Protein–RNA interactions for Protein: Q13698

CACNA1S, Voltage-dependent L-type calcium channel subunit alpha-1S, humanhuman

Predictions only

Length 1,873 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1SQ13698 KC877373.1-201ENST00000479066 408 ntBASIC4.16□□□□□ -1.74
CACNA1SQ13698 PDLIM1P4-201ENST00000504327 1006 ntBASIC4.16□□□□□ -1.74
CACNA1SQ13698 NCAPGP1-201ENST00000505112 1814 ntBASIC4.16□□□□□ -1.74
CACNA1SQ13698 AL121603.1-201ENST00000553815 142 ntBASIC4.16□□□□□ -1.74
CACNA1SQ13698 DPRXP4-201ENST00000578053 568 ntBASIC4.16□□□□□ -1.74
CACNA1SQ13698 AC006946.3-201ENST00000609791 756 ntBASIC4.16□□□□□ -1.74
CACNA1SQ13698 BMS1P21-201ENST00000634565 365 ntBASIC4.16□□□□□ -1.74
CACNA1SQ13698 SUPT3H-202ENST00000371459 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC4.16□□□□□ -1.74
CACNA1SQ13698 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC4.16□□□□□ -1.74
CACNA1SQ13698 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC4.16□□□□□ -1.74
CACNA1SQ13698 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
CACNA1SQ13698 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.74
CACNA1SQ13698 AC062016.1-201ENST00000355719 319 ntBASIC4.15□□□□□ -1.74
CACNA1SQ13698 NACA3P-201ENST00000359690 648 ntBASIC4.15□□□□□ -1.74
CACNA1SQ13698 MIR137-201ENST00000385223 102 ntBASIC4.15□□□□□ -1.74
CACNA1SQ13698 AC004552.1-201ENST00000419089 348 ntBASIC4.15□□□□□ -1.74
CACNA1SQ13698 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC4.15□□□□□ -1.74
CACNA1SQ13698 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC4.15□□□□□ -1.74
CACNA1SQ13698 RPS26P3-201ENST00000470205 348 ntBASIC4.15□□□□□ -1.74
CACNA1SQ13698 AC090543.2-201ENST00000483963 348 ntBASIC4.15□□□□□ -1.74
CACNA1SQ13698 AC004057.1-201ENST00000485827 348 ntBASIC4.15□□□□□ -1.74
CACNA1SQ13698 AC093732.2-201ENST00000607950 274 ntBASIC4.15□□□□□ -1.74
CACNA1SQ13698 AC103858.2-201ENST00000621471 543 ntBASIC4.15□□□□□ -1.74
CACNA1SQ13698 AL359715.5-201ENST00000623431 443 ntBASIC4.15□□□□□ -1.74
CACNA1SQ13698 DDX18P3-201ENST00000404856 2007 ntBASIC4.15□□□□□ -1.74
CACNA1SQ13698 CR381670.1-201ENST00000624291 1693 ntBASIC4.15□□□□□ -1.74
CACNA1SQ13698 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC4.15□□□□□ -1.74
CACNA1SQ13698 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC4.15□□□□□ -1.75
CACNA1SQ13698 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.75
CACNA1SQ13698 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC4.15□□□□□ -1.75
CACNA1SQ13698 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC4.15□□□□□ -1.75
CACNA1SQ13698 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC4.15□□□□□ -1.75
CACNA1SQ13698 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC4.15□□□□□ -1.75
CACNA1SQ13698 RNU6-283P-201ENST00000364788 107 ntBASIC4.15□□□□□ -1.75
CACNA1SQ13698 LINC01661-201ENST00000415910 708 ntTSL 3 BASIC4.15□□□□□ -1.75
CACNA1SQ13698 BACH1-IT3-201ENST00000429843 406 ntTSL 2 BASIC4.15□□□□□ -1.75
CACNA1SQ13698 MTND2P25-201ENST00000449028 610 ntBASIC4.15□□□□□ -1.75
CACNA1SQ13698 ANP32BP2-201ENST00000454525 545 ntBASIC4.15□□□□□ -1.75
CACNA1SQ13698 SYT14P1-201ENST00000481459 721 ntBASIC4.15□□□□□ -1.75
CACNA1SQ13698 AC021678.1-201ENST00000505195 936 ntBASIC4.15□□□□□ -1.75
CACNA1SQ13698 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC4.15□□□□□ -1.75
CACNA1SQ13698 AL121576.1-201ENST00000556055 276 ntBASIC4.15□□□□□ -1.75
CACNA1SQ13698 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC4.15□□□□□ -1.75
CACNA1SQ13698 AC008543.4-201ENST00000585694 442 ntTSL 2 BASIC4.15□□□□□ -1.75
CACNA1SQ13698 AC015802.5-201ENST00000607478 399 ntBASIC4.15□□□□□ -1.75
CACNA1SQ13698 RNVU1-4-201ENST00000612985 164 ntBASIC4.15□□□□□ -1.75
CACNA1SQ13698 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC4.15□□□□□ -1.75
CACNA1SQ13698 Z83843.1-201ENST00000604070 3685 ntBASIC4.15□□□□□ -1.75
CACNA1SQ13698 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
CACNA1SQ13698 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC4.15□□□□□ -1.75
CACNA1SQ13698 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC4.15□□□□□ -1.75
CACNA1SQ13698 HSPA8P17-201ENST00000427029 1382 ntBASIC4.14□□□□□ -1.75
CACNA1SQ13698 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
CACNA1SQ13698 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
CACNA1SQ13698 EEF1A1P41-201ENST00000414667 207 ntBASIC4.14□□□□□ -1.75
CACNA1SQ13698 RPS26P47-201ENST00000427219 348 ntBASIC4.14□□□□□ -1.75
CACNA1SQ13698 AC011242.1-201ENST00000433596 1158 ntBASIC4.14□□□□□ -1.75
CACNA1SQ13698 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC4.14□□□□□ -1.75
CACNA1SQ13698 TEX41-209ENST00000451478 452 ntTSL 2 BASIC4.14□□□□□ -1.75
CACNA1SQ13698 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC4.14□□□□□ -1.75
CACNA1SQ13698 AC005229.2-201ENST00000456995 399 ntBASIC4.14□□□□□ -1.75
CACNA1SQ13698 AL121766.1-201ENST00000547436 487 ntBASIC4.14□□□□□ -1.75
CACNA1SQ13698 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC4.14□□□□□ -1.75
CACNA1SQ13698 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC4.14□□□□□ -1.75
CACNA1SQ13698 AC020914.4-201ENST00000597690 277 ntBASIC4.14□□□□□ -1.75
CACNA1SQ13698 AC006023.1-201ENST00000603944 259 ntBASIC4.14□□□□□ -1.75
CACNA1SQ13698 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
CACNA1SQ13698 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
CACNA1SQ13698 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC4.14□□□□□ -1.75
CACNA1SQ13698 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC4.13□□□□□ -1.75
CACNA1SQ13698 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC4.13□□□□□ -1.75
CACNA1SQ13698 AL158071.1-201ENST00000430315 461 ntBASIC4.13□□□□□ -1.75
CACNA1SQ13698 AL139132.1-201ENST00000431587 344 ntBASIC4.13□□□□□ -1.75
CACNA1SQ13698 AC084149.2-201ENST00000438443 797 ntTSL 5 BASIC4.13□□□□□ -1.75
CACNA1SQ13698 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC4.13□□□□□ -1.75
CACNA1SQ13698 RPS29P31-201ENST00000446147 164 ntBASIC4.13□□□□□ -1.75
CACNA1SQ13698 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC4.13□□□□□ -1.75
CACNA1SQ13698 RPS6P2-201ENST00000454208 705 ntBASIC4.13□□□□□ -1.75
CACNA1SQ13698 RPL27AP5-201ENST00000469428 449 ntBASIC4.13□□□□□ -1.75
CACNA1SQ13698 KBTBD3-204ENST00000531482 874 ntTSL 3 BASIC4.13□□□□□ -1.75
CACNA1SQ13698 AC087888.1-201ENST00000550884 1254 ntBASIC4.13□□□□□ -1.75
CACNA1SQ13698 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
CACNA1SQ13698 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
CACNA1SQ13698 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
CACNA1SQ13698 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
CACNA1SQ13698 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC4.13□□□□□ -1.75
CACNA1SQ13698 SCN1A-220ENST00000641603 12506 ntBASIC4.13□□□□□ -1.75
CACNA1SQ13698 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
CACNA1SQ13698 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC4.13□□□□□ -1.75
CACNA1SQ13698 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC4.13□□□□□ -1.75
CACNA1SQ13698 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC4.13□□□□□ -1.75
CACNA1SQ13698 RPL7P28-201ENST00000437739 740 ntBASIC4.13□□□□□ -1.75
CACNA1SQ13698 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC4.13□□□□□ -1.75
CACNA1SQ13698 HMGB1P16-201ENST00000447155 540 ntBASIC4.13□□□□□ -1.75
CACNA1SQ13698 SEC22A-207ENST00000481965 673 ntTSL 3 BASIC4.13□□□□□ -1.75
CACNA1SQ13698 AC091826.1-201ENST00000514065 313 ntBASIC4.13□□□□□ -1.75
CACNA1SQ13698 LINC00535-204ENST00000520513 305 ntTSL 3 BASIC4.13□□□□□ -1.75
CACNA1SQ13698 AC022882.1-201ENST00000532142 501 ntBASIC4.13□□□□□ -1.75
CACNA1SQ13698 DUXAP6-201ENST00000553858 601 ntBASIC4.13□□□□□ -1.75
CACNA1SQ13698 AC092868.3-201ENST00000560515 784 ntBASIC4.13□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 103.9 ms