Protein–RNA interactions for Protein: D6REC4

CFAP99, Cilia- and flagella-associated protein 99, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP99D6REC4 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CFAP99D6REC4 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CFAP99D6REC4 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
CFAP99D6REC4 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
CFAP99D6REC4 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CFAP99D6REC4 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
CFAP99D6REC4 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
CFAP99D6REC4 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
CFAP99D6REC4 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CFAP99D6REC4 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC19.25■□□□□ 0.67
CFAP99D6REC4 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC19.25■□□□□ 0.67
CFAP99D6REC4 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
CFAP99D6REC4 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
CFAP99D6REC4 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
CFAP99D6REC4 PEX7-202ENST00000367756 680 ntTSL 3 BASIC19.25■□□□□ 0.67
CFAP99D6REC4 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC19.25■□□□□ 0.67
CFAP99D6REC4 AL353807.1-201ENST00000427475 662 ntBASIC19.25■□□□□ 0.67
CFAP99D6REC4 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC19.25■□□□□ 0.67
CFAP99D6REC4 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC19.25■□□□□ 0.67
CFAP99D6REC4 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC19.25■□□□□ 0.67
CFAP99D6REC4 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
CFAP99D6REC4 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CFAP99D6REC4 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CFAP99D6REC4 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
CFAP99D6REC4 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
CFAP99D6REC4 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC19.24■□□□□ 0.67
CFAP99D6REC4 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CFAP99D6REC4 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC19.24■□□□□ 0.67
CFAP99D6REC4 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CFAP99D6REC4 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
CFAP99D6REC4 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CFAP99D6REC4 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CFAP99D6REC4 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC19.24■□□□□ 0.67
CFAP99D6REC4 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC19.24■□□□□ 0.67
CFAP99D6REC4 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
CFAP99D6REC4 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC19.24■□□□□ 0.67
CFAP99D6REC4 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CFAP99D6REC4 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC19.24■□□□□ 0.67
CFAP99D6REC4 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CFAP99D6REC4 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC19.24■□□□□ 0.67
CFAP99D6REC4 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CFAP99D6REC4 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CFAP99D6REC4 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
CFAP99D6REC4 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC19.24■□□□□ 0.67
CFAP99D6REC4 HCG11-201ENST00000411553 5696 ntBASIC19.24■□□□□ 0.67
CFAP99D6REC4 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CFAP99D6REC4 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CFAP99D6REC4 AL135905.2-201ENST00000584934 1404 ntBASIC19.24■□□□□ 0.67
CFAP99D6REC4 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
CFAP99D6REC4 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC19.24■□□□□ 0.67
CFAP99D6REC4 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CFAP99D6REC4 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CFAP99D6REC4 PWWP2AP1-201ENST00000429776 2273 ntBASIC19.23■□□□□ 0.67
CFAP99D6REC4 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC19.23■□□□□ 0.67
CFAP99D6REC4 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CFAP99D6REC4 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CFAP99D6REC4 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CFAP99D6REC4 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC19.23■□□□□ 0.67
CFAP99D6REC4 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CFAP99D6REC4 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC19.23■□□□□ 0.67
CFAP99D6REC4 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC19.23■□□□□ 0.67
CFAP99D6REC4 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
CFAP99D6REC4 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CFAP99D6REC4 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC19.23■□□□□ 0.67
CFAP99D6REC4 BAALC-201ENST00000297574 801 ntTSL 3 BASIC19.23■□□□□ 0.67
CFAP99D6REC4 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
CFAP99D6REC4 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CFAP99D6REC4 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CFAP99D6REC4 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CFAP99D6REC4 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC19.23■□□□□ 0.67
CFAP99D6REC4 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC19.23■□□□□ 0.67
CFAP99D6REC4 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC19.23■□□□□ 0.67
CFAP99D6REC4 RARRES2P10-201ENST00000564312 460 ntBASIC19.23■□□□□ 0.67
CFAP99D6REC4 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC19.23■□□□□ 0.67
CFAP99D6REC4 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC19.23■□□□□ 0.67
CFAP99D6REC4 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CFAP99D6REC4 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
CFAP99D6REC4 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC19.23■□□□□ 0.67
CFAP99D6REC4 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CFAP99D6REC4 HTR7P1-201ENST00000538670 1336 ntBASIC19.23■□□□□ 0.67
CFAP99D6REC4 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
CFAP99D6REC4 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
CFAP99D6REC4 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CFAP99D6REC4 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CFAP99D6REC4 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC19.22■□□□□ 0.67
CFAP99D6REC4 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.22■□□□□ 0.67
CFAP99D6REC4 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC19.22■□□□□ 0.67
CFAP99D6REC4 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CFAP99D6REC4 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CFAP99D6REC4 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.22■□□□□ 0.67
CFAP99D6REC4 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC19.22■□□□□ 0.67
CFAP99D6REC4 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.22■□□□□ 0.67
CFAP99D6REC4 AP002982.1-201ENST00000492365 877 ntBASIC19.22■□□□□ 0.67
CFAP99D6REC4 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC19.22■□□□□ 0.67
CFAP99D6REC4 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC19.22■□□□□ 0.67
CFAP99D6REC4 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CFAP99D6REC4 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CFAP99D6REC4 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC19.22■□□□□ 0.67
CFAP99D6REC4 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CFAP99D6REC4 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms