Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 NHLRC2-201ENST00000369301 11051 ntAPPRIS P1 TSL 2 BASIC2.62□□□□□ -1.99
VPS13CQ709C8 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC2.62□□□□□ -1.99
VPS13CQ709C8 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC2.62□□□□□ -1.99
VPS13CQ709C8 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
VPS13CQ709C8 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC2.62□□□□□ -1.99
VPS13CQ709C8 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC2.62□□□□□ -1.99
VPS13CQ709C8 AC239809.1-201ENST00000450470 217 ntBASIC2.62□□□□□ -1.99
VPS13CQ709C8 AL136097.1-201ENST00000456945 913 ntBASIC2.62□□□□□ -1.99
VPS13CQ709C8 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC2.62□□□□□ -1.99
VPS13CQ709C8 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC2.62□□□□□ -1.99
VPS13CQ709C8 EIF1P6-201ENST00000600054 334 ntBASIC2.62□□□□□ -1.99
VPS13CQ709C8 MEG8-222ENST00000637332 1237 ntTSL 5 BASIC2.62□□□□□ -1.99
VPS13CQ709C8 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
VPS13CQ709C8 NEGR1-202ENST00000357731 12811 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
VPS13CQ709C8 MTND5P24-201ENST00000438892 1767 ntBASIC2.62□□□□□ -1.99
VPS13CQ709C8 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC2.62□□□□□ -1.99
VPS13CQ709C8 KCNMB2-210ENST00000617329 2214 ntTSL 2 BASIC2.62□□□□□ -1.99
VPS13CQ709C8 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC2.62□□□□□ -1.99
VPS13CQ709C8 CNTN3-201ENST00000263665 4948 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
VPS13CQ709C8 SLC38A9-218ENST00000512595 1756 ntTSL 2 BASIC2.62□□□□□ -1.99
VPS13CQ709C8 RSL24D1P4-201ENST00000400938 484 ntBASIC2.62□□□□□ -1.99
VPS13CQ709C8 AL035404.1-201ENST00000497982 568 ntBASIC2.62□□□□□ -1.99
VPS13CQ709C8 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC2.62□□□□□ -1.99
VPS13CQ709C8 LINC02505-203ENST00000515128 756 ntTSL 5 BASIC2.62□□□□□ -1.99
VPS13CQ709C8 AC026801.2-201ENST00000515352 425 ntBASIC2.62□□□□□ -1.99
VPS13CQ709C8 LINC02170-201ENST00000561519 555 ntTSL 4 BASIC2.62□□□□□ -1.99
VPS13CQ709C8 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
VPS13CQ709C8 EXPH5-203ENST00000525344 6542 ntAPPRIS ALT2 TSL 1 (best) BASIC2.62□□□□□ -1.99
VPS13CQ709C8 AL022322.2-201ENST00000624072 20397 ntBASIC2.62□□□□□ -1.99
VPS13CQ709C8 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC2.62□□□□□ -1.99
VPS13CQ709C8 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC2.61□□□□□ -1.99
VPS13CQ709C8 AL512641.1-201ENST00000427232 548 ntTSL 3 BASIC2.61□□□□□ -1.99
VPS13CQ709C8 RPL23AP82-202ENST00000427528 469 ntBASIC2.61□□□□□ -1.99
VPS13CQ709C8 RPL7P12-201ENST00000446719 750 ntBASIC2.61□□□□□ -1.99
VPS13CQ709C8 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC2.61□□□□□ -1.99
VPS13CQ709C8 CENPBD1P1-201ENST00000464061 469 ntBASIC2.61□□□□□ -1.99
VPS13CQ709C8 AC126389.1-201ENST00000477436 290 ntBASIC2.61□□□□□ -1.99
VPS13CQ709C8 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC2.61□□□□□ -1.99
VPS13CQ709C8 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC2.61□□□□□ -1.99
VPS13CQ709C8 AC064859.1-201ENST00000624741 174 ntBASIC2.61□□□□□ -1.99
VPS13CQ709C8 BRWD3-201ENST00000373275 11381 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
VPS13CQ709C8 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC2.61□□□□□ -1.99
VPS13CQ709C8 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC2.61□□□□□ -1.99
VPS13CQ709C8 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC2.61□□□□□ -1.99
VPS13CQ709C8 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
VPS13CQ709C8 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
VPS13CQ709C8 OR51C1P-202ENST00000641159 1444 ntBASIC2.61□□□□□ -1.99
VPS13CQ709C8 SNORA71.1-201ENST00000364523 117 ntBASIC2.61□□□□□ -1.99
VPS13CQ709C8 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC2.61□□□□□ -1.99
VPS13CQ709C8 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC2.61□□□□□ -1.99
VPS13CQ709C8 RN7SKP116-201ENST00000516902 319 ntBASIC2.61□□□□□ -1.99
VPS13CQ709C8 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC2.61□□□□□ -1.99
VPS13CQ709C8 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC2.61□□□□□ -1.99
VPS13CQ709C8 AC022509.4-201ENST00000621404 572 ntBASIC2.61□□□□□ -1.99
VPS13CQ709C8 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC2.61□□□□□ -1.99
VPS13CQ709C8 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC2.61□□□□□ -1.99
VPS13CQ709C8 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
VPS13CQ709C8 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC2.61□□□□□ -1.99
VPS13CQ709C8 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC2.61□□□□□ -1.99
VPS13CQ709C8 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
VPS13CQ709C8 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
VPS13CQ709C8 AL513477.1-202ENST00000417061 214 ntBASIC2.61□□□□□ -1.99
VPS13CQ709C8 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC2.61□□□□□ -1.99
VPS13CQ709C8 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC2.61□□□□□ -1.99
VPS13CQ709C8 AC019227.1-201ENST00000526902 510 ntBASIC2.61□□□□□ -1.99
VPS13CQ709C8 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC2.61□□□□□ -1.99
VPS13CQ709C8 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
VPS13CQ709C8 Z95114.1-201ENST00000624264 14574 ntBASIC2.61□□□□□ -1.99
VPS13CQ709C8 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
VPS13CQ709C8 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC2.6□□□□□ -1.99
VPS13CQ709C8 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC2.6□□□□□ -1.99
VPS13CQ709C8 HMGB3P22-202ENST00000451823 572 ntBASIC2.6□□□□□ -1.99
VPS13CQ709C8 APOOP4-201ENST00000513530 597 ntBASIC2.6□□□□□ -1.99
VPS13CQ709C8 AL121766.1-201ENST00000547436 487 ntBASIC2.6□□□□□ -1.99
VPS13CQ709C8 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC2.6□□□□□ -1.99
VPS13CQ709C8 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC2.6□□□□□ -1.99
VPS13CQ709C8 AC004014.2-201ENST00000623718 5122 ntBASIC2.6□□□□□ -1.99
VPS13CQ709C8 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
VPS13CQ709C8 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC2.6□□□□□ -1.99
VPS13CQ709C8 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
VPS13CQ709C8 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
VPS13CQ709C8 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
VPS13CQ709C8 CLCN3-211ENST00000613795 5874 ntTSL 5 BASIC2.6□□□□□ -1.99
VPS13CQ709C8 TRIP11-201ENST00000267622 9996 ntAPPRIS P2 TSL 1 (best) BASIC2.6□□□□□ -1.99
VPS13CQ709C8 LINC02471-203ENST00000641941 4752 ntBASIC2.6□□□□□ -1.99
VPS13CQ709C8 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC2.6□□□□□ -1.99
VPS13CQ709C8 AC083843.3-201ENST00000623679 2186 ntBASIC2.6□□□□□ -1.99
VPS13CQ709C8 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC2.6□□□□□ -1.99
VPS13CQ709C8 PALLD-201ENST00000261509 5809 ntAPPRIS P3 TSL 1 (best) BASIC2.6□□□□□ -1.99
VPS13CQ709C8 BCORP1-203ENST00000513194 5093 ntBASIC2.6□□□□□ -1.99
VPS13CQ709C8 AL356057.1-202ENST00000402263 756 ntBASIC2.6□□□□□ -1.99
VPS13CQ709C8 AL391417.1-201ENST00000404100 426 ntBASIC2.6□□□□□ -1.99
VPS13CQ709C8 AL353678.1-201ENST00000422735 741 ntBASIC2.6□□□□□ -1.99
VPS13CQ709C8 LINC00266-4P-201ENST00000427373 842 ntTSL 3 BASIC2.6□□□□□ -1.99
VPS13CQ709C8 RN7SL20P-201ENST00000488827 297 ntBASIC2.6□□□□□ -1.99
VPS13CQ709C8 LINC01192-206ENST00000489012 818 ntTSL 5 BASIC2.6□□□□□ -1.99
VPS13CQ709C8 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC2.6□□□□□ -1.99
VPS13CQ709C8 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC2.6□□□□□ -1.99
VPS13CQ709C8 ATP1B3P1-201ENST00000605365 821 ntBASIC2.6□□□□□ -1.99
VPS13CQ709C8 OR7C1-204ENST00000642000 11290 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 91.3 ms