Protein–RNA interactions for Protein: O00311

CDC7, Cell division cycle 7-related protein kinase, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC7O00311 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC18.95■□□□□ 0.62
CDC7O00311 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CDC7O00311 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CDC7O00311 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CDC7O00311 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CDC7O00311 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CDC7O00311 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
CDC7O00311 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC18.95■□□□□ 0.62
CDC7O00311 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CDC7O00311 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC18.95■□□□□ 0.62
CDC7O00311 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC18.95■□□□□ 0.62
CDC7O00311 PRKY-204ENST00000533551 1019 ntBASIC18.95■□□□□ 0.62
CDC7O00311 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CDC7O00311 MTDHP1-201ENST00000605323 784 ntBASIC18.95■□□□□ 0.62
CDC7O00311 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CDC7O00311 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CDC7O00311 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CDC7O00311 NBPF21P-201ENST00000425093 1451 ntBASIC18.95■□□□□ 0.62
CDC7O00311 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC18.95■□□□□ 0.62
CDC7O00311 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC18.95■□□□□ 0.62
CDC7O00311 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC18.95■□□□□ 0.62
CDC7O00311 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CDC7O00311 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC18.95■□□□□ 0.62
CDC7O00311 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC18.95■□□□□ 0.62
CDC7O00311 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC18.95■□□□□ 0.62
CDC7O00311 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC18.95■□□□□ 0.62
CDC7O00311 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC18.95■□□□□ 0.62
CDC7O00311 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
CDC7O00311 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CDC7O00311 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CDC7O00311 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CDC7O00311 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CDC7O00311 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CDC7O00311 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC18.94■□□□□ 0.62
CDC7O00311 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
CDC7O00311 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CDC7O00311 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC18.94■□□□□ 0.62
CDC7O00311 KRT17P3-201ENST00000420566 1262 ntBASIC18.94■□□□□ 0.62
CDC7O00311 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC18.94■□□□□ 0.62
CDC7O00311 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC18.94■□□□□ 0.62
CDC7O00311 RHOD-202ENST00000532559 538 ntTSL 3 BASIC18.94■□□□□ 0.62
CDC7O00311 MMAB-206ENST00000540016 945 ntTSL 3 BASIC18.94■□□□□ 0.62
CDC7O00311 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC18.94■□□□□ 0.62
CDC7O00311 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
CDC7O00311 TBCB-214ENST00000629269 413 ntTSL 5 BASIC18.94■□□□□ 0.62
CDC7O00311 RNF165-205ENST00000588679 2904 ntBASIC18.94■□□□□ 0.62
CDC7O00311 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC18.94■□□□□ 0.62
CDC7O00311 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CDC7O00311 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
CDC7O00311 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
CDC7O00311 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CDC7O00311 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
CDC7O00311 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CDC7O00311 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CDC7O00311 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC18.94■□□□□ 0.62
CDC7O00311 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CDC7O00311 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CDC7O00311 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC18.93■□□□□ 0.62
CDC7O00311 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CDC7O00311 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
CDC7O00311 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CDC7O00311 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
CDC7O00311 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
CDC7O00311 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CDC7O00311 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CDC7O00311 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CDC7O00311 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
CDC7O00311 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC18.93■□□□□ 0.62
CDC7O00311 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC18.93■□□□□ 0.62
CDC7O00311 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CDC7O00311 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CDC7O00311 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC18.93■□□□□ 0.62
CDC7O00311 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
CDC7O00311 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC18.93■□□□□ 0.62
CDC7O00311 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
CDC7O00311 AC093503.3-201ENST00000624917 2352 ntBASIC18.93■□□□□ 0.62
CDC7O00311 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC18.93■□□□□ 0.62
CDC7O00311 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC18.92■□□□□ 0.62
CDC7O00311 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC18.92■□□□□ 0.62
CDC7O00311 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CDC7O00311 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CDC7O00311 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CDC7O00311 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CDC7O00311 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CDC7O00311 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC18.92■□□□□ 0.62
CDC7O00311 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CDC7O00311 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CDC7O00311 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CDC7O00311 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CDC7O00311 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CDC7O00311 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC18.92■□□□□ 0.62
CDC7O00311 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC18.92■□□□□ 0.62
CDC7O00311 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CDC7O00311 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC18.92■□□□□ 0.62
CDC7O00311 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CDC7O00311 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC18.92■□□□□ 0.62
CDC7O00311 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC18.92■□□□□ 0.62
CDC7O00311 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC18.92■□□□□ 0.62
CDC7O00311 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
CDC7O00311 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms