Protein–RNA interactions for Protein: A2VCL2

CCDC162P, Coiled-coil domain-containing protein 162, humanhuman

Predictions only

Length 907 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC162PA2VCL2 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CCDC162PA2VCL2 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CCDC162PA2VCL2 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CCDC162PA2VCL2 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
CCDC162PA2VCL2 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CCDC162PA2VCL2 LETM1P2-201ENST00000597330 2178 ntBASIC19.32■□□□□ 0.68
CCDC162PA2VCL2 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC19.32■□□□□ 0.68
CCDC162PA2VCL2 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC19.32■□□□□ 0.68
CCDC162PA2VCL2 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC19.31■□□□□ 0.68
CCDC162PA2VCL2 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC19.31■□□□□ 0.68
CCDC162PA2VCL2 LINC01465-201ENST00000408887 1940 ntBASIC19.31■□□□□ 0.68
CCDC162PA2VCL2 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CCDC162PA2VCL2 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC19.31■□□□□ 0.68
CCDC162PA2VCL2 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CCDC162PA2VCL2 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
CCDC162PA2VCL2 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC19.31■□□□□ 0.68
CCDC162PA2VCL2 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CCDC162PA2VCL2 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
CCDC162PA2VCL2 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC19.31■□□□□ 0.68
CCDC162PA2VCL2 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC19.31■□□□□ 0.68
CCDC162PA2VCL2 FAM201B-201ENST00000458407 597 ntBASIC19.31■□□□□ 0.68
CCDC162PA2VCL2 AC133681.1-201ENST00000465482 601 ntBASIC19.31■□□□□ 0.68
CCDC162PA2VCL2 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CCDC162PA2VCL2 C1QL1P1-201ENST00000568105 661 ntBASIC19.31■□□□□ 0.68
CCDC162PA2VCL2 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC19.31■□□□□ 0.68
CCDC162PA2VCL2 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
CCDC162PA2VCL2 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CCDC162PA2VCL2 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CCDC162PA2VCL2 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
CCDC162PA2VCL2 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC19.31■□□□□ 0.68
CCDC162PA2VCL2 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CCDC162PA2VCL2 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
CCDC162PA2VCL2 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
CCDC162PA2VCL2 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CCDC162PA2VCL2 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CCDC162PA2VCL2 TEX21P-204ENST00000641479 1693 ntBASIC19.3■□□□□ 0.68
CCDC162PA2VCL2 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
CCDC162PA2VCL2 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
CCDC162PA2VCL2 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
CCDC162PA2VCL2 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC19.3■□□□□ 0.68
CCDC162PA2VCL2 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CCDC162PA2VCL2 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CCDC162PA2VCL2 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CCDC162PA2VCL2 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC19.3■□□□□ 0.68
CCDC162PA2VCL2 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC19.3■□□□□ 0.68
CCDC162PA2VCL2 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC19.3■□□□□ 0.68
CCDC162PA2VCL2 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC19.3■□□□□ 0.68
CCDC162PA2VCL2 MMD2-204ENST00000612910 778 ntTSL 5 BASIC19.3■□□□□ 0.68
CCDC162PA2VCL2 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CCDC162PA2VCL2 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
CCDC162PA2VCL2 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CCDC162PA2VCL2 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CCDC162PA2VCL2 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC19.3■□□□□ 0.68
CCDC162PA2VCL2 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CCDC162PA2VCL2 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC19.3■□□□□ 0.68
CCDC162PA2VCL2 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC19.3■□□□□ 0.68
CCDC162PA2VCL2 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC19.3■□□□□ 0.68
CCDC162PA2VCL2 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC19.29■□□□□ 0.68
CCDC162PA2VCL2 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CCDC162PA2VCL2 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CCDC162PA2VCL2 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC19.29■□□□□ 0.68
CCDC162PA2VCL2 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC19.29■□□□□ 0.68
CCDC162PA2VCL2 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
CCDC162PA2VCL2 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CCDC162PA2VCL2 AC087289.5-201ENST00000586076 3175 ntBASIC19.29■□□□□ 0.68
CCDC162PA2VCL2 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
CCDC162PA2VCL2 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
CCDC162PA2VCL2 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC19.29■□□□□ 0.68
CCDC162PA2VCL2 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CCDC162PA2VCL2 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
CCDC162PA2VCL2 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
CCDC162PA2VCL2 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CCDC162PA2VCL2 KRT16P5-201ENST00000455284 522 ntBASIC19.29■□□□□ 0.68
CCDC162PA2VCL2 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
CCDC162PA2VCL2 AC110285.5-201ENST00000611501 352 ntBASIC19.29■□□□□ 0.68
CCDC162PA2VCL2 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
CCDC162PA2VCL2 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CCDC162PA2VCL2 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CCDC162PA2VCL2 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC19.29■□□□□ 0.68
CCDC162PA2VCL2 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
CCDC162PA2VCL2 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC19.29■□□□□ 0.68
CCDC162PA2VCL2 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC19.29■□□□□ 0.68
CCDC162PA2VCL2 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CCDC162PA2VCL2 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CCDC162PA2VCL2 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC19.29■□□□□ 0.68
CCDC162PA2VCL2 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
CCDC162PA2VCL2 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC19.28■□□□□ 0.68
CCDC162PA2VCL2 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC19.28■□□□□ 0.68
CCDC162PA2VCL2 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC162PA2VCL2 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC162PA2VCL2 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
CCDC162PA2VCL2 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
CCDC162PA2VCL2 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
CCDC162PA2VCL2 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC162PA2VCL2 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC19.28■□□□□ 0.68
CCDC162PA2VCL2 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC162PA2VCL2 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC19.28■□□□□ 0.68
CCDC162PA2VCL2 C1QBPP2-201ENST00000528754 825 ntBASIC19.28■□□□□ 0.68
CCDC162PA2VCL2 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC19.28■□□□□ 0.68
CCDC162PA2VCL2 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC19.28■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 13.9 ms