Protein–RNA interactions for Protein: O15239

NDUFA1, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA1O15239 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
NDUFA1O15239 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
NDUFA1O15239 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
NDUFA1O15239 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
NDUFA1O15239 USP49-202ENST00000373010 2446 ntTSL 5 BASIC13.21□□□□□ -0.29
NDUFA1O15239 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC13.21□□□□□ -0.29
NDUFA1O15239 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
NDUFA1O15239 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
NDUFA1O15239 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
NDUFA1O15239 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
NDUFA1O15239 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC13.21□□□□□ -0.29
NDUFA1O15239 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC13.21□□□□□ -0.29
NDUFA1O15239 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
NDUFA1O15239 AC007322.4-201ENST00000509611 723 ntBASIC13.21□□□□□ -0.29
NDUFA1O15239 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC13.21□□□□□ -0.29
NDUFA1O15239 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
NDUFA1O15239 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
NDUFA1O15239 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
NDUFA1O15239 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
NDUFA1O15239 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
NDUFA1O15239 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
NDUFA1O15239 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
NDUFA1O15239 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC13.21□□□□□ -0.29
NDUFA1O15239 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
NDUFA1O15239 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
NDUFA1O15239 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.3
NDUFA1O15239 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.3
NDUFA1O15239 PCDHB18P-201ENST00000524813 2368 ntBASIC13.21□□□□□ -0.3
NDUFA1O15239 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
NDUFA1O15239 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC13.21□□□□□ -0.3
NDUFA1O15239 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC13.21□□□□□ -0.3
NDUFA1O15239 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
NDUFA1O15239 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
NDUFA1O15239 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
NDUFA1O15239 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
NDUFA1O15239 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
NDUFA1O15239 AC018470.1-201ENST00000624790 3129 ntBASIC13.2□□□□□ -0.3
NDUFA1O15239 LTB4R2-202ENST00000528054 3092 ntBASIC13.2□□□□□ -0.3
NDUFA1O15239 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC13.2□□□□□ -0.3
NDUFA1O15239 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC13.2□□□□□ -0.3
NDUFA1O15239 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
NDUFA1O15239 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC13.2□□□□□ -0.3
NDUFA1O15239 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
NDUFA1O15239 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
NDUFA1O15239 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
NDUFA1O15239 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC13.2□□□□□ -0.3
NDUFA1O15239 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
NDUFA1O15239 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
NDUFA1O15239 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
NDUFA1O15239 DBI-210ENST00000542275 757 ntTSL 5 BASIC13.2□□□□□ -0.3
NDUFA1O15239 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC13.2□□□□□ -0.3
NDUFA1O15239 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC13.2□□□□□ -0.3
NDUFA1O15239 AC137761.2-201ENST00000561729 223 ntBASIC13.2□□□□□ -0.3
NDUFA1O15239 AC145350.3-201ENST00000569033 163 ntBASIC13.2□□□□□ -0.3
NDUFA1O15239 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
NDUFA1O15239 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
NDUFA1O15239 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
NDUFA1O15239 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
NDUFA1O15239 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC13.2□□□□□ -0.3
NDUFA1O15239 PODN-203ENST00000395871 2744 ntTSL 5 BASIC13.2□□□□□ -0.3
NDUFA1O15239 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC13.2□□□□□ -0.3
NDUFA1O15239 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC13.2□□□□□ -0.3
NDUFA1O15239 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
NDUFA1O15239 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
NDUFA1O15239 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
NDUFA1O15239 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
NDUFA1O15239 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC13.2□□□□□ -0.3
NDUFA1O15239 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC13.2□□□□□ -0.3
NDUFA1O15239 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
NDUFA1O15239 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC13.19□□□□□ -0.3
NDUFA1O15239 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
NDUFA1O15239 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
NDUFA1O15239 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC13.19□□□□□ -0.3
NDUFA1O15239 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
NDUFA1O15239 WIZP1-201ENST00000531444 2299 ntBASIC13.19□□□□□ -0.3
NDUFA1O15239 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC13.19□□□□□ -0.3
NDUFA1O15239 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC13.19□□□□□ -0.3
NDUFA1O15239 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
NDUFA1O15239 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC13.19□□□□□ -0.3
NDUFA1O15239 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
NDUFA1O15239 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC13.19□□□□□ -0.3
NDUFA1O15239 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
NDUFA1O15239 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
NDUFA1O15239 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
NDUFA1O15239 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
NDUFA1O15239 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
NDUFA1O15239 AC016769.1-201ENST00000409132 1010 ntBASIC13.19□□□□□ -0.3
NDUFA1O15239 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC13.19□□□□□ -0.3
NDUFA1O15239 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC13.19□□□□□ -0.3
NDUFA1O15239 SPI1-203ENST00000533030 661 ntTSL 2 BASIC13.19□□□□□ -0.3
NDUFA1O15239 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC13.19□□□□□ -0.3
NDUFA1O15239 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
NDUFA1O15239 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
NDUFA1O15239 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
NDUFA1O15239 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
NDUFA1O15239 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
NDUFA1O15239 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
NDUFA1O15239 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC13.19□□□□□ -0.3
NDUFA1O15239 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
NDUFA1O15239 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms