RNA–Protein interactions for RNA: ENST00000569046.1

HMGB1P6-201, Transcript of high mobility group box 1 pseudogene 6, humanhuman

BASIC

Gene HMGB1P6, Length 646 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P6-201ENST00000569046 AEBP2Q6ZN18 517 aaPredicted RBP19.01■□□□□ 0.63
HMGB1P6-201ENST00000569046 CHIC1Q5VXU3 224 aa18.45■□□□□ 0.54
HMGB1P6-201ENST00000569046 PHF23Q9BUL5 403 aaPredicted RBP16.28■□□□□ 0.2
HMGB1P6-201ENST00000569046 SENP3Q9H4L4 574 aaPredicted RBP16.03■□□□□ 0.16
HMGB1P6-201ENST00000569046 FOXD1Q16676 465 aa14.95□□□□□ -0.02
HMGB1P6-201ENST00000569046 PLPPR3Q6T4P5 718 aa14.92□□□□□ -0.02
HMGB1P6-201ENST00000569046 PPP6R1Q9UPN7 881 aa14.39□□□□□ -0.11
HMGB1P6-201ENST00000569046 ADRA2BP18089 450 aa14.35□□□□□ -0.11
HMGB1P6-201ENST00000569046 PIAS4Q8N2W9 510 aaPredicted RBP14.05□□□□□ -0.16
HMGB1P6-201ENST00000569046 MSH5O43196 834 aa13.73□□□□□ -0.21
HMGB1P6-201ENST00000569046 PPP4R3CPQ6ZMV5 832 aa13.17□□□□□ -0.3
HMGB1P6-201ENST00000569046 MAPK8IP2Q13387 824 aaPredicted RBP13.06□□□□□ -0.32
HMGB1P6-201ENST00000569046 SCAF1Q9H7N4 1312 aaKnown RBP13.01□□□□□ -0.33
HMGB1P6-201ENST00000569046 KCNA4P22459 653 aa12.84□□□□□ -0.35
HMGB1P6-201ENST00000569046 DMRT2Q9Y5R5 561 aa12.81□□□□□ -0.36
HMGB1P6-201ENST00000569046 CNKSR2Q8WXI2 1034 aa12.78□□□□□ -0.36
HMGB1P6-201ENST00000569046 NCBP3Q53F19 620 aaKnown RBP12.74□□□□□ -0.37
HMGB1P6-201ENST00000569046 POTEDQ86YR6 584 aa12.66□□□□□ -0.38
HMGB1P6-201ENST00000569046 NPM3O75607 178 aaKnown RBP12.64□□□□□ -0.39
HMGB1P6-201ENST00000569046 RNF216Q9NWF9 866 aaPredicted RBP12.56□□□□□ -0.4
HMGB1P6-201ENST00000569046 HOXD11P31277 338 aaPredicted RBP12.54□□□□□ -0.4
HMGB1P6-201ENST00000569046 DCAF8L1A6NGE4 600 aa12.25□□□□□ -0.45
HMGB1P6-201ENST00000569046 DNAJC5BQ9UF47 199 aa12.24□□□□□ -0.45
HMGB1P6-201ENST00000569046 SLC4A1APQ9BWU0 796 aaKnown RBP12.17□□□□□ -0.46
HMGB1P6-201ENST00000569046 SLC4A2P04920 1241 aa11.98□□□□□ -0.49
HMGB1P6-201ENST00000569046 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.91□□□□□ -0.5
HMGB1P6-201ENST00000569046 ZBTB22O15209 634 aa11.85□□□□□ -0.51
HMGB1P6-201ENST00000569046 RNF39Q9H2S5 420 aa11.81□□□□□ -0.52
HMGB1P6-201ENST00000569046 EHMT2Q96KQ7 1210 aa11.8□□□□□ -0.52
HMGB1P6-201ENST00000569046 FOXD4L1Q9NU39 408 aa11.78□□□□□ -0.52
HMGB1P6-201ENST00000569046 U3KPZ7 1027 aaPredicted RBP11.78□□□□□ -0.52
HMGB1P6-201ENST00000569046 CSRNP3Q8WYN3 585 aa11.71□□□□□ -0.53
HMGB1P6-201ENST00000569046 MYCNP04198 464 aaPredicted RBP11.63□□□□□ -0.55
HMGB1P6-201ENST00000569046 C1QBPQ07021 282 aaKnown RBP11.62□□□□□ -0.55
HMGB1P6-201ENST00000569046 CACNB1Q02641 598 aaPredicted RBP11.51□□□□□ -0.57
HMGB1P6-201ENST00000569046 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.49□□□□□ -0.57
HMGB1P6-201ENST00000569046 HNRNPUL2Q1KMD3 747 aaKnown RBP11.49□□□□□ -0.57
HMGB1P6-201ENST00000569046 SAMD1Q6SPF0 538 aaPredicted RBP11.48□□□□□ -0.57
HMGB1P6-201ENST00000569046 SPINK5Q9NQ38 1064 aaPredicted RBP11.48□□□□□ -0.57
HMGB1P6-201ENST00000569046 ATF5Q9Y2D1 282 aaPredicted RBP11.42□□□□□ -0.58
HMGB1P6-201ENST00000569046 CAPN15O75808 1086 aa11.37□□□□□ -0.59
HMGB1P6-201ENST00000569046 APLP2Q06481 763 aa11.36□□□□□ -0.59
HMGB1P6-201ENST00000569046 ATXN8OSP0DMR3 200 aa11.34□□□□□ -0.59
HMGB1P6-201ENST00000569046 TRHP20396 242 aaPredicted RBP11.32□□□□□ -0.6
HMGB1P6-201ENST00000569046 ZNF219Q9P2Y4 722 aaPredicted RBP11.28□□□□□ -0.6
HMGB1P6-201ENST00000569046 DSG3P32926 999 aa11.22□□□□□ -0.61
HMGB1P6-201ENST00000569046 ABCB7O75027 752 aa11.19□□□□□ -0.62
HMGB1P6-201ENST00000569046 POLA2Q14181 598 aa11.14□□□□□ -0.63
HMGB1P6-201ENST00000569046 MKRN4PQ13434 485 aaPredicted RBP10.91□□□□□ -0.66
HMGB1P6-201ENST00000569046 ZBTB12Q9Y330 459 aaPredicted RBP10.86□□□□□ -0.67
HMGB1P6-201ENST00000569046 FBLN2P98095 1184 aa10.82□□□□□ -0.68
HMGB1P6-201ENST00000569046 OSCARQ8IYS5 282 aa10.77□□□□□ -0.69
HMGB1P6-201ENST00000569046 RBM42Q9BTD8 480 aaKnown RBP10.62□□□□□ -0.71
HMGB1P6-201ENST00000569046 SPDYE2BA6NHP3 402 aa10.61□□□□□ -0.71
HMGB1P6-201ENST00000569046 SPDYE6P0CI01 402 aa10.61□□□□□ -0.71
HMGB1P6-201ENST00000569046 SPDYE2Q495Y8 402 aa10.61□□□□□ -0.71
HMGB1P6-201ENST00000569046 SPDYE4A6NLX3 237 aa10.58□□□□□ -0.72
HMGB1P6-201ENST00000569046 ZNF692Q9BU19 519 aaPredicted RBP10.57□□□□□ -0.72
HMGB1P6-201ENST00000569046 FKBP8Q14318 412 aa10.56□□□□□ -0.72
HMGB1P6-201ENST00000569046 SSUH2Q9Y2M2 353 aa10.56□□□□□ -0.72
HMGB1P6-201ENST00000569046 AKT1S1Q96B36 256 aa10.51□□□□□ -0.73
HMGB1P6-201ENST00000569046 PABPN1Q86U42 306 aaKnown RBP eCLIP10.45□□□□□ -0.74
HMGB1P6-201ENST00000569046 REM2Q8IYK8 340 aaPredicted RBP10.44□□□□□ -0.74
HMGB1P6-201ENST00000569046 PROM2Q8N271 834 aa10.42□□□□□ -0.74
HMGB1P6-201ENST00000569046 PITPNM1O00562 1244 aa10.34□□□□□ -0.75
HMGB1P6-201ENST00000569046 SPDYE1Q8NFV5 336 aaPredicted RBP10.3□□□□□ -0.76
HMGB1P6-201ENST00000569046 CLEC11AQ9Y240 323 aa10.28□□□□□ -0.76
HMGB1P6-201ENST00000569046 CHRDL2Q6WN34 429 aa10.25□□□□□ -0.77
HMGB1P6-201ENST00000569046 STAG3Q9UJ98 1225 aa10.2□□□□□ -0.78
HMGB1P6-201ENST00000569046 PRR29P0C7W0 189 aa10.17□□□□□ -0.78
HMGB1P6-201ENST00000569046 FXR2P51116 673 aaKnown RBP eCLIP10.15□□□□□ -0.78
HMGB1P6-201ENST00000569046 PIP4P2Q8N4L2 257 aa10.13□□□□□ -0.79
HMGB1P6-201ENST00000569046 FBXO3Q9UK99 471 aa10.12□□□□□ -0.79
HMGB1P6-201ENST00000569046 CHADLQ6NUI6 762 aa10.09□□□□□ -0.79
HMGB1P6-201ENST00000569046 CREBZFQ9NS37 354 aa10.08□□□□□ -0.8
HMGB1P6-201ENST00000569046 PRKAR2AP13861 404 aaKnown RBP10.05□□□□□ -0.8
HMGB1P6-201ENST00000569046 VASPP50552 380 aaPredicted RBP10.05□□□□□ -0.8
HMGB1P6-201ENST00000569046 MIER1Q8N108 512 aa10.02□□□□□ -0.81
HMGB1P6-201ENST00000569046 MNX1P50219 401 aaPredicted RBP9.99□□□□□ -0.81
HMGB1P6-201ENST00000569046 POTEHQ6S545 545 aa9.99□□□□□ -0.81
HMGB1P6-201ENST00000569046 PLCD3Q8N3E9 789 aa9.99□□□□□ -0.81
HMGB1P6-201ENST00000569046 FARP1Q9Y4F1 1045 aaPredicted RBP9.95□□□□□ -0.82
HMGB1P6-201ENST00000569046 IFNLR1Q8IU57 520 aaPredicted RBP9.94□□□□□ -0.82
HMGB1P6-201ENST00000569046 PLEKHG5O94827 1062 aa9.89□□□□□ -0.83
HMGB1P6-201ENST00000569046 KLHL34Q8N239 644 aa9.86□□□□□ -0.83
HMGB1P6-201ENST00000569046 NPM1P06748 294 aaKnown RBP eCLIP9.83□□□□□ -0.84
HMGB1P6-201ENST00000569046 ZBTB47Q9UFB7 747 aaPredicted RBP9.83□□□□□ -0.84
HMGB1P6-201ENST00000569046 NUBP1P53384 320 aa9.81□□□□□ -0.84
HMGB1P6-201ENST00000569046 C19orf67A6NJJ6 358 aa9.8□□□□□ -0.84
HMGB1P6-201ENST00000569046 HAX1O00165 279 aa9.79□□□□□ -0.84
HMGB1P6-201ENST00000569046 EVX2Q03828 476 aa9.79□□□□□ -0.84
HMGB1P6-201ENST00000569046 RASEFQ8IZ41 740 aa9.79□□□□□ -0.84
HMGB1P6-201ENST00000569046 SPOCK2Q92563 424 aa9.77□□□□□ -0.85
HMGB1P6-201ENST00000569046 CD44P16070 742 aaKnown RBP9.76□□□□□ -0.85
HMGB1P6-201ENST00000569046 TSPYL2Q9H2G4 693 aaPredicted RBP9.72□□□□□ -0.85
HMGB1P6-201ENST00000569046 ZRANB1Q9UGI0 708 aa9.7□□□□□ -0.86
HMGB1P6-201ENST00000569046 DCAF8Q5TAQ9 597 aa9.67□□□□□ -0.86
HMGB1P6-201ENST00000569046 FAM212AQ96EL1 285 aa9.67□□□□□ -0.86
HMGB1P6-201ENST00000569046 CCDC61Q9Y6R9 512 aa9.67□□□□□ -0.86
HMGB1P6-201ENST00000569046 PAK3O75914 559 aaPredicted RBP9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 151 ms