Protein–RNA interactions for Protein: Q06546

GABPA, GA-binding protein alpha chain, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABPAQ06546 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC4.36□□□□□ -1.71
GABPAQ06546 RNU6-1218P-201ENST00000458990 108 ntBASIC4.36□□□□□ -1.71
GABPAQ06546 RPL23AP12-201ENST00000467573 473 ntBASIC4.36□□□□□ -1.71
GABPAQ06546 LINC01612-201ENST00000504509 469 ntTSL 3 BASIC4.36□□□□□ -1.71
GABPAQ06546 AC110768.1-201ENST00000509222 400 ntBASIC4.36□□□□□ -1.71
GABPAQ06546 HMGB3P13-201ENST00000511263 607 ntBASIC4.36□□□□□ -1.71
GABPAQ06546 RN7SKP13-201ENST00000515933 244 ntBASIC4.36□□□□□ -1.71
GABPAQ06546 LINC01603-201ENST00000517343 1134 ntTSL 2 BASIC4.36□□□□□ -1.71
GABPAQ06546 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC4.36□□□□□ -1.71
GABPAQ06546 SOD1P3-201ENST00000518682 454 ntBASIC4.36□□□□□ -1.71
GABPAQ06546 AC025524.2-211ENST00000519990 1173 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
GABPAQ06546 TSPAN19-204ENST00000532498 998 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
GABPAQ06546 LINC02375-201ENST00000545739 852 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
GABPAQ06546 AC006960.3-201ENST00000561845 705 ntBASIC4.36□□□□□ -1.71
GABPAQ06546 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC4.36□□□□□ -1.71
GABPAQ06546 STARD13-AS-208ENST00000589472 859 ntTSL 5 BASIC4.36□□□□□ -1.71
GABPAQ06546 PSMA6P4-201ENST00000603247 718 ntBASIC4.36□□□□□ -1.71
GABPAQ06546 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC4.36□□□□□ -1.71
GABPAQ06546 DLEU1_1.1-201ENST00000618107 190 ntBASIC4.36□□□□□ -1.71
GABPAQ06546 AC015967.1-201ENST00000619893 476 ntBASIC4.36□□□□□ -1.71
GABPAQ06546 BMS1P21-201ENST00000634565 365 ntBASIC4.36□□□□□ -1.71
GABPAQ06546 U6.105-201ENST00000637379 88 ntBASIC4.36□□□□□ -1.71
GABPAQ06546 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
GABPAQ06546 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
GABPAQ06546 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC4.36□□□□□ -1.71
GABPAQ06546 AC007823.1-201ENST00000569932 1566 ntBASIC4.36□□□□□ -1.71
GABPAQ06546 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC4.35□□□□□ -1.71
GABPAQ06546 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC4.35□□□□□ -1.71
GABPAQ06546 OR4F6-201ENST00000328882 1238 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
GABPAQ06546 SNORD9-201ENST00000362566 104 ntBASIC4.35□□□□□ -1.71
GABPAQ06546 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
GABPAQ06546 CRYBB2P1-203ENST00000415709 538 ntBASIC4.35□□□□□ -1.71
GABPAQ06546 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC4.35□□□□□ -1.71
GABPAQ06546 AC068533.1-201ENST00000418542 415 ntBASIC4.35□□□□□ -1.71
GABPAQ06546 RPS27P5-201ENST00000444247 244 ntBASIC4.35□□□□□ -1.71
GABPAQ06546 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC4.35□□□□□ -1.71
GABPAQ06546 AC069540.1-201ENST00000446320 988 ntBASIC4.35□□□□□ -1.71
GABPAQ06546 AC073387.1-201ENST00000453261 709 ntBASIC4.35□□□□□ -1.71
GABPAQ06546 AC005229.2-201ENST00000456995 399 ntBASIC4.35□□□□□ -1.71
GABPAQ06546 AC006511.1-201ENST00000470614 315 ntBASIC4.35□□□□□ -1.71
GABPAQ06546 AC005912.1-201ENST00000495392 255 ntBASIC4.35□□□□□ -1.71
GABPAQ06546 AC069439.2-201ENST00000496403 789 ntTSL 2 BASIC4.35□□□□□ -1.71
GABPAQ06546 NUDT6-203ENST00000502270 678 ntTSL 5 BASIC4.35□□□□□ -1.71
GABPAQ06546 LINC01017-201ENST00000508823 768 ntTSL 3 BASIC4.35□□□□□ -1.71
GABPAQ06546 GPX8-208ENST00000515370 1036 ntTSL 2 BASIC4.35□□□□□ -1.71
GABPAQ06546 RNA5SP154-201ENST00000516193 111 ntBASIC4.35□□□□□ -1.71
GABPAQ06546 SUMO2P20-201ENST00000520803 283 ntBASIC4.35□□□□□ -1.71
GABPAQ06546 AP000619.3-201ENST00000535634 1127 ntBASIC4.35□□□□□ -1.71
GABPAQ06546 LINC02258-201ENST00000551280 777 ntTSL 2 BASIC4.35□□□□□ -1.71
GABPAQ06546 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC4.35□□□□□ -1.71
GABPAQ06546 MEG8-215ENST00000555354 469 ntTSL 3 BASIC4.35□□□□□ -1.71
GABPAQ06546 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC4.35□□□□□ -1.71
GABPAQ06546 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC4.35□□□□□ -1.71
GABPAQ06546 AC008537.2-201ENST00000596135 482 ntTSL 3 BASIC4.35□□□□□ -1.71
GABPAQ06546 AC018618.2-201ENST00000604770 446 ntBASIC4.35□□□□□ -1.71
GABPAQ06546 AL158211.2-201ENST00000607282 395 ntBASIC4.35□□□□□ -1.71
GABPAQ06546 AL391261.4-201ENST00000616012 481 ntBASIC4.35□□□□□ -1.71
GABPAQ06546 AC015726.3-201ENST00000624501 418 ntBASIC4.35□□□□□ -1.71
GABPAQ06546 AC024023.1-201ENST00000624530 922 ntBASIC4.35□□□□□ -1.71
GABPAQ06546 AP000553.6-201ENST00000641242 118 ntBASIC4.35□□□□□ -1.71
GABPAQ06546 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC4.35□□□□□ -1.71
GABPAQ06546 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC4.35□□□□□ -1.71
GABPAQ06546 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
GABPAQ06546 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
GABPAQ06546 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC4.35□□□□□ -1.71
GABPAQ06546 BBX-203ENST00000402543 3980 ntTSL 5 BASIC4.35□□□□□ -1.71
GABPAQ06546 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
GABPAQ06546 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
GABPAQ06546 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
GABPAQ06546 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
GABPAQ06546 ATP6V1G3-201ENST00000281087 630 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
GABPAQ06546 ATP6V1G3-202ENST00000309309 678 ntTSL 5 BASIC4.34□□□□□ -1.71
GABPAQ06546 MIR448-201ENST00000362131 111 ntBASIC4.34□□□□□ -1.71
GABPAQ06546 C4orf47-201ENST00000378850 1134 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
GABPAQ06546 S100G-201ENST00000380200 455 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
GABPAQ06546 MIR7-3-201ENST00000384898 110 ntBASIC4.34□□□□□ -1.71
GABPAQ06546 AL160275.2-201ENST00000412010 394 ntBASIC4.34□□□□□ -1.71
GABPAQ06546 RPS29P4-201ENST00000414733 161 ntBASIC4.34□□□□□ -1.71
GABPAQ06546 AL031429.1-201ENST00000426775 749 ntTSL 2 BASIC4.34□□□□□ -1.71
GABPAQ06546 HIGD1AP12-201ENST00000427832 281 ntBASIC4.34□□□□□ -1.71
GABPAQ06546 AP000907.1-201ENST00000428428 510 ntBASIC4.34□□□□□ -1.71
GABPAQ06546 AC087650.1-201ENST00000431445 468 ntBASIC4.34□□□□□ -1.71
GABPAQ06546 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC4.34□□□□□ -1.71
GABPAQ06546 LMO7DN-IT1-201ENST00000436872 321 ntTSL 3 BASIC4.34□□□□□ -1.71
GABPAQ06546 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC4.34□□□□□ -1.71
GABPAQ06546 RNFT1P2-201ENST00000443064 757 ntBASIC4.34□□□□□ -1.71
GABPAQ06546 AC097499.1-201ENST00000444277 208 ntBASIC4.34□□□□□ -1.71
GABPAQ06546 RPL21P23-201ENST00000446654 460 ntBASIC4.34□□□□□ -1.71
GABPAQ06546 SNORD105B-201ENST00000458770 79 ntBASIC4.34□□□□□ -1.71
GABPAQ06546 RN7SL293P-201ENST00000481765 281 ntBASIC4.34□□□□□ -1.71
GABPAQ06546 TRBV12-2-201ENST00000489763 344 ntBASIC4.34□□□□□ -1.71
GABPAQ06546 PDCD10-216ENST00000492396 814 ntTSL 5 BASIC4.34□□□□□ -1.71
GABPAQ06546 AC010627.1-201ENST00000503819 1294 ntBASIC4.34□□□□□ -1.71
GABPAQ06546 LINC01088-208ENST00000511895 795 ntTSL 2 BASIC4.34□□□□□ -1.71
GABPAQ06546 AC104350.1-201ENST00000518750 877 ntTSL 3 BASIC4.34□□□□□ -1.71
GABPAQ06546 DUXAP2-201ENST00000519198 589 ntBASIC4.34□□□□□ -1.71
GABPAQ06546 MAL2-205ENST00000521048 575 ntTSL 4 BASIC4.34□□□□□ -1.71
GABPAQ06546 AC008011.1-201ENST00000545989 227 ntBASIC4.34□□□□□ -1.71
GABPAQ06546 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC4.34□□□□□ -1.71
GABPAQ06546 AL118556.1-201ENST00000555257 502 ntTSL 2 BASIC4.34□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 108.9 ms