Protein–RNA interactions for Protein: Q8NDM7

CFAP43, Cilia- and flagella-associated protein 43, humanhuman

Predictions only

Length 1,665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP43Q8NDM7 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
CFAP43Q8NDM7 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
CFAP43Q8NDM7 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC5.37□□□□□ -1.55
CFAP43Q8NDM7 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
CFAP43Q8NDM7 HSPE1P8-201ENST00000406997 288 ntBASIC5.37□□□□□ -1.55
CFAP43Q8NDM7 ANP32BP2-201ENST00000454525 545 ntBASIC5.37□□□□□ -1.55
CFAP43Q8NDM7 HMGB3P14-201ENST00000494195 599 ntBASIC5.37□□□□□ -1.55
CFAP43Q8NDM7 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC5.37□□□□□ -1.55
CFAP43Q8NDM7 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC5.37□□□□□ -1.55
CFAP43Q8NDM7 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC5.37□□□□□ -1.55
CFAP43Q8NDM7 AC004024.1-201ENST00000549244 247 ntBASIC5.37□□□□□ -1.55
CFAP43Q8NDM7 AL645937.1-201ENST00000641739 1652 ntBASIC5.37□□□□□ -1.55
CFAP43Q8NDM7 AC027290.2-201ENST00000623210 18662 ntBASIC5.37□□□□□ -1.55
CFAP43Q8NDM7 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC5.37□□□□□ -1.55
CFAP43Q8NDM7 LINC02471-203ENST00000641941 4752 ntBASIC5.37□□□□□ -1.55
CFAP43Q8NDM7 STXBP4-203ENST00000405898 2229 ntTSL 5 BASIC5.37□□□□□ -1.55
CFAP43Q8NDM7 DDX6P1-205ENST00000441966 1436 ntBASIC5.37□□□□□ -1.55
CFAP43Q8NDM7 RPS26P47-201ENST00000427219 348 ntBASIC5.37□□□□□ -1.55
CFAP43Q8NDM7 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC5.37□□□□□ -1.55
CFAP43Q8NDM7 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC5.37□□□□□ -1.55
CFAP43Q8NDM7 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
CFAP43Q8NDM7 RPS26P3-201ENST00000470205 348 ntBASIC5.37□□□□□ -1.55
CFAP43Q8NDM7 AC004057.1-201ENST00000485827 348 ntBASIC5.37□□□□□ -1.55
CFAP43Q8NDM7 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC5.37□□□□□ -1.55
CFAP43Q8NDM7 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC5.37□□□□□ -1.55
CFAP43Q8NDM7 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC5.37□□□□□ -1.55
CFAP43Q8NDM7 SNORD39.4-201ENST00000620099 78 ntBASIC5.37□□□□□ -1.55
CFAP43Q8NDM7 LINC02342-201ENST00000627910 461 ntTSL 5 BASIC5.37□□□□□ -1.55
CFAP43Q8NDM7 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC5.37□□□□□ -1.55
CFAP43Q8NDM7 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
CFAP43Q8NDM7 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC5.36□□□□□ -1.55
CFAP43Q8NDM7 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
CFAP43Q8NDM7 AC015813.6-201ENST00000624409 5808 ntBASIC5.36□□□□□ -1.55
CFAP43Q8NDM7 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC5.36□□□□□ -1.55
CFAP43Q8NDM7 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC5.36□□□□□ -1.55
CFAP43Q8NDM7 NCAPGP1-201ENST00000505112 1814 ntBASIC5.36□□□□□ -1.55
CFAP43Q8NDM7 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
CFAP43Q8NDM7 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC5.36□□□□□ -1.55
CFAP43Q8NDM7 RNU1-70P-201ENST00000362618 164 ntBASIC5.36□□□□□ -1.55
CFAP43Q8NDM7 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC5.36□□□□□ -1.55
CFAP43Q8NDM7 PRR16-203ENST00000446965 1152 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
CFAP43Q8NDM7 AC138409.2-202ENST00000507274 458 ntBASIC5.36□□□□□ -1.55
CFAP43Q8NDM7 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC5.36□□□□□ -1.55
CFAP43Q8NDM7 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC5.36□□□□□ -1.55
CFAP43Q8NDM7 AC113192.3-201ENST00000529152 742 ntBASIC5.36□□□□□ -1.55
CFAP43Q8NDM7 AC013652.1-202ENST00000561058 570 ntTSL 4 BASIC5.36□□□□□ -1.55
CFAP43Q8NDM7 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
CFAP43Q8NDM7 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
CFAP43Q8NDM7 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC5.36□□□□□ -1.55
CFAP43Q8NDM7 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC5.36□□□□□ -1.55
CFAP43Q8NDM7 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
CFAP43Q8NDM7 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
CFAP43Q8NDM7 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC5.35□□□□□ -1.55
CFAP43Q8NDM7 RN7SL93P-201ENST00000463035 293 ntBASIC5.35□□□□□ -1.55
CFAP43Q8NDM7 RPL7P38-201ENST00000488396 739 ntBASIC5.35□□□□□ -1.55
CFAP43Q8NDM7 AC110794.1-201ENST00000505816 425 ntBASIC5.35□□□□□ -1.55
CFAP43Q8NDM7 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC5.35□□□□□ -1.55
CFAP43Q8NDM7 HMGB1P19-201ENST00000517578 577 ntBASIC5.35□□□□□ -1.55
CFAP43Q8NDM7 AL121576.1-201ENST00000556055 276 ntBASIC5.35□□□□□ -1.55
CFAP43Q8NDM7 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC5.35□□□□□ -1.55
CFAP43Q8NDM7 Z83843.1-201ENST00000604070 3685 ntBASIC5.35□□□□□ -1.55
CFAP43Q8NDM7 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
CFAP43Q8NDM7 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC5.35□□□□□ -1.55
CFAP43Q8NDM7 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC5.35□□□□□ -1.55
CFAP43Q8NDM7 ERMN-204ENST00000409925 556 ntTSL 4 BASIC5.34□□□□□ -1.55
CFAP43Q8NDM7 TRBV24OR9-2-201ENST00000416632 435 ntBASIC5.34□□□□□ -1.55
CFAP43Q8NDM7 RPS20P1-201ENST00000434853 354 ntBASIC5.34□□□□□ -1.55
CFAP43Q8NDM7 AC074367.1-201ENST00000438685 1125 ntBASIC5.34□□□□□ -1.55
CFAP43Q8NDM7 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC5.34□□□□□ -1.55
CFAP43Q8NDM7 HMGB3P13-201ENST00000511263 607 ntBASIC5.34□□□□□ -1.55
CFAP43Q8NDM7 IGKV2-26-201ENST00000518305 343 ntBASIC5.34□□□□□ -1.55
CFAP43Q8NDM7 TBCA-206ENST00000518338 551 ntTSL 2 BASIC5.34□□□□□ -1.55
CFAP43Q8NDM7 MIR7106-201ENST00000612419 65 ntBASIC5.34□□□□□ -1.55
CFAP43Q8NDM7 AC063952.1-203ENST00000634410 658 ntBASIC5.34□□□□□ -1.55
CFAP43Q8NDM7 NMD3P1-201ENST00000439704 1488 ntBASIC5.34□□□□□ -1.55
CFAP43Q8NDM7 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC5.34□□□□□ -1.55
CFAP43Q8NDM7 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC5.34□□□□□ -1.55
CFAP43Q8NDM7 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC5.34□□□□□ -1.55
CFAP43Q8NDM7 CR381670.1-201ENST00000624291 1693 ntBASIC5.34□□□□□ -1.56
CFAP43Q8NDM7 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.56
CFAP43Q8NDM7 SETP15-201ENST00000412724 337 ntBASIC5.34□□□□□ -1.56
CFAP43Q8NDM7 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC5.34□□□□□ -1.56
CFAP43Q8NDM7 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC5.34□□□□□ -1.56
CFAP43Q8NDM7 AC004924.1-201ENST00000480160 781 ntBASIC5.34□□□□□ -1.56
CFAP43Q8NDM7 SCARNA20.6-201ENST00000517251 106 ntBASIC5.34□□□□□ -1.56
CFAP43Q8NDM7 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CFAP43Q8NDM7 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC5.33□□□□□ -1.56
CFAP43Q8NDM7 LINC01362-202ENST00000452901 1712 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CFAP43Q8NDM7 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC5.33□□□□□ -1.56
CFAP43Q8NDM7 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CFAP43Q8NDM7 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC5.33□□□□□ -1.56
CFAP43Q8NDM7 AL365214.2-201ENST00000433684 1365 ntTSL 2 BASIC5.33□□□□□ -1.56
CFAP43Q8NDM7 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CFAP43Q8NDM7 CRP-203ENST00000368111 512 ntTSL 3 BASIC5.33□□□□□ -1.56
CFAP43Q8NDM7 RNU6-729P-201ENST00000384399 107 ntBASIC5.33□□□□□ -1.56
CFAP43Q8NDM7 Z99755.1-201ENST00000414048 380 ntBASIC5.33□□□□□ -1.56
CFAP43Q8NDM7 DPPA2P2-201ENST00000418220 897 ntBASIC5.33□□□□□ -1.56
CFAP43Q8NDM7 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC5.33□□□□□ -1.56
CFAP43Q8NDM7 FCF1P3-201ENST00000496394 590 ntBASIC5.33□□□□□ -1.56
CFAP43Q8NDM7 AP000926.4-201ENST00000527351 454 ntBASIC5.33□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 78.9 ms