Protein–RNA interactions for Protein: P31277

HOXD11, Homeobox protein Hox-D11, humanhuman

Predicted RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD11P31277 RN7SL403P-201ENST00000481783 305 ntBASIC8.57□□□□□ -1.04
HOXD11P31277 SNORA31.22-201ENST00000517204 135 ntBASIC8.57□□□□□ -1.04
HOXD11P31277 TDGF1P5-201ENST00000523009 453 ntBASIC8.57□□□□□ -1.04
HOXD11P31277 TMEM185AP1-201ENST00000524311 546 ntBASIC8.57□□□□□ -1.04
HOXD11P31277 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC8.57□□□□□ -1.04
HOXD11P31277 AC211433.2-201ENST00000608433 387 ntBASIC8.57□□□□□ -1.04
HOXD11P31277 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC8.57□□□□□ -1.04
HOXD11P31277 AL590491.1-202ENST00000618038 394 ntBASIC8.57□□□□□ -1.04
HOXD11P31277 AC245028.3-201ENST00000618197 285 ntBASIC8.57□□□□□ -1.04
HOXD11P31277 AC073488.8-201ENST00000631952 757 ntBASIC8.57□□□□□ -1.04
HOXD11P31277 CLASP1-203ENST00000409078 8002 ntAPPRIS P1 TSL 5 BASIC8.57□□□□□ -1.04
HOXD11P31277 UTP23-201ENST00000309822 3699 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
HOXD11P31277 ZNF438-208ENST00000538351 3284 ntAPPRIS ALT2 TSL 2 BASIC8.57□□□□□ -1.04
HOXD11P31277 ZNF512-204ENST00000416005 3515 ntTSL 2 BASIC8.57□□□□□ -1.04
HOXD11P31277 SERPINA1-208ENST00000448921 3532 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
HOXD11P31277 WDR7-213ENST00000615645 5257 ntTSL 5 BASIC8.57□□□□□ -1.04
HOXD11P31277 CELF2-209ENST00000631460 5538 ntTSL 5 BASIC8.57□□□□□ -1.04
HOXD11P31277 ULBP1-201ENST00000229708 3142 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
HOXD11P31277 RNF14-202ENST00000356143 3999 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
HOXD11P31277 EPS8-213ENST00000543612 2965 ntAPPRIS P1 TSL 2 BASIC8.57□□□□□ -1.04
HOXD11P31277 EFNA5-201ENST00000333274 5335 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
HOXD11P31277 MROH9-201ENST00000367758 2227 ntAPPRIS P3 TSL 1 (best) BASIC8.57□□□□□ -1.04
HOXD11P31277 AP002358.1-201ENST00000399003 2805 ntTSL 2 BASIC8.57□□□□□ -1.04
HOXD11P31277 ACSL1-211ENST00000515030 3948 ntAPPRIS P3 TSL 5 BASIC8.57□□□□□ -1.04
HOXD11P31277 AP3M1-202ENST00000372745 2320 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
HOXD11P31277 GHR-212ENST00000620156 4529 ntTSL 5 BASIC8.57□□□□□ -1.04
HOXD11P31277 AL008721.2-201ENST00000609475 3754 ntBASIC8.57□□□□□ -1.04
HOXD11P31277 TWF1-211ENST00000552521 3012 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
HOXD11P31277 BTBD3-215ENST00000618918 4486 ntAPPRIS ALT1 TSL 4 BASIC8.56□□□□□ -1.04
HOXD11P31277 AL359924.1-201ENST00000450451 3127 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
HOXD11P31277 TNFRSF9-204ENST00000615230 5970 ntAPPRIS P1 TSL 5 BASIC8.56□□□□□ -1.04
HOXD11P31277 CCDC77-201ENST00000239830 2371 ntAPPRIS P3 TSL 2 BASIC8.56□□□□□ -1.04
HOXD11P31277 TMEM169-201ENST00000295658 3342 ntAPPRIS P1 TSL 2 BASIC8.56□□□□□ -1.04
HOXD11P31277 EPB41L5-202ENST00000331393 1777 ntAPPRIS P1 TSL 2 BASIC8.56□□□□□ -1.04
HOXD11P31277 MYH1-201ENST00000226207 6024 ntAPPRIS P1 TSL 5 BASIC8.56□□□□□ -1.04
HOXD11P31277 DDIAS-211ENST00000533655 3533 ntAPPRIS P2 TSL 1 (best) BASIC8.56□□□□□ -1.04
HOXD11P31277 LINC02532-208ENST00000602621 2232 ntTSL 2 BASIC8.56□□□□□ -1.04
HOXD11P31277 ZNF432-201ENST00000221315 2577 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
HOXD11P31277 FASTKD2-202ENST00000402774 2586 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
HOXD11P31277 ALOX12P2-210ENST00000574727 4326 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
HOXD11P31277 Y_RNA.466-201ENST00000384294 113 ntBASIC8.56□□□□□ -1.04
HOXD11P31277 SNORA72-201ENST00000384339 132 ntBASIC8.56□□□□□ -1.04
HOXD11P31277 Y_RNA.622-201ENST00000411091 108 ntBASIC8.56□□□□□ -1.04
HOXD11P31277 AC012451.1-201ENST00000412312 357 ntTSL 3 BASIC8.56□□□□□ -1.04
HOXD11P31277 AL139042.1-201ENST00000429137 305 ntTSL 3 BASIC8.56□□□□□ -1.04
HOXD11P31277 CYCSP6-201ENST00000434498 302 ntBASIC8.56□□□□□ -1.04
HOXD11P31277 AC004006.1-201ENST00000434994 377 ntBASIC8.56□□□□□ -1.04
HOXD11P31277 AC100832.1-201ENST00000471945 383 ntBASIC8.56□□□□□ -1.04
HOXD11P31277 RNU6-1095P-201ENST00000516148 108 ntBASIC8.56□□□□□ -1.04
HOXD11P31277 AC084121.2-201ENST00000528788 264 ntBASIC8.56□□□□□ -1.04
HOXD11P31277 AC087379.2-201ENST00000532242 471 ntTSL 3 BASIC8.56□□□□□ -1.04
HOXD11P31277 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC8.56□□□□□ -1.04
HOXD11P31277 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC8.56□□□□□ -1.04
HOXD11P31277 AC010761.2-202ENST00000582536 391 ntTSL 5 BASIC8.56□□□□□ -1.04
HOXD11P31277 MIR7162-201ENST00000611134 69 ntBASIC8.56□□□□□ -1.04
HOXD11P31277 AL445647.2-201ENST00000615170 130 ntBASIC8.56□□□□□ -1.04
HOXD11P31277 MIR6761-201ENST00000617899 72 ntBASIC8.56□□□□□ -1.04
HOXD11P31277 CSDE1-214ENST00000530886 3459 ntTSL 5 BASIC8.56□□□□□ -1.04
HOXD11P31277 CD46-202ENST00000322918 3124 ntAPPRIS ALT2 TSL 1 (best) BASIC8.56□□□□□ -1.04
HOXD11P31277 ZNF233-201ENST00000391958 2784 ntAPPRIS P1 TSL 2 BASIC8.56□□□□□ -1.04
HOXD11P31277 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC8.56□□□□□ -1.04
HOXD11P31277 STEAP3-AS1-201ENST00000454260 3218 ntTSL 2 BASIC8.56□□□□□ -1.04
HOXD11P31277 EPHB2-201ENST00000374627 4014 ntAPPRIS ALT2 TSL 5 BASIC8.56□□□□□ -1.04
HOXD11P31277 AC078880.4-201ENST00000617627 1749 ntBASIC8.56□□□□□ -1.04
HOXD11P31277 C3orf30-201ENST00000295622 1814 ntAPPRIS P2 TSL 1 (best) BASIC8.56□□□□□ -1.04
HOXD11P31277 ZNF253-201ENST00000355650 2268 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
HOXD11P31277 MAPK10-392ENST00000642103 3126 ntAPPRIS P2 BASIC8.56□□□□□ -1.04
HOXD11P31277 MYEF2-202ENST00000324324 10360 ntAPPRIS P3 TSL 1 (best) BASIC8.56□□□□□ -1.04
HOXD11P31277 ZNF561-201ENST00000302851 4693 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
HOXD11P31277 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
HOXD11P31277 DGKG-202ENST00000344484 3445 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
HOXD11P31277 MAT1A-201ENST00000372213 3410 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
HOXD11P31277 TTC3-202ENST00000355666 7712 ntAPPRIS P1 TSL 5 BASIC8.55□□□□□ -1.04
HOXD11P31277 DPY19L2P2-203ENST00000435536 1858 ntBASIC8.55□□□□□ -1.04
HOXD11P31277 ARNT-208ENST00000505755 2427 ntTSL 2 BASIC8.55□□□□□ -1.04
HOXD11P31277 CPEB4-201ENST00000265085 9483 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
HOXD11P31277 ATAD1-201ENST00000308448 4640 ntAPPRIS P1 TSL 2 BASIC8.55□□□□□ -1.04
HOXD11P31277 GRIA3-209ENST00000622768 5173 ntAPPRIS ALT1 TSL 5 BASIC8.55□□□□□ -1.04
HOXD11P31277 KIF13A-204ENST00000378826 5747 ntAPPRIS ALT2 TSL 1 (best) BASIC8.55□□□□□ -1.04
HOXD11P31277 ITGA10-204ENST00000539363 4735 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
HOXD11P31277 ERC1-213ENST00000543086 9241 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
HOXD11P31277 GABRA1-203ENST00000428797 4285 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
HOXD11P31277 MED12-202ENST00000374080 6795 ntAPPRIS P2 TSL 1 (best) BASIC8.55□□□□□ -1.04
HOXD11P31277 ADNP-206ENST00000621696 6224 ntAPPRIS P1 TSL 5 BASIC8.55□□□□□ -1.04
HOXD11P31277 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC8.55□□□□□ -1.04
HOXD11P31277 WDR75-201ENST00000314761 2701 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
HOXD11P31277 MYOCD-201ENST00000343344 2817 ntAPPRIS P3 TSL 1 (best) BASIC8.55□□□□□ -1.04
HOXD11P31277 SLMAP-203ENST00000383718 6749 ntTSL 2 BASIC8.55□□□□□ -1.04
HOXD11P31277 MRPS33-201ENST00000324787 4241 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
HOXD11P31277 GABRP-203ENST00000518525 3576 ntAPPRIS P1 TSL 5 BASIC8.55□□□□□ -1.04
HOXD11P31277 TTLL9-211ENST00000620043 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC8.55□□□□□ -1.04
HOXD11P31277 ZMYND8-219ENST00000611941 5090 ntAPPRIS ALT2 TSL 1 (best) BASIC8.55□□□□□ -1.04
HOXD11P31277 CD36-209ENST00000435819 2365 ntAPPRIS P1 TSL 2 BASIC8.55□□□□□ -1.04
HOXD11P31277 TRAPPC13-202ENST00000399438 3221 ntAPPRIS ALT1 TSL 2 BASIC8.55□□□□□ -1.04
HOXD11P31277 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
HOXD11P31277 ZNF236-201ENST00000253159 8124 ntAPPRIS P3 TSL 1 (best) BASIC8.55□□□□□ -1.04
HOXD11P31277 DLG2-229ENST00000531015 2892 ntTSL 2 BASIC8.55□□□□□ -1.04
HOXD11P31277 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC8.55□□□□□ -1.04
HOXD11P31277 Y_RNA.49-201ENST00000362714 112 ntBASIC8.55□□□□□ -1.04
HOXD11P31277 SNORA68B-201ENST00000364518 133 ntBASIC8.55□□□□□ -1.04
Retrieved 100 of 98,524 protein–RNA pairs in 167.3 ms