Protein–RNA interactions for Protein: O43679

LDB2, LIM domain-binding protein 2, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2O43679 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
LDB2O43679 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
LDB2O43679 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
LDB2O43679 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
LDB2O43679 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
LDB2O43679 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC19.32■□□□□ 0.68
LDB2O43679 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
LDB2O43679 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
LDB2O43679 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
LDB2O43679 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
LDB2O43679 AC018445.3-201ENST00000624177 1945 ntBASIC19.31■□□□□ 0.68
LDB2O43679 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC19.31■□□□□ 0.68
LDB2O43679 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC19.31■□□□□ 0.68
LDB2O43679 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
LDB2O43679 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC19.31■□□□□ 0.68
LDB2O43679 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC19.31■□□□□ 0.68
LDB2O43679 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
LDB2O43679 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
LDB2O43679 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
LDB2O43679 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
LDB2O43679 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
LDB2O43679 AC098590.1-201ENST00000468126 897 ntBASIC19.31■□□□□ 0.68
LDB2O43679 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC19.31■□□□□ 0.68
LDB2O43679 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC19.31■□□□□ 0.68
LDB2O43679 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC19.31■□□□□ 0.68
LDB2O43679 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC19.31■□□□□ 0.68
LDB2O43679 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
LDB2O43679 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC19.31■□□□□ 0.68
LDB2O43679 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
LDB2O43679 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
LDB2O43679 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
LDB2O43679 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
LDB2O43679 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
LDB2O43679 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC19.3■□□□□ 0.68
LDB2O43679 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
LDB2O43679 BX323043.1-201ENST00000641006 1765 ntBASIC19.3■□□□□ 0.68
LDB2O43679 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC19.3■□□□□ 0.68
LDB2O43679 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC19.3■□□□□ 0.68
LDB2O43679 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
LDB2O43679 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC19.3■□□□□ 0.68
LDB2O43679 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC19.3■□□□□ 0.68
LDB2O43679 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
LDB2O43679 AC098818.2-201ENST00000564925 2320 ntBASIC19.3■□□□□ 0.68
LDB2O43679 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
LDB2O43679 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
LDB2O43679 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
LDB2O43679 AP000974.1-201ENST00000623909 2387 ntBASIC19.29■□□□□ 0.68
LDB2O43679 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
LDB2O43679 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
LDB2O43679 HTR7P1-201ENST00000538670 1336 ntBASIC19.29■□□□□ 0.68
LDB2O43679 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
LDB2O43679 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC19.29■□□□□ 0.68
LDB2O43679 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
LDB2O43679 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
LDB2O43679 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
LDB2O43679 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
LDB2O43679 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC19.29■□□□□ 0.68
LDB2O43679 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC19.29■□□□□ 0.68
LDB2O43679 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC19.29■□□□□ 0.68
LDB2O43679 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC19.29■□□□□ 0.68
LDB2O43679 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
LDB2O43679 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC19.29■□□□□ 0.68
LDB2O43679 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC19.29■□□□□ 0.68
LDB2O43679 AL353708.3-201ENST00000610272 989 ntBASIC19.29■□□□□ 0.68
LDB2O43679 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
LDB2O43679 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
LDB2O43679 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
LDB2O43679 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
LDB2O43679 AC087289.5-201ENST00000586076 3175 ntBASIC19.29■□□□□ 0.68
LDB2O43679 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
LDB2O43679 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
LDB2O43679 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
LDB2O43679 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
LDB2O43679 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
LDB2O43679 AL161938.1-201ENST00000569833 2180 ntBASIC19.28■□□□□ 0.68
LDB2O43679 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
LDB2O43679 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
LDB2O43679 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
LDB2O43679 NIFKP9-201ENST00000419265 221 ntBASIC19.28■□□□□ 0.68
LDB2O43679 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
LDB2O43679 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC19.28■□□□□ 0.68
LDB2O43679 DET1-205ENST00000558413 583 ntTSL 4 BASIC19.28■□□□□ 0.68
LDB2O43679 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC19.28■□□□□ 0.68
LDB2O43679 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
LDB2O43679 AL445675.2-201ENST00000620291 557 ntBASIC19.28■□□□□ 0.68
LDB2O43679 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC19.28■□□□□ 0.68
LDB2O43679 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
LDB2O43679 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
LDB2O43679 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
LDB2O43679 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
LDB2O43679 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
LDB2O43679 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC19.28■□□□□ 0.68
LDB2O43679 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC19.28■□□□□ 0.68
LDB2O43679 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
LDB2O43679 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
LDB2O43679 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
LDB2O43679 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
LDB2O43679 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
LDB2O43679 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC19.28■□□□□ 0.68
LDB2O43679 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC19.28■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms