Protein–RNA interactions for Protein: Q2Q1W2

TRIM71, E3 ubiquitin-protein ligase TRIM71, humanhuman

Known RBP Predictions only

Length 868 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM71Q2Q1W2 AL445567.2-201ENST00000618935 498 ntBASIC5.07□□□□□ -1.6
TRIM71Q2Q1W2 AC009303.2-205ENST00000627670 1091 ntTSL 5 BASIC5.07□□□□□ -1.6
TRIM71Q2Q1W2 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
TRIM71Q2Q1W2 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
TRIM71Q2Q1W2 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
TRIM71Q2Q1W2 AL731532.2-201ENST00000623542 1953 ntBASIC5.07□□□□□ -1.6
TRIM71Q2Q1W2 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
TRIM71Q2Q1W2 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
TRIM71Q2Q1W2 ST7-212ENST00000422922 1887 ntTSL 5 BASIC5.07□□□□□ -1.6
TRIM71Q2Q1W2 AC022031.1-201ENST00000585985 2593 ntBASIC5.07□□□□□ -1.6
TRIM71Q2Q1W2 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC5.06□□□□□ -1.6
TRIM71Q2Q1W2 AL355852.1-201ENST00000454081 1771 ntBASIC5.06□□□□□ -1.6
TRIM71Q2Q1W2 DAOA-211ENST00000618629 1368 ntAPPRIS P3 TSL 5 BASIC5.06□□□□□ -1.6
TRIM71Q2Q1W2 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC5.06□□□□□ -1.6
TRIM71Q2Q1W2 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC5.06□□□□□ -1.6
TRIM71Q2Q1W2 AC134882.1-201ENST00000603738 1676 ntBASIC5.06□□□□□ -1.6
TRIM71Q2Q1W2 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC5.06□□□□□ -1.6
TRIM71Q2Q1W2 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC5.06□□□□□ -1.6
TRIM71Q2Q1W2 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC5.06□□□□□ -1.6
TRIM71Q2Q1W2 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC5.06□□□□□ -1.6
TRIM71Q2Q1W2 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
TRIM71Q2Q1W2 HMGB1P5-201ENST00000255320 642 ntBASIC5.06□□□□□ -1.6
TRIM71Q2Q1W2 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC5.06□□□□□ -1.6
TRIM71Q2Q1W2 SNORD116.1-201ENST00000365628 92 ntBASIC5.06□□□□□ -1.6
TRIM71Q2Q1W2 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC5.06□□□□□ -1.6
TRIM71Q2Q1W2 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC5.06□□□□□ -1.6
TRIM71Q2Q1W2 AC009302.1-201ENST00000417147 390 ntBASIC5.06□□□□□ -1.6
TRIM71Q2Q1W2 CYCSP10-201ENST00000417973 294 ntBASIC5.06□□□□□ -1.6
TRIM71Q2Q1W2 TMBIM7P-201ENST00000418074 855 ntBASIC5.06□□□□□ -1.6
TRIM71Q2Q1W2 RGS17P1-201ENST00000423358 553 ntBASIC5.06□□□□□ -1.6
TRIM71Q2Q1W2 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC5.06□□□□□ -1.6
TRIM71Q2Q1W2 RPS26P40-201ENST00000435209 294 ntBASIC5.06□□□□□ -1.6
TRIM71Q2Q1W2 LINC00376-201ENST00000439454 693 ntTSL 5 BASIC5.06□□□□□ -1.6
TRIM71Q2Q1W2 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
TRIM71Q2Q1W2 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
TRIM71Q2Q1W2 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC5.06□□□□□ -1.6
TRIM71Q2Q1W2 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC5.06□□□□□ -1.6
TRIM71Q2Q1W2 BET1P1-201ENST00000482276 359 ntBASIC5.06□□□□□ -1.6
TRIM71Q2Q1W2 AL049874.2-201ENST00000492636 288 ntBASIC5.06□□□□□ -1.6
TRIM71Q2Q1W2 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
TRIM71Q2Q1W2 AC109471.1-201ENST00000511631 612 ntBASIC5.06□□□□□ -1.6
TRIM71Q2Q1W2 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC5.06□□□□□ -1.6
TRIM71Q2Q1W2 AC026402.1-201ENST00000513642 170 ntBASIC5.06□□□□□ -1.6
TRIM71Q2Q1W2 TCP11X3P-202ENST00000514289 1254 ntBASIC5.06□□□□□ -1.6
TRIM71Q2Q1W2 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC5.06□□□□□ -1.6
TRIM71Q2Q1W2 AP001317.1-201ENST00000531194 960 ntBASIC5.06□□□□□ -1.6
TRIM71Q2Q1W2 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
TRIM71Q2Q1W2 AC011595.3-201ENST00000546699 632 ntTSL 3 BASIC5.06□□□□□ -1.6
TRIM71Q2Q1W2 DUXAP6-201ENST00000553858 601 ntBASIC5.06□□□□□ -1.6
TRIM71Q2Q1W2 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC5.06□□□□□ -1.6
TRIM71Q2Q1W2 PCLAF-203ENST00000558008 766 ntTSL 3 BASIC5.06□□□□□ -1.6
TRIM71Q2Q1W2 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC5.06□□□□□ -1.6
TRIM71Q2Q1W2 AADACP1-206ENST00000561502 1193 ntBASIC5.06□□□□□ -1.6
TRIM71Q2Q1W2 AL020997.2-201ENST00000602607 184 ntBASIC5.06□□□□□ -1.6
TRIM71Q2Q1W2 Z99497.2-201ENST00000603634 310 ntBASIC5.06□□□□□ -1.6
TRIM71Q2Q1W2 AC091488.1-201ENST00000604239 660 ntBASIC5.06□□□□□ -1.6
TRIM71Q2Q1W2 AL390816.3-201ENST00000604527 1066 ntBASIC5.06□□□□□ -1.6
TRIM71Q2Q1W2 AC080013.3-201ENST00000606839 578 ntBASIC5.06□□□□□ -1.6
TRIM71Q2Q1W2 AC090425.2-201ENST00000608818 501 ntBASIC5.06□□□□□ -1.6
TRIM71Q2Q1W2 AC092106.3-201ENST00000611308 722 ntBASIC5.06□□□□□ -1.6
TRIM71Q2Q1W2 AC022106.2-201ENST00000620114 757 ntBASIC5.06□□□□□ -1.6
TRIM71Q2Q1W2 GPR34-203ENST00000620846 1282 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
TRIM71Q2Q1W2 AP000843.1-201ENST00000624880 701 ntBASIC5.06□□□□□ -1.6
TRIM71Q2Q1W2 AC017037.3-201ENST00000625016 472 ntBASIC5.06□□□□□ -1.6
TRIM71Q2Q1W2 AF001550.2-201ENST00000636643 217 ntBASIC5.06□□□□□ -1.6
TRIM71Q2Q1W2 AC108467.2-201ENST00000617640 1597 ntBASIC5.06□□□□□ -1.6
TRIM71Q2Q1W2 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
TRIM71Q2Q1W2 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC5.06□□□□□ -1.6
TRIM71Q2Q1W2 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
TRIM71Q2Q1W2 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC5.06□□□□□ -1.6
TRIM71Q2Q1W2 AC135352.1-201ENST00000506173 1418 ntBASIC5.06□□□□□ -1.6
TRIM71Q2Q1W2 NRK-204ENST00000540278 1687 ntTSL 2 BASIC5.05□□□□□ -1.6
TRIM71Q2Q1W2 ADAM5-202ENST00000399789 1942 ntBASIC5.05□□□□□ -1.6
TRIM71Q2Q1W2 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
TRIM71Q2Q1W2 DDX43P2-201ENST00000604753 1354 ntBASIC5.05□□□□□ -1.6
TRIM71Q2Q1W2 ECM2-202ENST00000375540 1606 ntTSL 2 BASIC5.05□□□□□ -1.6
TRIM71Q2Q1W2 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC5.05□□□□□ -1.6
TRIM71Q2Q1W2 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC5.05□□□□□ -1.6
TRIM71Q2Q1W2 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
TRIM71Q2Q1W2 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
TRIM71Q2Q1W2 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC5.05□□□□□ -1.6
TRIM71Q2Q1W2 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
TRIM71Q2Q1W2 AC008549.2-201ENST00000333482 706 ntBASIC5.05□□□□□ -1.6
TRIM71Q2Q1W2 RNA5SP28-201ENST00000363841 119 ntBASIC5.05□□□□□ -1.6
TRIM71Q2Q1W2 RNU6-707P-201ENST00000364647 95 ntBASIC5.05□□□□□ -1.6
TRIM71Q2Q1W2 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
TRIM71Q2Q1W2 SDHCP2-201ENST00000398565 501 ntBASIC5.05□□□□□ -1.6
TRIM71Q2Q1W2 ERHP2-201ENST00000402323 299 ntBASIC5.05□□□□□ -1.6
TRIM71Q2Q1W2 Z98745.1-201ENST00000402553 494 ntBASIC5.05□□□□□ -1.6
TRIM71Q2Q1W2 RN7SKP182-201ENST00000410772 298 ntBASIC5.05□□□□□ -1.6
TRIM71Q2Q1W2 AC073136.2-201ENST00000417282 849 ntBASIC5.05□□□□□ -1.6
TRIM71Q2Q1W2 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC5.05□□□□□ -1.6
TRIM71Q2Q1W2 RPL21P43-201ENST00000425440 472 ntBASIC5.05□□□□□ -1.6
TRIM71Q2Q1W2 DPRXP1-201ENST00000426312 460 ntBASIC5.05□□□□□ -1.6
TRIM71Q2Q1W2 LINC01400-201ENST00000426358 947 ntTSL 3 BASIC5.05□□□□□ -1.6
TRIM71Q2Q1W2 RPS27AP12-201ENST00000429552 465 ntBASIC5.05□□□□□ -1.6
TRIM71Q2Q1W2 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC5.05□□□□□ -1.6
TRIM71Q2Q1W2 AL451140.1-201ENST00000430534 371 ntTSL 3 BASIC5.05□□□□□ -1.6
TRIM71Q2Q1W2 RPL35AP21-201ENST00000437667 333 ntBASIC5.05□□□□□ -1.6
TRIM71Q2Q1W2 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC5.05□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 255 ms