Protein–RNA interactions for Protein: O60811

PRAMEF2, PRAME family member 2, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF2O60811 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC18.14■□□□□ 0.5
PRAMEF2O60811 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
PRAMEF2O60811 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.5
PRAMEF2O60811 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.5
PRAMEF2O60811 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC18.14■□□□□ 0.5
PRAMEF2O60811 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PRAMEF2O60811 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC18.14■□□□□ 0.49
PRAMEF2O60811 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
PRAMEF2O60811 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC18.14■□□□□ 0.49
PRAMEF2O60811 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC18.14■□□□□ 0.49
PRAMEF2O60811 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC18.14■□□□□ 0.49
PRAMEF2O60811 AL353708.3-201ENST00000610272 989 ntBASIC18.14■□□□□ 0.49
PRAMEF2O60811 DECR2-212ENST00000627716 352 ntTSL 2 BASIC18.14■□□□□ 0.49
PRAMEF2O60811 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PRAMEF2O60811 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PRAMEF2O60811 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC18.14■□□□□ 0.49
PRAMEF2O60811 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
PRAMEF2O60811 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC18.14■□□□□ 0.49
PRAMEF2O60811 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
PRAMEF2O60811 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PRAMEF2O60811 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PRAMEF2O60811 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC18.13■□□□□ 0.49
PRAMEF2O60811 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
PRAMEF2O60811 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PRAMEF2O60811 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PRAMEF2O60811 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PRAMEF2O60811 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
PRAMEF2O60811 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC18.13■□□□□ 0.49
PRAMEF2O60811 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC18.13■□□□□ 0.49
PRAMEF2O60811 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
PRAMEF2O60811 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC18.13■□□□□ 0.49
PRAMEF2O60811 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC18.13■□□□□ 0.49
PRAMEF2O60811 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC18.13■□□□□ 0.49
PRAMEF2O60811 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
PRAMEF2O60811 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
PRAMEF2O60811 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
PRAMEF2O60811 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PRAMEF2O60811 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PRAMEF2O60811 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PRAMEF2O60811 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC18.13■□□□□ 0.49
PRAMEF2O60811 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
PRAMEF2O60811 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PRAMEF2O60811 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC18.12■□□□□ 0.49
PRAMEF2O60811 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
PRAMEF2O60811 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PRAMEF2O60811 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PRAMEF2O60811 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
PRAMEF2O60811 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
PRAMEF2O60811 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PRAMEF2O60811 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PRAMEF2O60811 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC18.12■□□□□ 0.49
PRAMEF2O60811 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
PRAMEF2O60811 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PRAMEF2O60811 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
PRAMEF2O60811 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
PRAMEF2O60811 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC18.12■□□□□ 0.49
PRAMEF2O60811 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC18.12■□□□□ 0.49
PRAMEF2O60811 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PRAMEF2O60811 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
PRAMEF2O60811 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PRAMEF2O60811 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC18.12■□□□□ 0.49
PRAMEF2O60811 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PRAMEF2O60811 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
PRAMEF2O60811 POLI-202ENST00000406285 2030 ntTSL 2 BASIC18.11■□□□□ 0.49
PRAMEF2O60811 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PRAMEF2O60811 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PRAMEF2O60811 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC18.11■□□□□ 0.49
PRAMEF2O60811 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
PRAMEF2O60811 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
PRAMEF2O60811 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
PRAMEF2O60811 C1QL1P1-201ENST00000568105 661 ntBASIC18.11■□□□□ 0.49
PRAMEF2O60811 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
PRAMEF2O60811 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PRAMEF2O60811 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC18.11■□□□□ 0.49
PRAMEF2O60811 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC18.11■□□□□ 0.49
PRAMEF2O60811 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PRAMEF2O60811 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC18.11■□□□□ 0.49
PRAMEF2O60811 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
PRAMEF2O60811 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
PRAMEF2O60811 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC18.11■□□□□ 0.49
PRAMEF2O60811 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PRAMEF2O60811 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
PRAMEF2O60811 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
PRAMEF2O60811 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
PRAMEF2O60811 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
PRAMEF2O60811 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
PRAMEF2O60811 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
PRAMEF2O60811 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
PRAMEF2O60811 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PRAMEF2O60811 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
PRAMEF2O60811 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PRAMEF2O60811 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC18.1■□□□□ 0.49
PRAMEF2O60811 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PRAMEF2O60811 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC18.1■□□□□ 0.49
PRAMEF2O60811 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC18.1■□□□□ 0.49
PRAMEF2O60811 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC18.1■□□□□ 0.49
PRAMEF2O60811 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC18.1■□□□□ 0.49
PRAMEF2O60811 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PRAMEF2O60811 NUDT16P1-203ENST00000513809 620 ntBASIC18.1■□□□□ 0.49
PRAMEF2O60811 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms