Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 MRPS18CP6-201ENST00000423587 223 ntBASIC7.22□□□□□ -1.25
LRCH3Q96II8 AL513304.1-201ENST00000432987 359 ntTSL 3 BASIC7.22□□□□□ -1.25
LRCH3Q96II8 LINC00570-203ENST00000437795 490 ntTSL 3 BASIC7.22□□□□□ -1.25
LRCH3Q96II8 AC022498.1-201ENST00000449845 696 ntTSL 3 BASIC7.22□□□□□ -1.25
LRCH3Q96II8 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
LRCH3Q96II8 OARD1-207ENST00000468811 819 ntAPPRIS P1 TSL 2 BASIC7.22□□□□□ -1.25
LRCH3Q96II8 AC245088.1-201ENST00000486508 384 ntTSL 3 BASIC7.22□□□□□ -1.25
LRCH3Q96II8 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC7.22□□□□□ -1.25
LRCH3Q96II8 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC7.22□□□□□ -1.25
LRCH3Q96II8 RN7SKP283-201ENST00000517197 270 ntBASIC7.22□□□□□ -1.25
LRCH3Q96II8 AC090458.1-202ENST00000530387 462 ntTSL 5 BASIC7.22□□□□□ -1.25
LRCH3Q96II8 PSMA6-214ENST00000556506 763 ntTSL 5 BASIC7.22□□□□□ -1.25
LRCH3Q96II8 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC7.22□□□□□ -1.25
LRCH3Q96II8 LARP7P2-201ENST00000575306 125 ntBASIC7.22□□□□□ -1.25
LRCH3Q96II8 AC010620.2-201ENST00000600135 313 ntBASIC7.22□□□□□ -1.25
LRCH3Q96II8 RN7SL787P-201ENST00000613000 284 ntBASIC7.22□□□□□ -1.25
LRCH3Q96II8 DRG1-207ENST00000629688 309 ntTSL 5 BASIC7.22□□□□□ -1.25
LRCH3Q96II8 PDGFC-203ENST00000502773 4165 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
LRCH3Q96II8 ZNF426-201ENST00000253115 7085 ntAPPRIS P3 TSL 1 (best) BASIC7.22□□□□□ -1.25
LRCH3Q96II8 HSD17B4-202ENST00000414835 2551 ntTSL 2 BASIC7.22□□□□□ -1.25
LRCH3Q96II8 SLC4A10-201ENST00000272716 3414 ntTSL 5 BASIC7.22□□□□□ -1.25
LRCH3Q96II8 HBS1L-206ENST00000415177 2636 ntTSL 5 BASIC7.22□□□□□ -1.25
LRCH3Q96II8 AC034111.1-201ENST00000562143 3770 ntBASIC7.22□□□□□ -1.25
LRCH3Q96II8 GON4L-204ENST00000437809 7713 ntAPPRIS P3 TSL 5 BASIC7.22□□□□□ -1.25
LRCH3Q96II8 ITPR1-205ENST00000456211 9717 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
LRCH3Q96II8 SUPT20H-224ENST00000542180 2478 ntAPPRIS ALT2 TSL 5 BASIC7.22□□□□□ -1.25
LRCH3Q96II8 PHKB-201ENST00000299167 5464 ntTSL 5 BASIC7.22□□□□□ -1.25
LRCH3Q96II8 LMO7-202ENST00000341547 7237 ntAPPRIS P3 TSL 1 (best) BASIC7.22□□□□□ -1.25
LRCH3Q96II8 TRIM6-TRIM34-201ENST00000354852 3391 ntAPPRIS P1 TSL 2 BASIC7.22□□□□□ -1.25
LRCH3Q96II8 OR2J2-203ENST00000641417 2392 ntAPPRIS P1 BASIC7.22□□□□□ -1.25
LRCH3Q96II8 GRIK1-202ENST00000389124 2712 ntTSL 5 BASIC7.21□□□□□ -1.25
LRCH3Q96II8 SPATA31A1-201ENST00000377647 4256 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.25
LRCH3Q96II8 SPATA31A7-206ENST00000619167 4256 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.25
LRCH3Q96II8 PIGA-206ENST00000542278 3626 ntAPPRIS P1 TSL 5 BASIC7.21□□□□□ -1.25
LRCH3Q96II8 RBM25-201ENST00000261973 6910 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.25
LRCH3Q96II8 VTCN1-201ENST00000328189 2289 ntTSL 5 BASIC7.21□□□□□ -1.25
LRCH3Q96II8 AC003973.3-201ENST00000624863 2822 ntBASIC7.21□□□□□ -1.25
LRCH3Q96II8 DHX40P1-201ENST00000588725 1412 ntBASIC7.21□□□□□ -1.25
LRCH3Q96II8 RGPD3-201ENST00000304514 5510 ntAPPRIS ALT2 TSL 2 BASIC7.21□□□□□ -1.25
LRCH3Q96II8 EGFEM1P-205ENST00000483846 2327 ntTSL 5 BASIC7.21□□□□□ -1.26
LRCH3Q96II8 ZNF83-205ENST00000594682 2890 ntTSL 4 BASIC7.21□□□□□ -1.26
LRCH3Q96II8 RBBP4-202ENST00000373493 7943 ntAPPRIS P3 TSL 1 (best) BASIC7.21□□□□□ -1.26
LRCH3Q96II8 MUC4-209ENST00000463781 17110 ntAPPRIS ALT2 TSL 5 BASIC7.21□□□□□ -1.26
LRCH3Q96II8 PAK5-201ENST00000353224 4500 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
LRCH3Q96II8 PPIAP22-201ENST00000358455 498 ntBASIC7.21□□□□□ -1.26
LRCH3Q96II8 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC7.21□□□□□ -1.26
LRCH3Q96II8 RNU6-984P-201ENST00000363236 109 ntBASIC7.21□□□□□ -1.26
LRCH3Q96II8 Y_RNA.416-201ENST00000384014 113 ntBASIC7.21□□□□□ -1.26
LRCH3Q96II8 RNU6-190P-201ENST00000384154 102 ntBASIC7.21□□□□□ -1.26
LRCH3Q96II8 MIR130B-202ENST00000385018 82 ntBASIC7.21□□□□□ -1.26
LRCH3Q96II8 ARF4P3-201ENST00000397387 509 ntBASIC7.21□□□□□ -1.26
LRCH3Q96II8 BX284632.2-201ENST00000421091 399 ntBASIC7.21□□□□□ -1.26
LRCH3Q96II8 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC7.21□□□□□ -1.26
LRCH3Q96II8 MED13P1-201ENST00000428342 171 ntBASIC7.21□□□□□ -1.26
LRCH3Q96II8 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC7.21□□□□□ -1.26
LRCH3Q96II8 AL359955.2-201ENST00000445380 353 ntBASIC7.21□□□□□ -1.26
LRCH3Q96II8 AC073850.1-201ENST00000449243 255 ntBASIC7.21□□□□□ -1.26
LRCH3Q96II8 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC7.21□□□□□ -1.26
LRCH3Q96II8 RPL12P30-201ENST00000488389 499 ntBASIC7.21□□□□□ -1.26
LRCH3Q96II8 AC055855.1-201ENST00000489563 579 ntBASIC7.21□□□□□ -1.26
LRCH3Q96II8 RPL23AP72-201ENST00000492447 435 ntBASIC7.21□□□□□ -1.26
LRCH3Q96II8 AC090453.1-201ENST00000495560 436 ntBASIC7.21□□□□□ -1.26
LRCH3Q96II8 AL390198.2-201ENST00000510553 222 ntBASIC7.21□□□□□ -1.26
LRCH3Q96II8 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC7.21□□□□□ -1.26
LRCH3Q96II8 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC7.21□□□□□ -1.26
LRCH3Q96II8 OR11H5P-201ENST00000554039 926 ntBASIC7.21□□□□□ -1.26
LRCH3Q96II8 LINC01580-201ENST00000555255 561 ntTSL 4 BASIC7.21□□□□□ -1.26
LRCH3Q96II8 AC020914.7-201ENST00000594477 545 ntBASIC7.21□□□□□ -1.26
LRCH3Q96II8 LAPTM4BP2-201ENST00000604542 446 ntBASIC7.21□□□□□ -1.26
LRCH3Q96II8 AP001264.1-201ENST00000620602 703 ntBASIC7.21□□□□□ -1.26
LRCH3Q96II8 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC7.21□□□□□ -1.26
LRCH3Q96II8 EXD1-201ENST00000314992 2942 ntAPPRIS P3 TSL 1 (best) BASIC7.21□□□□□ -1.26
LRCH3Q96II8 FZD3-204ENST00000537916 13740 ntAPPRIS P1 TSL 2 BASIC7.21□□□□□ -1.26
LRCH3Q96II8 ZNF33A-204ENST00000458705 6084 ntAPPRIS P3 TSL 1 (best) BASIC7.21□□□□□ -1.26
LRCH3Q96II8 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC7.21□□□□□ -1.26
LRCH3Q96II8 AKAP13-203ENST00000394518 13215 ntAPPRIS ALT2 TSL 1 (best) BASIC7.21□□□□□ -1.26
LRCH3Q96II8 LCP1-202ENST00000398576 3944 ntAPPRIS P1 TSL 5 BASIC7.21□□□□□ -1.26
LRCH3Q96II8 UTY-213ENST00000612274 6586 ntAPPRIS ALT2 TSL 1 (best) BASIC7.21□□□□□ -1.26
LRCH3Q96II8 ECT2L-203ENST00000423192 4319 ntAPPRIS P1 TSL 5 BASIC7.21□□□□□ -1.26
LRCH3Q96II8 TP63-207ENST00000418709 2810 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
LRCH3Q96II8 LINC01772-201ENST00000457898 3245 ntTSL 2 BASIC7.21□□□□□ -1.26
LRCH3Q96II8 MCM8-201ENST00000265187 3442 ntAPPRIS ALT2 TSL 1 (best) BASIC7.21□□□□□ -1.26
LRCH3Q96II8 AL121949.2-201ENST00000403446 1548 ntBASIC7.21□□□□□ -1.26
LRCH3Q96II8 EIF4G2-208ENST00000526148 4001 ntAPPRIS ALT2 TSL 1 (best) BASIC7.21□□□□□ -1.26
LRCH3Q96II8 MAPK10-251ENST00000640858 3052 ntTSL 5 BASIC7.21□□□□□ -1.26
LRCH3Q96II8 NBPF19-206ENST00000621744 14425 ntTSL 5 BASIC7.21□□□□□ -1.26
LRCH3Q96II8 ZNF292-202ENST00000369577 10610 ntAPPRIS P2 TSL 1 (best) BASIC7.21□□□□□ -1.26
LRCH3Q96II8 LINC00922-203ENST00000569736 1760 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
LRCH3Q96II8 WDR89-202ENST00000394942 2993 ntAPPRIS P1 TSL 5 BASIC7.2□□□□□ -1.26
LRCH3Q96II8 INPP5F-208ENST00000637174 3168 ntTSL 5 BASIC7.2□□□□□ -1.26
LRCH3Q96II8 MOCS2-201ENST00000361377 3568 ntTSL 4 BASIC7.2□□□□□ -1.26
LRCH3Q96II8 ZNF484-204ENST00000395506 4031 ntTSL 3 BASIC7.2□□□□□ -1.26
LRCH3Q96II8 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
LRCH3Q96II8 ENSA-201ENST00000271690 2818 ntAPPRIS ALT1 TSL 1 (best) BASIC7.2□□□□□ -1.26
LRCH3Q96II8 FAM240A-201ENST00000444264 1826 ntAPPRIS P2 TSL 2 BASIC7.2□□□□□ -1.26
LRCH3Q96II8 FAM240A-202ENST00000640551 1826 ntAPPRIS ALT2 TSL 2 BASIC7.2□□□□□ -1.26
LRCH3Q96II8 SYTL5-202ENST00000456733 4704 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
LRCH3Q96II8 HP1BP3-201ENST00000312239 3938 ntAPPRIS P1 TSL 2 BASIC7.2□□□□□ -1.26
LRCH3Q96II8 OR2T2-203ENST00000642130 3331 ntAPPRIS P1 BASIC7.2□□□□□ -1.26
LRCH3Q96II8 MAPK10-380ENST00000642015 3137 ntAPPRIS P2 BASIC7.2□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 89.3 ms