Protein–RNA interactions for Protein: O60832

DKC1, H/ACA ribonucleoprotein complex subunit 4, humanhuman

Known RBP eCLIP

Length 514 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DKC1O60832 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.57e-7■□□□□ 8.6
DKC1O60832 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC18.07■□□□□ 0.487e-7■□□□□ 8.6
DKC1O60832 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.459e-19■□□□□ 8.6
DKC1O60832 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.267e-7■□□□□ 8.6
DKC1O60832 MIR4435-2HG-204ENST00000419736 777 ntTSL 3 BASIC15.9■□□□□ 0.144e-8■□□□□ 8.6
DKC1O60832 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.139e-19■□□□□ 8.6
DKC1O60832 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC15.64■□□□□ 0.097e-7■□□□□ 8.6
DKC1O60832 DOCK4-212ENST00000476846 3218 ntTSL 515.33■□□□□ 0.047e-7■□□□□ 8.6
DKC1O60832 DOCK4-206ENST00000437633 6212 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.027e-7■□□□□ 8.6
DKC1O60832 PCK2-207ENST00000559171 508 ntTSL 315.17■□□□□ 0.027e-7■□□□□ 8.6
DKC1O60832 PCK2-208ENST00000559250 1804 ntTSL 5 BASIC15.15■□□□□ 0.027e-7■□□□□ 8.6
DKC1O60832 PCK2-216ENST00000561286 2012 ntTSL 2 BASIC15.02□□□□□ -0.017e-7■□□□□ 8.6
DKC1O60832 DOCK4-204ENST00000428084 7997 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.357e-7■□□□□ 8.6
DKC1O60832 MIR4435-2HG-201ENST00000308604 552 ntTSL 1 (best) BASIC12.75□□□□□ -0.374e-8■□□□□ 8.6
DKC1O60832 EEF1A1-201ENST00000309268 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.417e-7■□□□□ 8.6
DKC1O60832 AL512328.1-201ENST00000412344 536 ntTSL 3 BASIC11.92□□□□□ -0.58e-13■□□□□ 8.6
DKC1O60832 ACSL3-210ENST00000540115 624 ntTSL 311.28□□□□□ -0.69e-19■□□□□ 8.6
DKC1O60832 MIR4435-2HG-210ENST00000442293 546 ntTSL 510.44□□□□□ -0.744e-8■□□□□ 8.6
DKC1O60832 MIR4435-2HG-217ENST00000604981 759 ntTSL 1 (best) BASIC9.62□□□□□ -0.874e-8■□□□□ 8.6
DKC1O60832 MIR4435-2HG-208ENST00000439494 707 ntTSL 5 BASIC9.61□□□□□ -0.874e-8■□□□□ 8.6
DKC1O60832 EEF1A1-207ENST00000490569 1802 ntTSL 59.09□□□□□ -0.957e-7■□□□□ 8.6
DKC1O60832 TIMM9-205ENST00000555404 430 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.044e-8■□□□□ 8.6
DKC1O60832 PRKCA-201ENST00000284384 2718 ntTSL 58.52□□□□□ -1.047e-7■□□□□ 8.6
DKC1O60832 PRKCA-202ENST00000413366 8751 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.057e-7■□□□□ 8.6
DKC1O60832 ACSL3-211ENST00000542810 428 ntTSL 28.36□□□□□ -1.079e-19■□□□□ 8.6
DKC1O60832 MIR4435-2HG-203ENST00000409569 514 ntTSL 1 (best) BASIC7.59□□□□□ -1.194e-8■□□□□ 8.6
DKC1O60832 EEF1A1-209ENST00000495333 958 ntTSL 57.33□□□□□ -1.247e-7■□□□□ 8.6
DKC1O60832 MIR4435-2HG-209ENST00000441075 704 ntTSL 5 BASIC6.99□□□□□ -1.294e-8■□□□□ 8.6
DKC1O60832 ZFYVE16-206ENST00000510158 6680 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.364e-8■□□□□ 8.6
DKC1O60832 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC6.22□□□□□ -1.417e-7■□□□□ 8.6
DKC1O60832 TIMM9-204ENST00000555097 377 ntTSL 55.96□□□□□ -1.464e-8■□□□□ 8.6
DKC1O60832 ZFYVE16-211ENST00000512558 4496 ntTSL 25.84□□□□□ -1.474e-8■□□□□ 8.6
DKC1O60832 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC5.76□□□□□ -1.497e-7■□□□□ 8.6
DKC1O60832 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.497e-7■□□□□ 8.6
DKC1O60832 EEF1A1-208ENST00000491404 633 ntTSL 35.47□□□□□ -1.537e-7■□□□□ 8.6
DKC1O60832 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC4.93□□□□□ -1.627e-7■□□□□ 8.6
DKC1O60832 TIMM9-201ENST00000216463 1075 ntTSL 34.8□□□□□ -1.644e-8■□□□□ 8.6
DKC1O60832 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.74e-8■□□□□ 8.6
DKC1O60832 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC4.44□□□□□ -1.74e-8■□□□□ 8.6
DKC1O60832 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.734e-8■□□□□ 8.6
DKC1O60832 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.84e-8■□□□□ 8.6
DKC1O60832 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC3.71□□□□□ -1.824e-8■□□□□ 8.6
DKC1O60832 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC3.57□□□□□ -1.844e-8■□□□□ 8.6
DKC1O60832 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.844e-8■□□□□ 8.6
DKC1O60832 TIMM9-210ENST00000557397 571 ntTSL 42.57□□□□□ -24e-8■□□□□ 8.6
DKC1O60832 CTSD-205ENST00000438213 946 ntTSL 218.43■□□□□ 0.542e-14■□□□□ 8.6
DKC1O60832 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.194e-13■□□□□ 8.6
DKC1O60832 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC21.82■■□□□ 1.083e-6■□□□□ 8.5
DKC1O60832 GSN-202ENST00000373807 2823 ntTSL 218.58■□□□□ 0.563e-6■□□□□ 8.5
DKC1O60832 GSN-206ENST00000394353 2311 ntTSL 2 BASIC17.01■□□□□ 0.313e-6■□□□□ 8.5
DKC1O60832 GSN-215ENST00000545652 2428 ntTSL 2 BASIC16.57■□□□□ 0.243e-6■□□□□ 8.5
DKC1O60832 GSN-209ENST00000449733 2702 ntTSL 2 BASIC16.1■□□□□ 0.173e-6■□□□□ 8.5
DKC1O60832 GSN-203ENST00000373808 2664 ntTSL 2 BASIC16.03■□□□□ 0.163e-6■□□□□ 8.5
DKC1O60832 GSN-205ENST00000373823 3341 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.313e-6■□□□□ 8.5
DKC1O60832 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.454e-12■□□□□ 8.5
DKC1O60832 PGC-204ENST00000425343 1152 ntTSL 2 BASIC14.1□□□□□ -0.154e-12■□□□□ 8.5
DKC1O60832 PGC-201ENST00000356667 480 ntTSL 511.39□□□□□ -0.594e-12■□□□□ 8.5
DKC1O60832 RNU12-201ENST00000362512 150 ntBASIC13.38□□□□□ -0.271e-323■□□□□ 8.5
DKC1O60832 Z93241.1-201ENST00000602478 664 ntBASIC12.11□□□□□ -0.471e-323■□□□□ 8.5
DKC1O60832 A2M-213ENST00000546069 593 ntTSL 57.47□□□□□ -1.212e-31■□□□□ 8.4
DKC1O60832 HSF1-206ENST00000528988 775 ntTSL 328.67■■■□□ 2.186e-10■□□□□ 8.4
DKC1O60832 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.716e-10■□□□□ 8.4
DKC1O60832 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC24.59■■□□□ 1.536e-10■□□□□ 8.4
DKC1O60832 GSN-201ENST00000373806 879 ntTSL 221.2■□□□□ 0.985e-6■□□□□ 8.4
DKC1O60832 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.95e-6■□□□□ 8.4
DKC1O60832 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.865e-6■□□□□ 8.4
DKC1O60832 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.835e-6■□□□□ 8.4
DKC1O60832 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.785e-6■□□□□ 8.4
DKC1O60832 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.655e-6■□□□□ 8.4
DKC1O60832 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC18.15■□□□□ 0.55e-6■□□□□ 8.4
DKC1O60832 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC15.35■□□□□ 0.055e-6■□□□□ 8.4
DKC1O60832 HSF1-212ENST00000533240 561 ntTSL 514.91□□□□□ -0.026e-10■□□□□ 8.4
DKC1O60832 DAG1-218ENST00000515359 5576 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.155e-6■□□□□ 8.4
DKC1O60832 HSF1-210ENST00000532338 3451 ntTSL 213.92□□□□□ -0.186e-10■□□□□ 8.4
DKC1O60832 ASPH-208ENST00000517856 6337 ntTSL 2 BASIC13.92□□□□□ -0.185e-6■□□□□ 8.4
DKC1O60832 ASPH-203ENST00000379454 5268 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.255e-6■□□□□ 8.4
DKC1O60832 ASPH-205ENST00000445642 3717 ntTSL 2 BASIC13.41□□□□□ -0.265e-6■□□□□ 8.4
DKC1O60832 ASPH-201ENST00000356457 3730 ntTSL 1 (best) BASIC12.34□□□□□ -0.435e-6■□□□□ 8.4
DKC1O60832 ASPH-225ENST00000522835 1258 ntTSL 2 BASIC10.39□□□□□ -0.755e-6■□□□□ 8.4
DKC1O60832 SCD-201ENST00000370355 5362 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.86e-16■□□□□ 8.4
DKC1O60832 ASPH-207ENST00000517847 1947 ntTSL 5 BASIC9.39□□□□□ -0.915e-6■□□□□ 8.4
DKC1O60832 ASPH-230ENST00000541428 2550 ntAPPRIS ALT2 TSL 2 BASIC9.15□□□□□ -0.955e-6■□□□□ 8.4
DKC1O60832 ASPH-209ENST00000517903 2658 ntTSL 1 (best) BASIC8.56□□□□□ -1.045e-6■□□□□ 8.4
DKC1O60832 ASPH-212ENST00000518306 755 ntTSL 58.29□□□□□ -1.085e-6■□□□□ 8.4
DKC1O60832 ASPH-223ENST00000522349 531 ntTSL 55.19□□□□□ -1.585e-6■□□□□ 8.4
DKC1O60832 ASPH-228ENST00000523927 556 ntTSL 44□□□□□ -1.775e-6■□□□□ 8.4
DKC1O60832 ASPH-210ENST00000517928 548 ntTSL 42.8□□□□□ -1.965e-6■□□□□ 8.4
DKC1O60832 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC23.92■■□□□ 1.421e-16■□□□□ 8.3
DKC1O60832 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.391e-16■□□□□ 8.3
DKC1O60832 AKT2-218ENST00000483166 4454 ntTSL 214.17□□□□□ -0.141e-16■□□□□ 8.3
DKC1O60832 AKT2-216ENST00000476266 3309 ntTSL 513.04□□□□□ -0.321e-16■□□□□ 8.3
DKC1O60832 SNORD13-201ENST00000459299 104 ntBASIC1.82□□□□□ -2.121e-323■□□□□ 8.2
DKC1O60832 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC24.03■■□□□ 1.441e-7■□□□□ 8.2
DKC1O60832 ZNF562-203ENST00000585350 577 ntTSL 517.03■□□□□ 0.321e-7■□□□□ 8.2
DKC1O60832 RPS6-201ENST00000315377 863 ntTSL 3 BASIC13.58□□□□□ -0.241e-7■□□□□ 8.2
DKC1O60832 RPS6-202ENST00000380381 892 ntTSL 2 BASIC10.51□□□□□ -0.731e-7■□□□□ 8.2
DKC1O60832 RPS6-204ENST00000380394 1387 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.821e-7■□□□□ 8.2
DKC1O60832 ZNF562-208ENST00000590155 1712 ntAPPRIS ALT2 TSL 2 BASIC9.51□□□□□ -0.891e-7■□□□□ 8.2
DKC1O60832 ZNF562-207ENST00000589542 491 ntTSL 38.44□□□□□ -1.061e-7■□□□□ 8.2
DKC1O60832 ZNF562-206ENST00000588653 585 ntTSL 27.65□□□□□ -1.181e-7■□□□□ 8.2
Retrieved 100 of 8,567 protein–RNA pairs in 33.7 ms