Protein–RNA interactions for Protein: Q9BYR3

KRTAP4-4, Keratin-associated protein 4-4, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-4Q9BYR3 RN7SL711P-201ENST00000579731 299 ntBASIC1.75□□□□□ -2.13
KRTAP4-4Q9BYR3 AC005323.1-202ENST00000581947 578 ntTSL 4 BASIC1.75□□□□□ -2.13
KRTAP4-4Q9BYR3 BOD1P1-201ENST00000584421 436 ntBASIC1.75□□□□□ -2.13
KRTAP4-4Q9BYR3 AC022916.4-201ENST00000585646 475 ntTSL 3 BASIC1.75□□□□□ -2.13
KRTAP4-4Q9BYR3 AC011444.4-201ENST00000586415 418 ntBASIC1.75□□□□□ -2.13
KRTAP4-4Q9BYR3 AL365214.3-204ENST00000587816 894 ntAPPRIS P5 TSL 5 BASIC1.75□□□□□ -2.13
KRTAP4-4Q9BYR3 RPIAP1-201ENST00000587900 742 ntBASIC1.75□□□□□ -2.13
KRTAP4-4Q9BYR3 FAM95B1-210ENST00000591605 743 ntTSL 5 BASIC1.75□□□□□ -2.13
KRTAP4-4Q9BYR3 LINC00649-209ENST00000597626 612 ntTSL 5 BASIC1.75□□□□□ -2.13
KRTAP4-4Q9BYR3 DPPA5P1-201ENST00000600430 340 ntBASIC1.75□□□□□ -2.13
KRTAP4-4Q9BYR3 CYP2A7P2-201ENST00000600605 641 ntBASIC1.75□□□□□ -2.13
KRTAP4-4Q9BYR3 AC019322.2-201ENST00000605634 147 ntBASIC1.75□□□□□ -2.13
KRTAP4-4Q9BYR3 Metazoa_SRP.46-201ENST00000611137 251 ntBASIC1.75□□□□□ -2.13
KRTAP4-4Q9BYR3 7SK.12-201ENST00000612820 244 ntBASIC1.75□□□□□ -2.13
KRTAP4-4Q9BYR3 Metazoa_SRP.61-201ENST00000613464 315 ntBASIC1.75□□□□□ -2.13
KRTAP4-4Q9BYR3 MIR6777-201ENST00000613934 66 ntBASIC1.75□□□□□ -2.13
KRTAP4-4Q9BYR3 AC244472.5-201ENST00000619103 344 ntAPPRIS P1 BASIC1.75□□□□□ -2.13
KRTAP4-4Q9BYR3 HIST1H2BM-201ENST00000621112 381 ntAPPRIS P1 BASIC1.75□□□□□ -2.13
KRTAP4-4Q9BYR3 AP000769.3-201ENST00000622944 536 ntTSL 3 BASIC1.75□□□□□ -2.13
KRTAP4-4Q9BYR3 C20orf78-202ENST00000623418 606 ntTSL 2 BASIC1.75□□□□□ -2.13
KRTAP4-4Q9BYR3 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC1.75□□□□□ -2.13
KRTAP4-4Q9BYR3 LINC01002-237ENST00000634025 555 ntTSL 5 BASIC1.75□□□□□ -2.13
KRTAP4-4Q9BYR3 AD000090.1-201ENST00000638356 494 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
KRTAP4-4Q9BYR3 AC124944.3-204ENST00000641191 150 ntBASIC1.75□□□□□ -2.13
KRTAP4-4Q9BYR3 PLG-202ENST00000308192 2741 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
KRTAP4-4Q9BYR3 MAGED1-204ENST00000375772 2701 ntAPPRIS P1 TSL 5 BASIC1.75□□□□□ -2.13
KRTAP4-4Q9BYR3 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
KRTAP4-4Q9BYR3 IFT80-225ENST00000496589 3073 ntTSL 2 BASIC1.75□□□□□ -2.13
KRTAP4-4Q9BYR3 NRCAM-204ENST00000379028 6685 ntAPPRIS ALT2 TSL 5 BASIC1.75□□□□□ -2.13
KRTAP4-4Q9BYR3 DIAPH3-201ENST00000267215 3449 ntAPPRIS ALT2 TSL 1 (best) BASIC1.75□□□□□ -2.13
KRTAP4-4Q9BYR3 DIAPH3-204ENST00000400320 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC1.75□□□□□ -2.13
KRTAP4-4Q9BYR3 GUCY1B2-204ENST00000531898 1979 ntBASIC1.75□□□□□ -2.13
KRTAP4-4Q9BYR3 FGFR1OP-202ENST00000366847 14166 ntAPPRIS P4 TSL 1 (best) BASIC1.75□□□□□ -2.13
KRTAP4-4Q9BYR3 NUTM1-203ENST00000537011 4102 ntAPPRIS ALT2 TSL 2 BASIC1.75□□□□□ -2.13
KRTAP4-4Q9BYR3 FGF11-203ENST00000575082 2315 ntTSL 2 BASIC1.75□□□□□ -2.13
KRTAP4-4Q9BYR3 CD28-201ENST00000324106 4812 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
KRTAP4-4Q9BYR3 LINC00858-201ENST00000415469 2685 ntTSL 2 BASIC1.75□□□□□ -2.13
KRTAP4-4Q9BYR3 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC1.75□□□□□ -2.13
KRTAP4-4Q9BYR3 GTF2E1-201ENST00000283875 3012 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
KRTAP4-4Q9BYR3 EFTUD2-201ENST00000402521 3045 ntTSL 2 BASIC1.75□□□□□ -2.13
KRTAP4-4Q9BYR3 PREPL-204ENST00000409272 3030 ntAPPRIS P1 TSL 2 BASIC1.75□□□□□ -2.13
KRTAP4-4Q9BYR3 CFAP57-204ENST00000528956 3037 ntTSL 2 BASIC1.75□□□□□ -2.13
KRTAP4-4Q9BYR3 OR10K2-202ENST00000641042 3023 ntAPPRIS P1 BASIC1.75□□□□□ -2.13
KRTAP4-4Q9BYR3 HMGCR-209ENST00000511206 3395 ntAPPRIS P1 TSL 2 BASIC1.75□□□□□ -2.13
KRTAP4-4Q9BYR3 SLC12A6-203ENST00000397702 4096 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
KRTAP4-4Q9BYR3 ARHGEF9-234ENST00000637557 4775 ntTSL 5 BASIC1.75□□□□□ -2.13
KRTAP4-4Q9BYR3 GON4L-202ENST00000361040 5118 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
KRTAP4-4Q9BYR3 CTNND1-207ENST00000426142 5800 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
KRTAP4-4Q9BYR3 TIMELESS-201ENST00000229201 4376 ntAPPRIS ALT2 TSL 5 BASIC1.75□□□□□ -2.13
KRTAP4-4Q9BYR3 LINC01936-201ENST00000421976 2952 ntTSL 4 BASIC1.75□□□□□ -2.13
KRTAP4-4Q9BYR3 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
KRTAP4-4Q9BYR3 AP005058.1-201ENST00000580193 2975 ntBASIC1.75□□□□□ -2.13
KRTAP4-4Q9BYR3 CTNND1-220ENST00000529526 6099 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
KRTAP4-4Q9BYR3 AL022323.3-201ENST00000623888 5388 ntBASIC1.75□□□□□ -2.13
KRTAP4-4Q9BYR3 CCDC88A-202ENST00000336838 9505 ntAPPRIS ALT2 TSL 1 (best) BASIC1.75□□□□□ -2.13
KRTAP4-4Q9BYR3 IL16-201ENST00000302987 3999 ntAPPRIS P3 TSL 1 (best) BASIC1.75□□□□□ -2.13
KRTAP4-4Q9BYR3 MCFD2-207ENST00000409913 3975 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
KRTAP4-4Q9BYR3 LINC00837-201ENST00000443246 3991 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
KRTAP4-4Q9BYR3 GPR155-203ENST00000392552 6730 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
KRTAP4-4Q9BYR3 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC1.75□□□□□ -2.13
KRTAP4-4Q9BYR3 BCL9P1-201ENST00000506012 2561 ntBASIC1.75□□□□□ -2.13
KRTAP4-4Q9BYR3 PIEZO2-202ENST00000383408 9718 ntAPPRIS ALT2 TSL 5 BASIC1.75□□□□□ -2.13
KRTAP4-4Q9BYR3 EIF3D-203ENST00000405442 1851 ntAPPRIS P1 TSL 5 BASIC1.75□□□□□ -2.13
KRTAP4-4Q9BYR3 VPS53-204ENST00000437048 13106 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
KRTAP4-4Q9BYR3 FGF5-201ENST00000312465 4555 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
KRTAP4-4Q9BYR3 ZNF791-201ENST00000343325 4554 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
KRTAP4-4Q9BYR3 TMX2-202ENST00000378312 1521 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
KRTAP4-4Q9BYR3 PTCHD4-201ENST00000339488 2850 ntAPPRIS P1 TSL 2 BASIC1.75□□□□□ -2.13
KRTAP4-4Q9BYR3 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC1.75□□□□□ -2.13
KRTAP4-4Q9BYR3 TGFB3-201ENST00000238682 2522 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
KRTAP4-4Q9BYR3 UBE2V1-201ENST00000340309 2536 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
KRTAP4-4Q9BYR3 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
KRTAP4-4Q9BYR3 SLC38A2-201ENST00000256689 4888 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
KRTAP4-4Q9BYR3 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC1.75□□□□□ -2.13
KRTAP4-4Q9BYR3 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
KRTAP4-4Q9BYR3 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC1.75□□□□□ -2.13
KRTAP4-4Q9BYR3 SND1-201ENST00000354725 3476 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
KRTAP4-4Q9BYR3 XPO1-203ENST00000406957 3479 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
KRTAP4-4Q9BYR3 MCM8-204ENST00000378896 3769 ntAPPRIS P4 TSL 1 (best) BASIC1.75□□□□□ -2.13
KRTAP4-4Q9BYR3 C9orf43-201ENST00000288462 2130 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
KRTAP4-4Q9BYR3 ADAM1A-201ENST00000424240 2129 ntBASIC1.75□□□□□ -2.13
KRTAP4-4Q9BYR3 GRIA1-208ENST00000518142 2761 ntTSL 2 BASIC1.75□□□□□ -2.13
KRTAP4-4Q9BYR3 TBC1D8B-206ENST00000481617 4098 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
KRTAP4-4Q9BYR3 PUM1-204ENST00000373747 5375 ntAPPRIS ALT1 TSL 5 BASIC1.75□□□□□ -2.13
KRTAP4-4Q9BYR3 AP1G1-201ENST00000299980 6969 ntAPPRIS P3 TSL 1 (best) BASIC1.75□□□□□ -2.13
KRTAP4-4Q9BYR3 NHSL2-202ENST00000510661 3082 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
KRTAP4-4Q9BYR3 EYA4-208ENST00000452339 2411 ntTSL 2 BASIC1.75□□□□□ -2.13
KRTAP4-4Q9BYR3 NELL1-211ENST00000532434 2400 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
KRTAP4-4Q9BYR3 RNF38-206ENST00000377885 4985 ntAPPRIS P1 TSL 5 BASIC1.75□□□□□ -2.13
KRTAP4-4Q9BYR3 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC1.75□□□□□ -2.13
KRTAP4-4Q9BYR3 VPS11-207ENST00000620429 2739 ntTSL 5 BASIC1.75□□□□□ -2.13
KRTAP4-4Q9BYR3 NTRK3-220ENST00000626019 2741 ntTSL 5 BASIC1.75□□□□□ -2.13
KRTAP4-4Q9BYR3 ZNF185-212ENST00000539731 4334 ntAPPRIS ALT2 TSL 5 BASIC1.75□□□□□ -2.13
KRTAP4-4Q9BYR3 CALML4-208ENST00000540479 4603 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
KRTAP4-4Q9BYR3 ZNF790-201ENST00000356725 3037 ntAPPRIS P1 TSL 2 BASIC1.74□□□□□ -2.13
KRTAP4-4Q9BYR3 VN1R1-201ENST00000321039 2353 ntAPPRIS P1 BASIC1.74□□□□□ -2.13
KRTAP4-4Q9BYR3 GSG1-201ENST00000337630 2390 ntAPPRIS P3 TSL 1 (best) BASIC1.74□□□□□ -2.13
KRTAP4-4Q9BYR3 KRT18P59-202ENST00000534728 3338 ntTSL 2 BASIC1.74□□□□□ -2.13
KRTAP4-4Q9BYR3 UTY-209ENST00000537580 6490 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
KRTAP4-4Q9BYR3 MGAM-209ENST00000620571 6483 ntTSL 5 BASIC1.74□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 135.6 ms