Protein–RNA interactions for Protein: O95170

CDRT1, CMT1A duplicated region transcript 1 protein, humanhuman

Predictions only

Length 752 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1O95170 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
CDRT1O95170 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CDRT1O95170 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
CDRT1O95170 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CDRT1O95170 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
CDRT1O95170 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
CDRT1O95170 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
CDRT1O95170 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC17.21■□□□□ 0.35
CDRT1O95170 ZNRF2P3-201ENST00000424200 374 ntBASIC17.21■□□□□ 0.35
CDRT1O95170 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC17.21■□□□□ 0.35
CDRT1O95170 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC17.21■□□□□ 0.35
CDRT1O95170 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CDRT1O95170 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CDRT1O95170 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC17.21■□□□□ 0.35
CDRT1O95170 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC17.21■□□□□ 0.35
CDRT1O95170 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC17.21■□□□□ 0.35
CDRT1O95170 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CDRT1O95170 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
CDRT1O95170 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CDRT1O95170 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CDRT1O95170 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC17.21■□□□□ 0.35
CDRT1O95170 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CDRT1O95170 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.34
CDRT1O95170 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.34
CDRT1O95170 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
CDRT1O95170 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC17.2■□□□□ 0.34
CDRT1O95170 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC17.2■□□□□ 0.34
CDRT1O95170 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CDRT1O95170 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CDRT1O95170 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
CDRT1O95170 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
CDRT1O95170 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
CDRT1O95170 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CDRT1O95170 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
CDRT1O95170 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CDRT1O95170 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC17.2■□□□□ 0.34
CDRT1O95170 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC17.2■□□□□ 0.34
CDRT1O95170 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC17.2■□□□□ 0.34
CDRT1O95170 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
CDRT1O95170 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
CDRT1O95170 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CDRT1O95170 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CDRT1O95170 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC17.2■□□□□ 0.34
CDRT1O95170 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CDRT1O95170 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
CDRT1O95170 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CDRT1O95170 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
CDRT1O95170 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
CDRT1O95170 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CDRT1O95170 EFTUD1P1-204ENST00000560401 1798 ntBASIC17.2■□□□□ 0.34
CDRT1O95170 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CDRT1O95170 TEX21P-204ENST00000641479 1693 ntBASIC17.2■□□□□ 0.34
CDRT1O95170 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CDRT1O95170 AC141586.3-201ENST00000562166 1838 ntBASIC17.19■□□□□ 0.34
CDRT1O95170 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
CDRT1O95170 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
CDRT1O95170 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
CDRT1O95170 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CDRT1O95170 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CDRT1O95170 VMO1-204ENST00000441199 741 ntTSL 2 BASIC17.19■□□□□ 0.34
CDRT1O95170 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC17.19■□□□□ 0.34
CDRT1O95170 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CDRT1O95170 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CDRT1O95170 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC17.19■□□□□ 0.34
CDRT1O95170 Z98044.1-201ENST00000632503 1764 ntBASIC17.19■□□□□ 0.34
CDRT1O95170 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC17.19■□□□□ 0.34
CDRT1O95170 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
CDRT1O95170 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CDRT1O95170 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CDRT1O95170 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CDRT1O95170 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CDRT1O95170 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
CDRT1O95170 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
CDRT1O95170 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CDRT1O95170 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CDRT1O95170 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CDRT1O95170 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
CDRT1O95170 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC17.18■□□□□ 0.34
CDRT1O95170 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC17.18■□□□□ 0.34
CDRT1O95170 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CDRT1O95170 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CDRT1O95170 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CDRT1O95170 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CDRT1O95170 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CDRT1O95170 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
CDRT1O95170 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
CDRT1O95170 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CDRT1O95170 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CDRT1O95170 PARP1-202ENST00000366792 553 ntTSL 3 BASIC17.18■□□□□ 0.34
CDRT1O95170 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CDRT1O95170 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC17.18■□□□□ 0.34
CDRT1O95170 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC17.18■□□□□ 0.34
CDRT1O95170 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CDRT1O95170 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CDRT1O95170 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC17.18■□□□□ 0.34
CDRT1O95170 MYCNOS-205ENST00000641950 531 ntBASIC17.18■□□□□ 0.34
CDRT1O95170 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC17.18■□□□□ 0.34
CDRT1O95170 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CDRT1O95170 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
CDRT1O95170 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms