Protein–RNA interactions for Protein: P78527

PRKDC, DNA-dependent protein kinase catalytic subunit, humanhuman

Known RBP Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDCP78527 HEMK1-203ENST00000434410 17064 ntAPPRIS P1 TSL 2 BASIC2.39□□□□□ -2.03
PRKDCP78527 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
PRKDCP78527 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC2.39□□□□□ -2.03
PRKDCP78527 OR6C74-201ENST00000343870 1105 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
PRKDCP78527 RNU1-15P-201ENST00000353977 144 ntBASIC2.39□□□□□ -2.03
PRKDCP78527 ARV1-202ENST00000366658 1170 ntTSL 5 BASIC2.39□□□□□ -2.03
PRKDCP78527 AC007563.3-201ENST00000433233 371 ntBASIC2.39□□□□□ -2.03
PRKDCP78527 RPL23AP23-201ENST00000452590 471 ntBASIC2.39□□□□□ -2.03
PRKDCP78527 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
PRKDCP78527 AC105924.1-201ENST00000504057 339 ntTSL 3 BASIC2.39□□□□□ -2.03
PRKDCP78527 EMP1-206ENST00000537612 505 ntTSL 3 BASIC2.39□□□□□ -2.03
PRKDCP78527 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC2.39□□□□□ -2.03
PRKDCP78527 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC2.39□□□□□ -2.03
PRKDCP78527 AC023908.1-201ENST00000559899 567 ntTSL 4 BASIC2.39□□□□□ -2.03
PRKDCP78527 AL592295.2-201ENST00000612578 206 ntBASIC2.39□□□□□ -2.03
PRKDCP78527 AP004607.9-201ENST00000618202 316 ntBASIC2.39□□□□□ -2.03
PRKDCP78527 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
PRKDCP78527 CLCN3-211ENST00000613795 5874 ntTSL 5 BASIC2.39□□□□□ -2.03
PRKDCP78527 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC2.39□□□□□ -2.03
PRKDCP78527 DCC-202ENST00000412726 9525 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
PRKDCP78527 TTC3-201ENST00000354749 9084 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
PRKDCP78527 AC104446.1-201ENST00000613728 1321 ntBASIC2.39□□□□□ -2.03
PRKDCP78527 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
PRKDCP78527 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC2.38□□□□□ -2.03
PRKDCP78527 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC2.38□□□□□ -2.03
PRKDCP78527 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC2.38□□□□□ -2.03
PRKDCP78527 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC2.38□□□□□ -2.03
PRKDCP78527 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC2.38□□□□□ -2.03
PRKDCP78527 AC112198.1-201ENST00000505369 1220 ntBASIC2.38□□□□□ -2.03
PRKDCP78527 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC2.38□□□□□ -2.03
PRKDCP78527 RN7SKP31-201ENST00000516354 278 ntBASIC2.38□□□□□ -2.03
PRKDCP78527 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC2.38□□□□□ -2.03
PRKDCP78527 AC007673.1-201ENST00000590604 1100 ntTSL 5 BASIC2.38□□□□□ -2.03
PRKDCP78527 AC008638.3-201ENST00000603341 463 ntBASIC2.38□□□□□ -2.03
PRKDCP78527 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC2.38□□□□□ -2.03
PRKDCP78527 DARS-AS1-230ENST00000631306 530 ntTSL 5 BASIC2.38□□□□□ -2.03
PRKDCP78527 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC2.38□□□□□ -2.03
PRKDCP78527 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC2.38□□□□□ -2.03
PRKDCP78527 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC2.38□□□□□ -2.03
PRKDCP78527 AL672167.1-206ENST00000356293 943 ntBASIC2.38□□□□□ -2.03
PRKDCP78527 RNU4-47P-201ENST00000410876 114 ntBASIC2.38□□□□□ -2.03
PRKDCP78527 AC079600.2-201ENST00000550076 130 ntBASIC2.38□□□□□ -2.03
PRKDCP78527 AL133457.1-201ENST00000564251 987 ntBASIC2.38□□□□□ -2.03
PRKDCP78527 AC018371.1-201ENST00000584560 640 ntTSL 3 BASIC2.38□□□□□ -2.03
PRKDCP78527 AC012603.1-201ENST00000606424 528 ntBASIC2.38□□□□□ -2.03
PRKDCP78527 AC103710.3-201ENST00000608157 948 ntBASIC2.38□□□□□ -2.03
PRKDCP78527 DCC-203ENST00000442544 10206 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
PRKDCP78527 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
PRKDCP78527 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC2.38□□□□□ -2.03
PRKDCP78527 KIAA1109-201ENST00000264501 15896 ntAPPRIS P1 TSL 5 BASIC2.38□□□□□ -2.03
PRKDCP78527 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC2.38□□□□□ -2.03
PRKDCP78527 OR51A2-201ENST00000380371 942 ntAPPRIS P1 BASIC2.38□□□□□ -2.03
PRKDCP78527 MIRLET7DHG-201ENST00000416309 1294 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
PRKDCP78527 TRBV12-2-201ENST00000489763 344 ntBASIC2.38□□□□□ -2.03
PRKDCP78527 ANXA2P1-201ENST00000505539 926 ntBASIC2.38□□□□□ -2.03
PRKDCP78527 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC2.38□□□□□ -2.03
PRKDCP78527 EEF1A1P37-201ENST00000522748 715 ntBASIC2.38□□□□□ -2.03
PRKDCP78527 AC073864.1-201ENST00000540161 562 ntTSL 4 BASIC2.38□□□□□ -2.03
PRKDCP78527 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC2.38□□□□□ -2.03
PRKDCP78527 RDM1-219ENST00000615378 542 ntTSL 3 BASIC2.38□□□□□ -2.03
PRKDCP78527 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC2.38□□□□□ -2.03
PRKDCP78527 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC2.38□□□□□ -2.03
PRKDCP78527 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC2.38□□□□□ -2.03
PRKDCP78527 BTG4-203ENST00000525791 1394 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
PRKDCP78527 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
PRKDCP78527 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC2.37□□□□□ -2.03
PRKDCP78527 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC2.37□□□□□ -2.03
PRKDCP78527 TRGV5P-201ENST00000419915 354 ntBASIC2.37□□□□□ -2.03
PRKDCP78527 MOB1AP1-201ENST00000430903 535 ntBASIC2.37□□□□□ -2.03
PRKDCP78527 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC2.37□□□□□ -2.03
PRKDCP78527 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC2.37□□□□□ -2.03
PRKDCP78527 AP002404.1-201ENST00000532005 451 ntBASIC2.37□□□□□ -2.03
PRKDCP78527 HMGB1P6-201ENST00000569046 646 ntBASIC2.37□□□□□ -2.03
PRKDCP78527 ELOCP29-201ENST00000588193 334 ntBASIC2.37□□□□□ -2.03
PRKDCP78527 OR7M1P-201ENST00000608946 533 ntBASIC2.37□□□□□ -2.03
PRKDCP78527 AC006946.3-201ENST00000609791 756 ntBASIC2.37□□□□□ -2.03
PRKDCP78527 OR5AC4P-202ENST00000642086 985 ntBASIC2.37□□□□□ -2.03
PRKDCP78527 OR51C1P-202ENST00000641159 1444 ntBASIC2.37□□□□□ -2.03
PRKDCP78527 CR383658.2-201ENST00000547576 1525 ntBASIC2.37□□□□□ -2.03
PRKDCP78527 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
PRKDCP78527 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
PRKDCP78527 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC2.37□□□□□ -2.03
PRKDCP78527 AC019097.1-201ENST00000424783 735 ntBASIC2.37□□□□□ -2.03
PRKDCP78527 IGKV3-31-201ENST00000523109 329 ntBASIC2.37□□□□□ -2.03
PRKDCP78527 OR4A12P-201ENST00000530847 918 ntBASIC2.37□□□□□ -2.03
PRKDCP78527 SNHG1-205ENST00000537869 1038 ntTSL 3 BASIC2.37□□□□□ -2.03
PRKDCP78527 AC025811.1-201ENST00000604312 472 ntBASIC2.37□□□□□ -2.03
PRKDCP78527 AC004943.1-201ENST00000620814 561 ntTSL 5 BASIC2.37□□□□□ -2.03
PRKDCP78527 IGHVIII-44-202ENST00000636235 289 ntBASIC2.37□□□□□ -2.03
PRKDCP78527 AC099063.3-201ENST00000642066 185 ntBASIC2.37□□□□□ -2.03
PRKDCP78527 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC2.37□□□□□ -2.03
PRKDCP78527 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
PRKDCP78527 AC007496.3-201ENST00000624987 3443 ntBASIC2.37□□□□□ -2.03
PRKDCP78527 CCDC171-201ENST00000380701 6512 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
PRKDCP78527 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC2.37□□□□□ -2.03
PRKDCP78527 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC2.37□□□□□ -2.03
PRKDCP78527 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC2.37□□□□□ -2.03
PRKDCP78527 AC017067.1-201ENST00000448570 447 ntTSL 5 BASIC2.37□□□□□ -2.03
PRKDCP78527 RPS20P22-201ENST00000473700 357 ntBASIC2.37□□□□□ -2.03
PRKDCP78527 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC2.37□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 79 ms