Protein–RNA interactions for Protein: A6NFC5

TMEM235, Transmembrane protein 235, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM235A6NFC5 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
TMEM235A6NFC5 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC16.49■□□□□ 0.23
TMEM235A6NFC5 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
TMEM235A6NFC5 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC16.49■□□□□ 0.23
TMEM235A6NFC5 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
TMEM235A6NFC5 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
TMEM235A6NFC5 CYP2T3P-201ENST00000601990 817 ntBASIC16.49■□□□□ 0.23
TMEM235A6NFC5 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC16.49■□□□□ 0.23
TMEM235A6NFC5 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
TMEM235A6NFC5 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TMEM235A6NFC5 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TMEM235A6NFC5 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
TMEM235A6NFC5 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC16.49■□□□□ 0.23
TMEM235A6NFC5 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TMEM235A6NFC5 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
TMEM235A6NFC5 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
TMEM235A6NFC5 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TMEM235A6NFC5 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC16.49■□□□□ 0.23
TMEM235A6NFC5 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TMEM235A6NFC5 AL031598.1-201ENST00000561511 1773 ntBASIC16.49■□□□□ 0.23
TMEM235A6NFC5 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
TMEM235A6NFC5 AC079598.2-202ENST00000546624 1451 ntBASIC16.48■□□□□ 0.23
TMEM235A6NFC5 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TMEM235A6NFC5 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC16.48■□□□□ 0.23
TMEM235A6NFC5 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TMEM235A6NFC5 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
TMEM235A6NFC5 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
TMEM235A6NFC5 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TMEM235A6NFC5 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC16.48■□□□□ 0.23
TMEM235A6NFC5 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC16.48■□□□□ 0.23
TMEM235A6NFC5 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC16.48■□□□□ 0.23
TMEM235A6NFC5 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC16.48■□□□□ 0.23
TMEM235A6NFC5 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC16.48■□□□□ 0.23
TMEM235A6NFC5 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
TMEM235A6NFC5 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TMEM235A6NFC5 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TMEM235A6NFC5 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC16.48■□□□□ 0.23
TMEM235A6NFC5 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
TMEM235A6NFC5 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
TMEM235A6NFC5 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC16.47■□□□□ 0.23
TMEM235A6NFC5 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TMEM235A6NFC5 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TMEM235A6NFC5 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TMEM235A6NFC5 USP39-202ENST00000409025 1946 ntTSL 5 BASIC16.47■□□□□ 0.23
TMEM235A6NFC5 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
TMEM235A6NFC5 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TMEM235A6NFC5 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
TMEM235A6NFC5 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
TMEM235A6NFC5 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC16.47■□□□□ 0.23
TMEM235A6NFC5 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC16.47■□□□□ 0.23
TMEM235A6NFC5 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
TMEM235A6NFC5 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TMEM235A6NFC5 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TMEM235A6NFC5 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
TMEM235A6NFC5 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
TMEM235A6NFC5 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC16.47■□□□□ 0.23
TMEM235A6NFC5 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC16.47■□□□□ 0.23
TMEM235A6NFC5 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
TMEM235A6NFC5 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
TMEM235A6NFC5 FP475955.4-201ENST00000623131 1990 ntBASIC16.47■□□□□ 0.23
TMEM235A6NFC5 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
TMEM235A6NFC5 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC16.47■□□□□ 0.23
TMEM235A6NFC5 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TMEM235A6NFC5 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
TMEM235A6NFC5 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TMEM235A6NFC5 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TMEM235A6NFC5 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
TMEM235A6NFC5 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TMEM235A6NFC5 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
TMEM235A6NFC5 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TMEM235A6NFC5 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC16.47■□□□□ 0.23
TMEM235A6NFC5 AC116351.2-201ENST00000606540 1585 ntBASIC16.47■□□□□ 0.23
TMEM235A6NFC5 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TMEM235A6NFC5 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
TMEM235A6NFC5 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
TMEM235A6NFC5 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC16.46■□□□□ 0.23
TMEM235A6NFC5 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC16.46■□□□□ 0.23
TMEM235A6NFC5 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
TMEM235A6NFC5 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC16.46■□□□□ 0.23
TMEM235A6NFC5 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TMEM235A6NFC5 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TMEM235A6NFC5 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TMEM235A6NFC5 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC16.46■□□□□ 0.23
TMEM235A6NFC5 ZNF815P-204ENST00000434898 1737 ntBASIC16.46■□□□□ 0.23
TMEM235A6NFC5 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TMEM235A6NFC5 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TMEM235A6NFC5 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TMEM235A6NFC5 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TMEM235A6NFC5 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
TMEM235A6NFC5 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
TMEM235A6NFC5 AL355472.2-201ENST00000422958 438 ntBASIC16.46■□□□□ 0.23
TMEM235A6NFC5 SPI1-203ENST00000533030 661 ntTSL 2 BASIC16.46■□□□□ 0.23
TMEM235A6NFC5 DBI-210ENST00000542275 757 ntTSL 5 BASIC16.46■□□□□ 0.23
TMEM235A6NFC5 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC16.46■□□□□ 0.23
TMEM235A6NFC5 AL133373.2-201ENST00000623187 2828 ntBASIC16.46■□□□□ 0.23
TMEM235A6NFC5 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
TMEM235A6NFC5 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC16.46■□□□□ 0.23
TMEM235A6NFC5 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
TMEM235A6NFC5 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC16.46■□□□□ 0.23
TMEM235A6NFC5 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms