Protein–RNA interactions for Protein: A0A0B4J268

TRAV4, T-cell receptor alpha variable 4 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV4A0A0B4J268 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TRAV4A0A0B4J268 YBX1P10-201ENST00000444752 975 ntBASIC13.92□□□□□ -0.18
TRAV4A0A0B4J268 SLC29A4P2-201ENST00000504749 1089 ntBASIC13.92□□□□□ -0.18
TRAV4A0A0B4J268 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC13.92□□□□□ -0.18
TRAV4A0A0B4J268 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC13.92□□□□□ -0.18
TRAV4A0A0B4J268 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC13.92□□□□□ -0.18
TRAV4A0A0B4J268 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC13.92□□□□□ -0.18
TRAV4A0A0B4J268 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC13.92□□□□□ -0.18
TRAV4A0A0B4J268 AC120498.8-201ENST00000614275 531 ntBASIC13.92□□□□□ -0.18
TRAV4A0A0B4J268 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TRAV4A0A0B4J268 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TRAV4A0A0B4J268 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC13.92□□□□□ -0.18
TRAV4A0A0B4J268 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TRAV4A0A0B4J268 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
TRAV4A0A0B4J268 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC13.92□□□□□ -0.18
TRAV4A0A0B4J268 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC13.92□□□□□ -0.18
TRAV4A0A0B4J268 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TRAV4A0A0B4J268 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TRAV4A0A0B4J268 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
TRAV4A0A0B4J268 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC13.92□□□□□ -0.18
TRAV4A0A0B4J268 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
TRAV4A0A0B4J268 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
TRAV4A0A0B4J268 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TRAV4A0A0B4J268 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TRAV4A0A0B4J268 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
TRAV4A0A0B4J268 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
TRAV4A0A0B4J268 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC13.91□□□□□ -0.18
TRAV4A0A0B4J268 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
TRAV4A0A0B4J268 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
TRAV4A0A0B4J268 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
TRAV4A0A0B4J268 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
TRAV4A0A0B4J268 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
TRAV4A0A0B4J268 BX323043.1-201ENST00000641006 1765 ntBASIC13.91□□□□□ -0.18
TRAV4A0A0B4J268 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
TRAV4A0A0B4J268 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
TRAV4A0A0B4J268 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
TRAV4A0A0B4J268 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
TRAV4A0A0B4J268 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
TRAV4A0A0B4J268 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
TRAV4A0A0B4J268 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC13.91□□□□□ -0.18
TRAV4A0A0B4J268 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC13.91□□□□□ -0.18
TRAV4A0A0B4J268 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC13.91□□□□□ -0.18
TRAV4A0A0B4J268 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC13.91□□□□□ -0.18
TRAV4A0A0B4J268 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC13.91□□□□□ -0.18
TRAV4A0A0B4J268 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
TRAV4A0A0B4J268 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC13.91□□□□□ -0.18
TRAV4A0A0B4J268 SOX15-203ENST00000570788 1093 ntBASIC13.91□□□□□ -0.18
TRAV4A0A0B4J268 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC13.91□□□□□ -0.18
TRAV4A0A0B4J268 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
TRAV4A0A0B4J268 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC13.91□□□□□ -0.18
TRAV4A0A0B4J268 AR-207ENST00000612010 3896 ntTSL 5 BASIC13.91□□□□□ -0.18
TRAV4A0A0B4J268 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
TRAV4A0A0B4J268 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
TRAV4A0A0B4J268 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
TRAV4A0A0B4J268 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC13.91□□□□□ -0.18
TRAV4A0A0B4J268 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC13.9□□□□□ -0.18
TRAV4A0A0B4J268 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.18
TRAV4A0A0B4J268 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRAV4A0A0B4J268 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRAV4A0A0B4J268 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRAV4A0A0B4J268 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRAV4A0A0B4J268 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
TRAV4A0A0B4J268 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
TRAV4A0A0B4J268 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC13.9□□□□□ -0.18
TRAV4A0A0B4J268 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRAV4A0A0B4J268 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRAV4A0A0B4J268 AC098818.2-201ENST00000564925 2320 ntBASIC13.9□□□□□ -0.18
TRAV4A0A0B4J268 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRAV4A0A0B4J268 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRAV4A0A0B4J268 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRAV4A0A0B4J268 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC13.9□□□□□ -0.18
TRAV4A0A0B4J268 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
TRAV4A0A0B4J268 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC13.9□□□□□ -0.18
TRAV4A0A0B4J268 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC13.9□□□□□ -0.18
TRAV4A0A0B4J268 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
TRAV4A0A0B4J268 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
TRAV4A0A0B4J268 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC13.9□□□□□ -0.18
TRAV4A0A0B4J268 AC008687.6-201ENST00000596318 630 ntBASIC13.9□□□□□ -0.18
TRAV4A0A0B4J268 INO80E-214ENST00000620599 515 ntTSL 2 BASIC13.9□□□□□ -0.18
TRAV4A0A0B4J268 AL121829.2-201ENST00000620908 328 ntBASIC13.9□□□□□ -0.18
TRAV4A0A0B4J268 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRAV4A0A0B4J268 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC13.9□□□□□ -0.18
TRAV4A0A0B4J268 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC13.9□□□□□ -0.18
TRAV4A0A0B4J268 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
TRAV4A0A0B4J268 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRAV4A0A0B4J268 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC13.9□□□□□ -0.18
TRAV4A0A0B4J268 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC13.9□□□□□ -0.18
TRAV4A0A0B4J268 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRAV4A0A0B4J268 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC13.9□□□□□ -0.18
TRAV4A0A0B4J268 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
TRAV4A0A0B4J268 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRAV4A0A0B4J268 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
TRAV4A0A0B4J268 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
TRAV4A0A0B4J268 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRAV4A0A0B4J268 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRAV4A0A0B4J268 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRAV4A0A0B4J268 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRAV4A0A0B4J268 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
TRAV4A0A0B4J268 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRAV4A0A0B4J268 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC13.9□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 50.4 ms