Protein–RNA interactions for Protein: O60759

CYTIP, Cytohesin-interacting protein, humanhuman

Predictions only

Length 359 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYTIPO60759 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CYTIPO60759 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CYTIPO60759 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
CYTIPO60759 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC17.24■□□□□ 0.35
CYTIPO60759 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CYTIPO60759 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
CYTIPO60759 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC17.24■□□□□ 0.35
CYTIPO60759 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CYTIPO60759 AL355355.2-201ENST00000442321 338 ntBASIC17.24■□□□□ 0.35
CYTIPO60759 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CYTIPO60759 DHDH-203ENST00000522614 776 ntTSL 5 BASIC17.24■□□□□ 0.35
CYTIPO60759 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
CYTIPO60759 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC17.24■□□□□ 0.35
CYTIPO60759 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC17.24■□□□□ 0.35
CYTIPO60759 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC17.24■□□□□ 0.35
CYTIPO60759 AC026471.5-201ENST00000615068 467 ntBASIC17.24■□□□□ 0.35
CYTIPO60759 ABBA01031674.1-201ENST00000635145 728 ntBASIC17.24■□□□□ 0.35
CYTIPO60759 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CYTIPO60759 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
CYTIPO60759 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CYTIPO60759 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CYTIPO60759 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC17.24■□□□□ 0.35
CYTIPO60759 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC17.24■□□□□ 0.35
CYTIPO60759 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CYTIPO60759 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC17.24■□□□□ 0.35
CYTIPO60759 KRT17P2-201ENST00000300992 1314 ntBASIC17.23■□□□□ 0.35
CYTIPO60759 MCC-208ENST00000514701 2855 ntTSL 2 BASIC17.23■□□□□ 0.35
CYTIPO60759 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CYTIPO60759 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CYTIPO60759 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
CYTIPO60759 AC104417.2-201ENST00000562989 1793 ntBASIC17.23■□□□□ 0.35
CYTIPO60759 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CYTIPO60759 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC17.23■□□□□ 0.35
CYTIPO60759 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CYTIPO60759 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CYTIPO60759 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC17.23■□□□□ 0.35
CYTIPO60759 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CYTIPO60759 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CYTIPO60759 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CYTIPO60759 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC17.23■□□□□ 0.35
CYTIPO60759 PTPA-216ENST00000432651 857 ntTSL 2 BASIC17.23■□□□□ 0.35
CYTIPO60759 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC17.23■□□□□ 0.35
CYTIPO60759 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC17.23■□□□□ 0.35
CYTIPO60759 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC17.23■□□□□ 0.35
CYTIPO60759 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC17.23■□□□□ 0.35
CYTIPO60759 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC17.23■□□□□ 0.35
CYTIPO60759 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC17.23■□□□□ 0.35
CYTIPO60759 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CYTIPO60759 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC17.23■□□□□ 0.35
CYTIPO60759 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CYTIPO60759 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
CYTIPO60759 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CYTIPO60759 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
CYTIPO60759 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CYTIPO60759 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CYTIPO60759 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CYTIPO60759 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
CYTIPO60759 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CYTIPO60759 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CYTIPO60759 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC17.22■□□□□ 0.35
CYTIPO60759 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
CYTIPO60759 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
CYTIPO60759 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CYTIPO60759 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC17.22■□□□□ 0.35
CYTIPO60759 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC17.22■□□□□ 0.35
CYTIPO60759 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CYTIPO60759 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CYTIPO60759 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CYTIPO60759 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CYTIPO60759 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC17.22■□□□□ 0.35
CYTIPO60759 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CYTIPO60759 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC17.22■□□□□ 0.35
CYTIPO60759 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC17.22■□□□□ 0.35
CYTIPO60759 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CYTIPO60759 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CYTIPO60759 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC17.22■□□□□ 0.35
CYTIPO60759 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CYTIPO60759 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CYTIPO60759 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CYTIPO60759 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CYTIPO60759 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC17.22■□□□□ 0.35
CYTIPO60759 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC17.21■□□□□ 0.35
CYTIPO60759 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CYTIPO60759 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC17.21■□□□□ 0.35
CYTIPO60759 LINC01465-201ENST00000408887 1940 ntBASIC17.21■□□□□ 0.35
CYTIPO60759 AL158211.5-201ENST00000623583 2518 ntBASIC17.21■□□□□ 0.35
CYTIPO60759 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
CYTIPO60759 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC17.21■□□□□ 0.35
CYTIPO60759 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC17.21■□□□□ 0.35
CYTIPO60759 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC17.21■□□□□ 0.35
CYTIPO60759 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CYTIPO60759 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC17.21■□□□□ 0.35
CYTIPO60759 Z85996.1-201ENST00000494644 937 ntBASIC17.21■□□□□ 0.35
CYTIPO60759 AC116562.2-201ENST00000507042 360 ntBASIC17.21■□□□□ 0.35
CYTIPO60759 GLRB-205ENST00000512619 728 ntTSL 3 BASIC17.21■□□□□ 0.35
CYTIPO60759 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC17.21■□□□□ 0.35
CYTIPO60759 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC17.21■□□□□ 0.35
CYTIPO60759 DECR2-212ENST00000627716 352 ntTSL 2 BASIC17.21■□□□□ 0.35
CYTIPO60759 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
CYTIPO60759 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms