Protein–RNA interactions for Protein: A8K010

LINC00473, Putative transcriptional regulator encoded by LINC00473, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00473A8K010 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
LINC00473A8K010 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC15.72■□□□□ 0.11
LINC00473A8K010 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC15.72■□□□□ 0.11
LINC00473A8K010 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
LINC00473A8K010 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC15.71■□□□□ 0.11
LINC00473A8K010 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
LINC00473A8K010 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
LINC00473A8K010 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
LINC00473A8K010 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
LINC00473A8K010 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC15.71■□□□□ 0.11
LINC00473A8K010 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
LINC00473A8K010 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
LINC00473A8K010 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC15.71■□□□□ 0.11
LINC00473A8K010 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
LINC00473A8K010 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
LINC00473A8K010 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
LINC00473A8K010 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
LINC00473A8K010 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
LINC00473A8K010 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC15.71■□□□□ 0.11
LINC00473A8K010 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
LINC00473A8K010 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC15.71■□□□□ 0.11
LINC00473A8K010 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC15.71■□□□□ 0.11
LINC00473A8K010 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
LINC00473A8K010 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC15.71■□□□□ 0.11
LINC00473A8K010 SOX15-203ENST00000570788 1093 ntBASIC15.71■□□□□ 0.11
LINC00473A8K010 KLF2-202ENST00000592003 564 ntTSL 3 BASIC15.71■□□□□ 0.11
LINC00473A8K010 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC15.71■□□□□ 0.11
LINC00473A8K010 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
LINC00473A8K010 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC15.71■□□□□ 0.11
LINC00473A8K010 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
LINC00473A8K010 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
LINC00473A8K010 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
LINC00473A8K010 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
LINC00473A8K010 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC15.71■□□□□ 0.1
LINC00473A8K010 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
LINC00473A8K010 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.1
LINC00473A8K010 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
LINC00473A8K010 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.1
LINC00473A8K010 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.1
LINC00473A8K010 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
LINC00473A8K010 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC15.7■□□□□ 0.1
LINC00473A8K010 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
LINC00473A8K010 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
LINC00473A8K010 NEFHP1-201ENST00000412845 2629 ntBASIC15.7■□□□□ 0.1
LINC00473A8K010 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
LINC00473A8K010 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
LINC00473A8K010 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC15.7■□□□□ 0.1
LINC00473A8K010 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC15.7■□□□□ 0.1
LINC00473A8K010 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
LINC00473A8K010 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
LINC00473A8K010 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC15.7■□□□□ 0.1
LINC00473A8K010 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC15.7■□□□□ 0.1
LINC00473A8K010 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC15.7■□□□□ 0.1
LINC00473A8K010 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC15.7■□□□□ 0.1
LINC00473A8K010 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC15.7■□□□□ 0.1
LINC00473A8K010 KRT18P16-201ENST00000510337 1294 ntBASIC15.7■□□□□ 0.1
LINC00473A8K010 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
LINC00473A8K010 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC15.7■□□□□ 0.1
LINC00473A8K010 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC15.7■□□□□ 0.1
LINC00473A8K010 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC15.7■□□□□ 0.1
LINC00473A8K010 AL121829.2-201ENST00000620908 328 ntBASIC15.7■□□□□ 0.1
LINC00473A8K010 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
LINC00473A8K010 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
LINC00473A8K010 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
LINC00473A8K010 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
LINC00473A8K010 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
LINC00473A8K010 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
LINC00473A8K010 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
LINC00473A8K010 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC15.7■□□□□ 0.1
LINC00473A8K010 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
LINC00473A8K010 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
LINC00473A8K010 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
LINC00473A8K010 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC15.7■□□□□ 0.1
LINC00473A8K010 AIRN-201ENST00000601203 4374 ntBASIC15.7■□□□□ 0.1
LINC00473A8K010 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
LINC00473A8K010 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC15.7■□□□□ 0.1
LINC00473A8K010 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
LINC00473A8K010 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
LINC00473A8K010 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC15.69■□□□□ 0.1
LINC00473A8K010 FP475955.4-201ENST00000623131 1990 ntBASIC15.69■□□□□ 0.1
LINC00473A8K010 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
LINC00473A8K010 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
LINC00473A8K010 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
LINC00473A8K010 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
LINC00473A8K010 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
LINC00473A8K010 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC15.69■□□□□ 0.1
LINC00473A8K010 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
LINC00473A8K010 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC15.69■□□□□ 0.1
LINC00473A8K010 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
LINC00473A8K010 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
LINC00473A8K010 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
LINC00473A8K010 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC15.69■□□□□ 0.1
LINC00473A8K010 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC15.69■□□□□ 0.1
LINC00473A8K010 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC15.69■□□□□ 0.1
LINC00473A8K010 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC15.69■□□□□ 0.1
LINC00473A8K010 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC15.69■□□□□ 0.1
LINC00473A8K010 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
LINC00473A8K010 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC15.69■□□□□ 0.1
LINC00473A8K010 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC15.69■□□□□ 0.1
LINC00473A8K010 AC008687.6-201ENST00000596318 630 ntBASIC15.69■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms