Protein–RNA interactions for Protein: A0A0C4DH59

TRBV5-4, T-cell receptor beta variable 5-4 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-4A0A0C4DH59 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC19.04■□□□□ 0.64
TRBV5-4A0A0C4DH59 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
TRBV5-4A0A0C4DH59 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC19.04■□□□□ 0.64
TRBV5-4A0A0C4DH59 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TRBV5-4A0A0C4DH59 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TRBV5-4A0A0C4DH59 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC19.04■□□□□ 0.64
TRBV5-4A0A0C4DH59 FAM197Y1-201ENST00000421178 764 ntBASIC19.04■□□□□ 0.64
TRBV5-4A0A0C4DH59 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC19.04■□□□□ 0.64
TRBV5-4A0A0C4DH59 TSPY21P-201ENST00000433481 731 ntBASIC19.04■□□□□ 0.64
TRBV5-4A0A0C4DH59 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
TRBV5-4A0A0C4DH59 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC19.04■□□□□ 0.64
TRBV5-4A0A0C4DH59 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC19.04■□□□□ 0.64
TRBV5-4A0A0C4DH59 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC19.04■□□□□ 0.64
TRBV5-4A0A0C4DH59 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC19.04■□□□□ 0.64
TRBV5-4A0A0C4DH59 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC19.04■□□□□ 0.64
TRBV5-4A0A0C4DH59 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC19.04■□□□□ 0.64
TRBV5-4A0A0C4DH59 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC19.04■□□□□ 0.64
TRBV5-4A0A0C4DH59 AP001412.1-201ENST00000608405 714 ntBASIC19.04■□□□□ 0.64
TRBV5-4A0A0C4DH59 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC19.04■□□□□ 0.64
TRBV5-4A0A0C4DH59 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
TRBV5-4A0A0C4DH59 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TRBV5-4A0A0C4DH59 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC19.04■□□□□ 0.64
TRBV5-4A0A0C4DH59 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC19.04■□□□□ 0.64
TRBV5-4A0A0C4DH59 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
TRBV5-4A0A0C4DH59 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TRBV5-4A0A0C4DH59 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TRBV5-4A0A0C4DH59 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
TRBV5-4A0A0C4DH59 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
TRBV5-4A0A0C4DH59 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
TRBV5-4A0A0C4DH59 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
TRBV5-4A0A0C4DH59 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC19.03■□□□□ 0.64
TRBV5-4A0A0C4DH59 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC19.03■□□□□ 0.64
TRBV5-4A0A0C4DH59 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
TRBV5-4A0A0C4DH59 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
TRBV5-4A0A0C4DH59 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TRBV5-4A0A0C4DH59 RCC2P6-201ENST00000526625 1557 ntBASIC19.03■□□□□ 0.64
TRBV5-4A0A0C4DH59 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC19.03■□□□□ 0.64
TRBV5-4A0A0C4DH59 MDFI-202ENST00000373050 809 ntTSL 2 BASIC19.03■□□□□ 0.64
TRBV5-4A0A0C4DH59 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TRBV5-4A0A0C4DH59 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
TRBV5-4A0A0C4DH59 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC19.03■□□□□ 0.64
TRBV5-4A0A0C4DH59 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
TRBV5-4A0A0C4DH59 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC19.03■□□□□ 0.64
TRBV5-4A0A0C4DH59 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC19.03■□□□□ 0.64
TRBV5-4A0A0C4DH59 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC19.03■□□□□ 0.64
TRBV5-4A0A0C4DH59 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC19.03■□□□□ 0.64
TRBV5-4A0A0C4DH59 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC19.03■□□□□ 0.64
TRBV5-4A0A0C4DH59 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC19.03■□□□□ 0.64
TRBV5-4A0A0C4DH59 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
TRBV5-4A0A0C4DH59 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
TRBV5-4A0A0C4DH59 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
TRBV5-4A0A0C4DH59 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TRBV5-4A0A0C4DH59 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TRBV5-4A0A0C4DH59 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TRBV5-4A0A0C4DH59 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TRBV5-4A0A0C4DH59 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC19.02■□□□□ 0.64
TRBV5-4A0A0C4DH59 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC19.02■□□□□ 0.64
TRBV5-4A0A0C4DH59 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TRBV5-4A0A0C4DH59 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
TRBV5-4A0A0C4DH59 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TRBV5-4A0A0C4DH59 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC19.02■□□□□ 0.64
TRBV5-4A0A0C4DH59 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC19.02■□□□□ 0.64
TRBV5-4A0A0C4DH59 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TRBV5-4A0A0C4DH59 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TRBV5-4A0A0C4DH59 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TRBV5-4A0A0C4DH59 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TRBV5-4A0A0C4DH59 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
TRBV5-4A0A0C4DH59 MESTP1-201ENST00000404287 994 ntBASIC19.02■□□□□ 0.64
TRBV5-4A0A0C4DH59 TSPY23P-201ENST00000440136 739 ntBASIC19.02■□□□□ 0.64
TRBV5-4A0A0C4DH59 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC19.02■□□□□ 0.64
TRBV5-4A0A0C4DH59 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
TRBV5-4A0A0C4DH59 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC19.02■□□□□ 0.64
TRBV5-4A0A0C4DH59 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
TRBV5-4A0A0C4DH59 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC19.02■□□□□ 0.64
TRBV5-4A0A0C4DH59 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC19.02■□□□□ 0.64
TRBV5-4A0A0C4DH59 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TRBV5-4A0A0C4DH59 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC19.02■□□□□ 0.64
TRBV5-4A0A0C4DH59 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
TRBV5-4A0A0C4DH59 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TRBV5-4A0A0C4DH59 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC19.02■□□□□ 0.64
TRBV5-4A0A0C4DH59 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
TRBV5-4A0A0C4DH59 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
TRBV5-4A0A0C4DH59 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC19.02■□□□□ 0.63
TRBV5-4A0A0C4DH59 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
TRBV5-4A0A0C4DH59 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
TRBV5-4A0A0C4DH59 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
TRBV5-4A0A0C4DH59 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC19.01■□□□□ 0.63
TRBV5-4A0A0C4DH59 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TRBV5-4A0A0C4DH59 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TRBV5-4A0A0C4DH59 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
TRBV5-4A0A0C4DH59 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TRBV5-4A0A0C4DH59 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TRBV5-4A0A0C4DH59 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC19.01■□□□□ 0.63
TRBV5-4A0A0C4DH59 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
TRBV5-4A0A0C4DH59 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
TRBV5-4A0A0C4DH59 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
TRBV5-4A0A0C4DH59 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC19.01■□□□□ 0.63
TRBV5-4A0A0C4DH59 AC011506.1-201ENST00000474329 610 ntBASIC19.01■□□□□ 0.63
TRBV5-4A0A0C4DH59 AC091390.4-202ENST00000476426 537 ntBASIC19.01■□□□□ 0.63
TRBV5-4A0A0C4DH59 AC116562.2-201ENST00000507042 360 ntBASIC19.01■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms