Protein–RNA interactions for Protein: O00442

RTCA, RNA 3'-terminal phosphate cyclase, humanhuman

Known RBP Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCAO00442 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC18.42■□□□□ 0.54
RTCAO00442 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.42■□□□□ 0.54
RTCAO00442 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
RTCAO00442 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC18.42■□□□□ 0.54
RTCAO00442 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
RTCAO00442 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
RTCAO00442 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.42■□□□□ 0.54
RTCAO00442 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.42■□□□□ 0.54
RTCAO00442 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC18.42■□□□□ 0.54
RTCAO00442 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC18.42■□□□□ 0.54
RTCAO00442 RNF121-214ENST00000533380 870 ntTSL 3 BASIC18.42■□□□□ 0.54
RTCAO00442 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC18.42■□□□□ 0.54
RTCAO00442 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC18.42■□□□□ 0.54
RTCAO00442 HLA-A-209ENST00000638375 975 ntBASIC18.42■□□□□ 0.54
RTCAO00442 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC18.42■□□□□ 0.54
RTCAO00442 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
RTCAO00442 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
RTCAO00442 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
RTCAO00442 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC18.42■□□□□ 0.54
RTCAO00442 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
RTCAO00442 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC18.42■□□□□ 0.54
RTCAO00442 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC18.42■□□□□ 0.54
RTCAO00442 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
RTCAO00442 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
RTCAO00442 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
RTCAO00442 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
RTCAO00442 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
RTCAO00442 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RTCAO00442 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC18.41■□□□□ 0.54
RTCAO00442 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC18.41■□□□□ 0.54
RTCAO00442 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC18.41■□□□□ 0.54
RTCAO00442 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
RTCAO00442 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
RTCAO00442 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC18.41■□□□□ 0.54
RTCAO00442 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC18.41■□□□□ 0.54
RTCAO00442 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC18.41■□□□□ 0.54
RTCAO00442 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
RTCAO00442 FAM197Y4-202ENST00000622692 608 ntBASIC18.41■□□□□ 0.54
RTCAO00442 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
RTCAO00442 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RTCAO00442 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RTCAO00442 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RTCAO00442 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
RTCAO00442 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RTCAO00442 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC18.41■□□□□ 0.54
RTCAO00442 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
RTCAO00442 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RTCAO00442 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
RTCAO00442 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RTCAO00442 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RTCAO00442 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC18.4■□□□□ 0.54
RTCAO00442 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC18.4■□□□□ 0.54
RTCAO00442 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
RTCAO00442 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
RTCAO00442 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
RTCAO00442 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
RTCAO00442 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
RTCAO00442 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RTCAO00442 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RTCAO00442 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
RTCAO00442 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
RTCAO00442 PEX7-202ENST00000367756 680 ntTSL 3 BASIC18.4■□□□□ 0.54
RTCAO00442 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC18.4■□□□□ 0.54
RTCAO00442 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RTCAO00442 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC18.4■□□□□ 0.54
RTCAO00442 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
RTCAO00442 AC142381.4-202ENST00000563973 229 ntBASIC18.4■□□□□ 0.54
RTCAO00442 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC18.4■□□□□ 0.54
RTCAO00442 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC18.4■□□□□ 0.54
RTCAO00442 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RTCAO00442 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
RTCAO00442 TEX21P-204ENST00000641479 1693 ntBASIC18.4■□□□□ 0.54
RTCAO00442 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC18.4■□□□□ 0.54
RTCAO00442 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RTCAO00442 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
RTCAO00442 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.54
RTCAO00442 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC18.39■□□□□ 0.53
RTCAO00442 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC18.39■□□□□ 0.53
RTCAO00442 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RTCAO00442 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RTCAO00442 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
RTCAO00442 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RTCAO00442 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC18.39■□□□□ 0.53
RTCAO00442 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
RTCAO00442 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RTCAO00442 AL158047.1-201ENST00000445918 881 ntBASIC18.39■□□□□ 0.53
RTCAO00442 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC18.39■□□□□ 0.53
RTCAO00442 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC18.39■□□□□ 0.53
RTCAO00442 SPIB-206ENST00000596074 847 ntTSL 2 BASIC18.39■□□□□ 0.53
RTCAO00442 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC18.39■□□□□ 0.53
RTCAO00442 CABP2-204ENST00000636477 941 ntTSL 5 BASIC18.39■□□□□ 0.53
RTCAO00442 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC18.39■□□□□ 0.53
RTCAO00442 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC18.39■□□□□ 0.53
RTCAO00442 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RTCAO00442 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC18.39■□□□□ 0.53
RTCAO00442 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
RTCAO00442 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
RTCAO00442 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RTCAO00442 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
RTCAO00442 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms