00000635547 218 ntBASIC20.35■□□□□ 0.85
RTN3O95197 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
RTN3O95197 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
RTN3O95197 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC20.35■□□□□ 0.85
RTN3O95197 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
RTN3O95197 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC20.35■□□□□ 0.85
RTN3O95197 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC20.35■□□□□ 0.85
RTN3O95197 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RTN3O95197 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RTN3O95197 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RTN3O95197 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
RTN3O95197 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC20.34■□□□□ 0.85
RTN3O95197 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC20.34■□□□□ 0.85
RTN3O95197 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RTN3O95197 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
RTN3O95197 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RTN3O95197 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RTN3O95197 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
RTN3O95197 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RTN3O95197 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RTN3O95197 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
RTN3O95197 ECEL1P3-201ENST00000427961 737 ntBASIC20.34■□□□□ 0.85
RTN3O95197 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC20.34■□□□□ 0.85
RTN3O95197 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC20.34■□□□□ 0.85
RTN3O95197 GLRB-205ENST00000512619 728 ntTSL 3 BASIC20.34■□□□□ 0.85
RTN3O95197 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC20.34■□□□□ 0.85
RTN3O95197 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC20.34■□□□□ 0.85
RTN3O95197 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC20.34■□□□□ 0.85
RTN3O95197 AC011298.2-201ENST00000617989 482 ntBASIC20.34■□□□□ 0.85
RTN3O95197 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RTN3O95197 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RTN3O95197 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
RTN3O95197 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
RTN3O95197 LBX2-AS1-202ENST00000603175 2083 ntBASIC20.34■□□□□ 0.85
RTN3O95197 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC20.34■□□□□ 0.85
RTN3O95197 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RTN3O95197 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC20.34■□□□□ 0.85
RTN3O95197 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
RTN3O95197 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
RTN3O95197 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC20.34■□□□□ 0.85
RTN3O95197 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
RTN3O95197 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
RTN3O95197 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC20.34■□□□□ 0.85
RTN3O95197 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC20.34■□□□□ 0.85
RTN3O95197 AC087289.5-201ENST00000586076 3175 ntBASIC20.34■□□□□ 0.85
RTN3O95197 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC20.34■□□□□ 0.85
RTN3O95197 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
RTN3O95197 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
RTN3O95197 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
RTN3O95197 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
RTN3O95197 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
RTN3O95197 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.85
RTN3O95197 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
RTN3O95197 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
RTN3O95197 Z85996.1-201ENST00000494644 937 ntBASIC20.33■□□□□ 0.85
RTN3O95197 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
RTN3O95197 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC20.33■□□□□ 0.85
RTN3O95197 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
RTN3O95197 ANKRD18DP-204ENST00000455355 1975 ntBASIC20.33■□□□□ 0.84
RTN3O95197 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC20.33■□□□□ 0.84
RTN3O95197 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
RTN3O95197 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
RTN3O95197 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
RTN3O95197 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RTN3O95197 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
RTN3O95197 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
RTN3O95197 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RTN3O95197 AP005242.2-201ENST00000580065 1175 ntBASIC20.32■□□□□ 0.84
RTN3O95197 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC20.32■□□□□ 0.84
RTN3O95197 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC20.32■□□□□ 0.84
RTN3O95197 AP000692.2-201ENST00000608391 879 ntBASIC20.32■□□□□ 0.84
RTN3O95197 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RTN3O95197 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC20.32■□□□□ 0.84
RTN3O95197 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
RTN3O95197 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC20.32■□□□□ 0.84
RTN3O95197 AC112907.3-201ENST00000577781 2400 ntBASIC20.32■□□□□ 0.84
RTN3O95197 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
RTN3O95197 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
RTN3O95197 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
RTN3O95197 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
RTN3O95197 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
RTN3O95197 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RTN3O95197 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RTN3O95197 DERL1-203ENST00000419562 918 ntTSL 2 BASIC20.31■□□□□ 0.84
RTN3O95197 AC097488.1-201ENST00000507834 756 ntBASIC20.31■□□□□ 0.84
RTN3O95197 AC097493.4-201ENST00000641197 219 ntBASIC20.31■□□□□ 0.84
RTN3O95197 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC20.31■□□□□ 0.84
RTN3O95197 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RTN3O95197 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RTN3O95197 AL158211.5-201ENST00000623583 2518 ntBASIC20.3■□□□□ 0.84
RTN3O95197 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC20.3■□□□□ 0.84
RTN3O95197 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC20.3■□□□□ 0.84
RTN3O95197 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC20.3■□□□□ 0.84
RTN3O95197 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC20.3■□□□□ 0.84
RTN3O95197 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
RTN3O95197 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RTN3O95197 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC20.3■□□□□ 0.84
RTN3O95197 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms