Protein–RNA interactions for Protein: O60493

SNX3, Sorting nexin-3, humanhuman

Predictions only

Length 162 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3O60493 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SNX3O60493 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC19.03■□□□□ 0.64
SNX3O60493 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
SNX3O60493 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC19.03■□□□□ 0.64
SNX3O60493 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SNX3O60493 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC19.03■□□□□ 0.64
SNX3O60493 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC19.03■□□□□ 0.64
SNX3O60493 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC19.03■□□□□ 0.64
SNX3O60493 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
SNX3O60493 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SNX3O60493 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SNX3O60493 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC19.03■□□□□ 0.64
SNX3O60493 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SNX3O60493 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC19.03■□□□□ 0.64
SNX3O60493 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC19.03■□□□□ 0.64
SNX3O60493 MAG-206ENST00000597035 542 ntTSL 4 BASIC19.03■□□□□ 0.64
SNX3O60493 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC19.03■□□□□ 0.64
SNX3O60493 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
SNX3O60493 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC19.03■□□□□ 0.64
SNX3O60493 ESPNP-201ENST00000270691 2015 ntBASIC19.03■□□□□ 0.64
SNX3O60493 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SNX3O60493 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC19.03■□□□□ 0.64
SNX3O60493 FST-202ENST00000396947 2538 ntTSL 5 BASIC19.03■□□□□ 0.64
SNX3O60493 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC19.03■□□□□ 0.64
SNX3O60493 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
SNX3O60493 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SNX3O60493 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC19.02■□□□□ 0.64
SNX3O60493 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC19.02■□□□□ 0.64
SNX3O60493 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
SNX3O60493 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
SNX3O60493 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
SNX3O60493 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SNX3O60493 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
SNX3O60493 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
SNX3O60493 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SNX3O60493 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
SNX3O60493 HLA-G-202ENST00000376815 851 ntBASIC19.02■□□□□ 0.64
SNX3O60493 HLA-G-203ENST00000376818 1127 ntBASIC19.02■□□□□ 0.64
SNX3O60493 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
SNX3O60493 AL356441.2-201ENST00000443009 864 ntBASIC19.02■□□□□ 0.64
SNX3O60493 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC19.02■□□□□ 0.64
SNX3O60493 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC19.02■□□□□ 0.64
SNX3O60493 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC19.02■□□□□ 0.64
SNX3O60493 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC19.02■□□□□ 0.64
SNX3O60493 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SNX3O60493 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
SNX3O60493 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
SNX3O60493 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC19.02■□□□□ 0.63
SNX3O60493 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.63
SNX3O60493 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
SNX3O60493 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
SNX3O60493 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
SNX3O60493 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC19.02■□□□□ 0.63
SNX3O60493 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC19.01■□□□□ 0.63
SNX3O60493 AC019069.1-201ENST00000610008 1333 ntBASIC19.01■□□□□ 0.63
SNX3O60493 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SNX3O60493 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
SNX3O60493 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
SNX3O60493 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SNX3O60493 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC19.01■□□□□ 0.63
SNX3O60493 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC19.01■□□□□ 0.63
SNX3O60493 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SNX3O60493 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC19.01■□□□□ 0.63
SNX3O60493 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC19.01■□□□□ 0.63
SNX3O60493 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC19.01■□□□□ 0.63
SNX3O60493 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC19.01■□□□□ 0.63
SNX3O60493 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
SNX3O60493 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SNX3O60493 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
SNX3O60493 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SNX3O60493 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
SNX3O60493 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SNX3O60493 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
SNX3O60493 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SNX3O60493 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SNX3O60493 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
SNX3O60493 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC19.01■□□□□ 0.63
SNX3O60493 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SNX3O60493 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC19■□□□□ 0.63
SNX3O60493 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC19■□□□□ 0.63
SNX3O60493 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC19■□□□□ 0.63
SNX3O60493 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SNX3O60493 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC19■□□□□ 0.63
SNX3O60493 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
SNX3O60493 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC19■□□□□ 0.63
SNX3O60493 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC19■□□□□ 0.63
SNX3O60493 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC19■□□□□ 0.63
SNX3O60493 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC19■□□□□ 0.63
SNX3O60493 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
SNX3O60493 EML3-212ENST00000494176 2901 ntTSL 2 BASIC19■□□□□ 0.63
SNX3O60493 EML3-216ENST00000529309 2909 ntTSL 2 BASIC19■□□□□ 0.63
SNX3O60493 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SNX3O60493 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC19■□□□□ 0.63
SNX3O60493 AL136116.3-201ENST00000402907 1138 ntBASIC19■□□□□ 0.63
SNX3O60493 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC19■□□□□ 0.63
SNX3O60493 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
SNX3O60493 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC19■□□□□ 0.63
SNX3O60493 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SNX3O60493 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC19■□□□□ 0.63
SNX3O60493 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC19■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms