Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CCDC188H7C350 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
CCDC188H7C350 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
CCDC188H7C350 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC20.09■□□□□ 0.81
CCDC188H7C350 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
CCDC188H7C350 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CCDC188H7C350 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
CCDC188H7C350 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CCDC188H7C350 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
CCDC188H7C350 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CCDC188H7C350 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CCDC188H7C350 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC20.08■□□□□ 0.81
CCDC188H7C350 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CCDC188H7C350 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC20.08■□□□□ 0.81
CCDC188H7C350 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC20.08■□□□□ 0.81
CCDC188H7C350 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CCDC188H7C350 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CCDC188H7C350 GPX1P1-201ENST00000388829 606 ntBASIC20.08■□□□□ 0.81
CCDC188H7C350 AL512625.2-201ENST00000417533 625 ntBASIC20.08■□□□□ 0.81
CCDC188H7C350 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC20.08■□□□□ 0.81
CCDC188H7C350 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC20.08■□□□□ 0.81
CCDC188H7C350 AC231657.2-201ENST00000624556 255 ntBASIC20.08■□□□□ 0.81
CCDC188H7C350 PARP1-210ENST00000629232 477 ntTSL 5 BASIC20.08■□□□□ 0.81
CCDC188H7C350 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC20.08■□□□□ 0.8
CCDC188H7C350 SDHAP1-207ENST00000440850 2000 ntBASIC20.08■□□□□ 0.8
CCDC188H7C350 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC20.08■□□□□ 0.8
CCDC188H7C350 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC20.08■□□□□ 0.8
CCDC188H7C350 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
CCDC188H7C350 EFTUD1P1-204ENST00000560401 1798 ntBASIC20.08■□□□□ 0.8
CCDC188H7C350 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC20.08■□□□□ 0.8
CCDC188H7C350 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC20.08■□□□□ 0.8
CCDC188H7C350 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
CCDC188H7C350 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC20.08■□□□□ 0.8
CCDC188H7C350 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
CCDC188H7C350 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
CCDC188H7C350 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
CCDC188H7C350 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC20.08■□□□□ 0.8
CCDC188H7C350 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CCDC188H7C350 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC20.07■□□□□ 0.8
CCDC188H7C350 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
CCDC188H7C350 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
CCDC188H7C350 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CCDC188H7C350 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CCDC188H7C350 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CCDC188H7C350 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
CCDC188H7C350 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC20.07■□□□□ 0.8
CCDC188H7C350 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CCDC188H7C350 AC016769.1-201ENST00000409132 1010 ntBASIC20.07■□□□□ 0.8
CCDC188H7C350 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CCDC188H7C350 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC20.07■□□□□ 0.8
CCDC188H7C350 AC011767.1-201ENST00000617410 1153 ntBASIC20.07■□□□□ 0.8
CCDC188H7C350 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CCDC188H7C350 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CCDC188H7C350 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
CCDC188H7C350 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC20.06■□□□□ 0.8
CCDC188H7C350 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CCDC188H7C350 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CCDC188H7C350 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CCDC188H7C350 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC20.06■□□□□ 0.8
CCDC188H7C350 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
CCDC188H7C350 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
CCDC188H7C350 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
CCDC188H7C350 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CCDC188H7C350 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
CCDC188H7C350 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CCDC188H7C350 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
CCDC188H7C350 AL354751.1-201ENST00000412768 1863 ntBASIC20.06■□□□□ 0.8
CCDC188H7C350 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC20.06■□□□□ 0.8
CCDC188H7C350 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CCDC188H7C350 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC20.06■□□□□ 0.8
CCDC188H7C350 NME1-207ENST00000480143 964 ntTSL 2 BASIC20.06■□□□□ 0.8
CCDC188H7C350 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CCDC188H7C350 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC20.06■□□□□ 0.8
CCDC188H7C350 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CCDC188H7C350 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
CCDC188H7C350 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
CCDC188H7C350 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
CCDC188H7C350 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CCDC188H7C350 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CCDC188H7C350 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
CCDC188H7C350 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CCDC188H7C350 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC20.05■□□□□ 0.8
CCDC188H7C350 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CCDC188H7C350 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
CCDC188H7C350 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CCDC188H7C350 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC20.05■□□□□ 0.8
CCDC188H7C350 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC20.05■□□□□ 0.8
CCDC188H7C350 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC20.05■□□□□ 0.8
CCDC188H7C350 AC073210.2-201ENST00000430369 194 ntBASIC20.05■□□□□ 0.8
CCDC188H7C350 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CCDC188H7C350 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC20.05■□□□□ 0.8
CCDC188H7C350 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC20.05■□□□□ 0.8
CCDC188H7C350 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CCDC188H7C350 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC20.05■□□□□ 0.8
CCDC188H7C350 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC20.05■□□□□ 0.8
CCDC188H7C350 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CCDC188H7C350 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
CCDC188H7C350 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC20.05■□□□□ 0.8
CCDC188H7C350 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC20.05■□□□□ 0.8
CCDC188H7C350 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 18.4 ms