RNA–Protein interactions for RNA: ENST00000415910.2

LINC01661-201, Transcript of long intergenic non-protein coding RNA 1661, humanhuman

TSL 3 BASIC

Gene LINC01661, Length 708 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01661-201ENST00000415910 AEBP2Q6ZN18 517 aaPredicted RBP23.58■■□□□ 1.37
LINC01661-201ENST00000415910 CHIC1Q5VXU3 224 aa23.14■■□□□ 1.29
LINC01661-201ENST00000415910 PHF23Q9BUL5 403 aaPredicted RBP20.33■□□□□ 0.85
LINC01661-201ENST00000415910 SENP3Q9H4L4 574 aaPredicted RBP20.07■□□□□ 0.8
LINC01661-201ENST00000415910 PLPPR3Q6T4P5 718 aa18.87■□□□□ 0.61
LINC01661-201ENST00000415910 FOXD1Q16676 465 aa18.57■□□□□ 0.56
LINC01661-201ENST00000415910 ADRA2BP18089 450 aa17.93■□□□□ 0.46
LINC01661-201ENST00000415910 PPP6R1Q9UPN7 881 aa17.92■□□□□ 0.46
LINC01661-201ENST00000415910 PIAS4Q8N2W9 510 aaPredicted RBP17.58■□□□□ 0.4
LINC01661-201ENST00000415910 MSH5O43196 834 aa17.16■□□□□ 0.34
LINC01661-201ENST00000415910 PPP4R3CPQ6ZMV5 832 aa16.62■□□□□ 0.25
LINC01661-201ENST00000415910 SCAF1Q9H7N4 1312 aaKnown RBP16.49■□□□□ 0.23
LINC01661-201ENST00000415910 KCNA4P22459 653 aa16.3■□□□□ 0.2
LINC01661-201ENST00000415910 NCBP3Q53F19 620 aaKnown RBP16.27■□□□□ 0.2
LINC01661-201ENST00000415910 MAPK8IP2Q13387 824 aaPredicted RBP16.24■□□□□ 0.19
LINC01661-201ENST00000415910 CNKSR2Q8WXI2 1034 aa16.15■□□□□ 0.18
LINC01661-201ENST00000415910 POTEDQ86YR6 584 aa16.02■□□□□ 0.16
LINC01661-201ENST00000415910 DMRT2Q9Y5R5 561 aa16.01■□□□□ 0.15
LINC01661-201ENST00000415910 NPM3O75607 178 aaKnown RBP15.95■□□□□ 0.14
LINC01661-201ENST00000415910 RNF216Q9NWF9 866 aaPredicted RBP15.81■□□□□ 0.12
LINC01661-201ENST00000415910 HOXD11P31277 338 aaPredicted RBP15.7■□□□□ 0.1
LINC01661-201ENST00000415910 SLC4A1APQ9BWU0 796 aaKnown RBP15.57■□□□□ 0.08
LINC01661-201ENST00000415910 DNAJC5BQ9UF47 199 aa15.46■□□□□ 0.07
LINC01661-201ENST00000415910 DCAF8L1A6NGE4 600 aa15.38■□□□□ 0.05
LINC01661-201ENST00000415910 EHMT2Q96KQ7 1210 aa15.21■□□□□ 0.03
LINC01661-201ENST00000415910 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.03■□□□□ -0
LINC01661-201ENST00000415910 SLC4A2P04920 1241 aa15.02■□□□□ -0
LINC01661-201ENST00000415910 FOXD4L1Q9NU39 408 aa15.01□□□□□ -0.01
LINC01661-201ENST00000415910 CSRNP3Q8WYN3 585 aa14.97□□□□□ -0.01
LINC01661-201ENST00000415910 ZBTB22O15209 634 aa14.95□□□□□ -0.02
LINC01661-201ENST00000415910 MYCNP04198 464 aaPredicted RBP14.77□□□□□ -0.05
LINC01661-201ENST00000415910 U3KPZ7 1027 aaPredicted RBP14.72□□□□□ -0.05
LINC01661-201ENST00000415910 RNF39Q9H2S5 420 aa14.67□□□□□ -0.06
LINC01661-201ENST00000415910 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.66□□□□□ -0.06
LINC01661-201ENST00000415910 HNRNPUL2Q1KMD3 747 aaKnown RBP14.66□□□□□ -0.06
LINC01661-201ENST00000415910 SAMD1Q6SPF0 538 aaPredicted RBP14.59□□□□□ -0.07
LINC01661-201ENST00000415910 C1QBPQ07021 282 aaKnown RBP14.54□□□□□ -0.08
LINC01661-201ENST00000415910 APLP2Q06481 763 aa14.51□□□□□ -0.09
LINC01661-201ENST00000415910 ATXN8OSP0DMR3 200 aa14.49□□□□□ -0.09
LINC01661-201ENST00000415910 ATF5Q9Y2D1 282 aaPredicted RBP14.3□□□□□ -0.12
LINC01661-201ENST00000415910 CAPN15O75808 1086 aa14.29□□□□□ -0.12
LINC01661-201ENST00000415910 CACNB1Q02641 598 aaPredicted RBP14.29□□□□□ -0.12
LINC01661-201ENST00000415910 SPINK5Q9NQ38 1064 aaPredicted RBP14.29□□□□□ -0.12
LINC01661-201ENST00000415910 ZNF219Q9P2Y4 722 aaPredicted RBP14.25□□□□□ -0.13
LINC01661-201ENST00000415910 TRHP20396 242 aaPredicted RBP14.24□□□□□ -0.13
LINC01661-201ENST00000415910 POLA2Q14181 598 aa14.02□□□□□ -0.17
LINC01661-201ENST00000415910 ABCB7O75027 752 aa13.99□□□□□ -0.17
LINC01661-201ENST00000415910 DSG3P32926 999 aa13.99□□□□□ -0.17
LINC01661-201ENST00000415910 ZBTB12Q9Y330 459 aaPredicted RBP13.82□□□□□ -0.2
LINC01661-201ENST00000415910 FBLN2P98095 1184 aa13.81□□□□□ -0.2
LINC01661-201ENST00000415910 MKRN4PQ13434 485 aaPredicted RBP13.69□□□□□ -0.22
LINC01661-201ENST00000415910 FKBP8Q14318 412 aa13.57□□□□□ -0.24
LINC01661-201ENST00000415910 OSCARQ8IYS5 282 aa13.51□□□□□ -0.25
LINC01661-201ENST00000415910 SPDYE4A6NLX3 237 aa13.49□□□□□ -0.25
LINC01661-201ENST00000415910 SPDYE2BA6NHP3 402 aa13.43□□□□□ -0.26
LINC01661-201ENST00000415910 SPDYE6P0CI01 402 aa13.43□□□□□ -0.26
LINC01661-201ENST00000415910 SPDYE2Q495Y8 402 aa13.43□□□□□ -0.26
LINC01661-201ENST00000415910 ZNF692Q9BU19 519 aaPredicted RBP13.41□□□□□ -0.26
LINC01661-201ENST00000415910 RBM42Q9BTD8 480 aaKnown RBP13.39□□□□□ -0.27
LINC01661-201ENST00000415910 SSUH2Q9Y2M2 353 aa13.29□□□□□ -0.28
LINC01661-201ENST00000415910 AKT1S1Q96B36 256 aa13.22□□□□□ -0.29
LINC01661-201ENST00000415910 PABPN1Q86U42 306 aaKnown RBP eCLIP13.21□□□□□ -0.29
LINC01661-201ENST00000415910 PROM2Q8N271 834 aa13.21□□□□□ -0.29
LINC01661-201ENST00000415910 FBXO3Q9UK99 471 aa13.12□□□□□ -0.31
LINC01661-201ENST00000415910 REM2Q8IYK8 340 aaPredicted RBP13.07□□□□□ -0.32
LINC01661-201ENST00000415910 STAG3Q9UJ98 1225 aa13.05□□□□□ -0.32
LINC01661-201ENST00000415910 SPDYE1Q8NFV5 336 aaPredicted RBP13.03□□□□□ -0.32
LINC01661-201ENST00000415910 CLEC11AQ9Y240 323 aa12.98□□□□□ -0.33
LINC01661-201ENST00000415910 PITPNM1O00562 1244 aa12.9□□□□□ -0.34
LINC01661-201ENST00000415910 PRR29P0C7W0 189 aa12.88□□□□□ -0.35
LINC01661-201ENST00000415910 VASPP50552 380 aaPredicted RBP12.87□□□□□ -0.35
LINC01661-201ENST00000415910 MIER1Q8N108 512 aa12.82□□□□□ -0.36
LINC01661-201ENST00000415910 PLCD3Q8N3E9 789 aa12.81□□□□□ -0.36
LINC01661-201ENST00000415910 PLEKHG5O94827 1062 aa12.8□□□□□ -0.36
LINC01661-201ENST00000415910 CHRDL2Q6WN34 429 aa12.77□□□□□ -0.37
LINC01661-201ENST00000415910 KLHL34Q8N239 644 aa12.71□□□□□ -0.37
LINC01661-201ENST00000415910 IFNLR1Q8IU57 520 aaPredicted RBP12.69□□□□□ -0.38
LINC01661-201ENST00000415910 ZBTB47Q9UFB7 747 aaPredicted RBP12.68□□□□□ -0.38
LINC01661-201ENST00000415910 CREBZFQ9NS37 354 aa12.67□□□□□ -0.38
LINC01661-201ENST00000415910 FXR2P51116 673 aaKnown RBP eCLIP12.65□□□□□ -0.38
LINC01661-201ENST00000415910 PRKAR2AP13861 404 aaKnown RBP12.61□□□□□ -0.39
LINC01661-201ENST00000415910 CHADLQ6NUI6 762 aa12.6□□□□□ -0.39
LINC01661-201ENST00000415910 PIP4P2Q8N4L2 257 aa12.6□□□□□ -0.39
LINC01661-201ENST00000415910 SPOCK2Q92563 424 aa12.57□□□□□ -0.4
LINC01661-201ENST00000415910 NPM1P06748 294 aaKnown RBP eCLIP12.54□□□□□ -0.4
LINC01661-201ENST00000415910 AMER1Q5JTC6 1135 aaPredicted RBP12.52□□□□□ -0.41
LINC01661-201ENST00000415910 MNX1P50219 401 aaPredicted RBP12.51□□□□□ -0.41
LINC01661-201ENST00000415910 FARP1Q9Y4F1 1045 aaPredicted RBP12.51□□□□□ -0.41
LINC01661-201ENST00000415910 POTEHQ6S545 545 aa12.48□□□□□ -0.41
LINC01661-201ENST00000415910 RTN4Q9NQC3 1192 aaKnown RBP12.43□□□□□ -0.42
LINC01661-201ENST00000415910 NUBP1P53384 320 aa12.41□□□□□ -0.42
LINC01661-201ENST00000415910 CIZ1Q9ULV3 898 aaPredicted RBP12.38□□□□□ -0.43
LINC01661-201ENST00000415910 DCAF8Q5TAQ9 597 aa12.37□□□□□ -0.43
LINC01661-201ENST00000415910 FAM212AQ96EL1 285 aa12.37□□□□□ -0.43
LINC01661-201ENST00000415910 GSE1Q14687 1217 aa12.36□□□□□ -0.43
LINC01661-201ENST00000415910 RASEFQ8IZ41 740 aa12.34□□□□□ -0.43
LINC01661-201ENST00000415910 SLC24A1O60721 1099 aa12.31□□□□□ -0.44
LINC01661-201ENST00000415910 PAK3O75914 559 aaPredicted RBP12.31□□□□□ -0.44
LINC01661-201ENST00000415910 TSPYL2Q9H2G4 693 aaPredicted RBP12.3□□□□□ -0.44
LINC01661-201ENST00000415910 PKD2Q13563 968 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms