Protein–RNA interactions for Protein: P35251

RFC1, Replication factor C subunit 1, humanhuman

Predicted RBP Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1P35251 TBCA-203ENST00000517679 545 ntTSL 3 BASIC4.71□□□□□ -1.66
RFC1P35251 AC087379.1-201ENST00000524613 993 ntTSL 5 BASIC4.71□□□□□ -1.66
RFC1P35251 AC087783.1-201ENST00000527135 564 ntTSL 4 BASIC4.71□□□□□ -1.66
RFC1P35251 AC124293.1-201ENST00000530034 493 ntBASIC4.71□□□□□ -1.66
RFC1P35251 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC4.71□□□□□ -1.66
RFC1P35251 AC063949.1-201ENST00000552900 865 ntBASIC4.71□□□□□ -1.66
RFC1P35251 FRMD6-AS2-202ENST00000557625 581 ntTSL 4 BASIC4.71□□□□□ -1.66
RFC1P35251 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
RFC1P35251 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC4.71□□□□□ -1.66
RFC1P35251 AC011477.5-201ENST00000586571 259 ntBASIC4.71□□□□□ -1.66
RFC1P35251 CERS6-AS1-204ENST00000599361 536 ntTSL 4 BASIC4.71□□□□□ -1.66
RFC1P35251 DUXAP3-201ENST00000603616 594 ntBASIC4.71□□□□□ -1.66
RFC1P35251 AC116651.1-201ENST00000609724 556 ntBASIC4.71□□□□□ -1.66
RFC1P35251 AL353726.1-201ENST00000614041 1000 ntBASIC4.71□□□□□ -1.66
RFC1P35251 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC4.71□□□□□ -1.66
RFC1P35251 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
RFC1P35251 AP002782.1-201ENST00000623107 614 ntBASIC4.71□□□□□ -1.66
RFC1P35251 LGI1-209ENST00000627699 664 ntTSL 3 BASIC4.71□□□□□ -1.66
RFC1P35251 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC4.71□□□□□ -1.66
RFC1P35251 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC4.71□□□□□ -1.66
RFC1P35251 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
RFC1P35251 USP9YP4-201ENST00000424401 1745 ntBASIC4.71□□□□□ -1.66
RFC1P35251 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC4.71□□□□□ -1.66
RFC1P35251 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.66
RFC1P35251 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
RFC1P35251 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC4.71□□□□□ -1.66
RFC1P35251 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
RFC1P35251 DHX40P1-201ENST00000588725 1412 ntBASIC4.71□□□□□ -1.66
RFC1P35251 DLD-204ENST00000437604 1859 ntTSL 2 BASIC4.71□□□□□ -1.66
RFC1P35251 PSMD6-202ENST00000394431 1349 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
RFC1P35251 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC4.71□□□□□ -1.66
RFC1P35251 AL592182.3-201ENST00000642132 3304 ntBASIC4.71□□□□□ -1.66
RFC1P35251 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
RFC1P35251 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC4.7□□□□□ -1.66
RFC1P35251 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
RFC1P35251 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.7□□□□□ -1.66
RFC1P35251 SNRPB2-202ENST00000377943 1588 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
RFC1P35251 MTCO1P6-201ENST00000481192 1384 ntBASIC4.7□□□□□ -1.66
RFC1P35251 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC4.7□□□□□ -1.66
RFC1P35251 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC4.7□□□□□ -1.66
RFC1P35251 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
RFC1P35251 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
RFC1P35251 RNU6-1339P-201ENST00000363574 91 ntBASIC4.7□□□□□ -1.66
RFC1P35251 RNU4-40P-201ENST00000364351 143 ntBASIC4.7□□□□□ -1.66
RFC1P35251 RNY3P9-201ENST00000384727 106 ntBASIC4.7□□□□□ -1.66
RFC1P35251 RNU6-575P-201ENST00000411326 105 ntBASIC4.7□□□□□ -1.66
RFC1P35251 CEACAMP8-201ENST00000413902 580 ntBASIC4.7□□□□□ -1.66
RFC1P35251 AL008987.1-201ENST00000415528 237 ntBASIC4.7□□□□□ -1.66
RFC1P35251 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
RFC1P35251 AL590139.1-201ENST00000416267 400 ntBASIC4.7□□□□□ -1.66
RFC1P35251 Z75741.2-201ENST00000417272 1167 ntBASIC4.7□□□□□ -1.66
RFC1P35251 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC4.7□□□□□ -1.66
RFC1P35251 AC062016.2-201ENST00000420950 676 ntBASIC4.7□□□□□ -1.66
RFC1P35251 LINC00266-4P-201ENST00000427373 842 ntTSL 3 BASIC4.7□□□□□ -1.66
RFC1P35251 HIGD1AP4-201ENST00000430194 280 ntBASIC4.7□□□□□ -1.66
RFC1P35251 AC234064.1-201ENST00000436312 247 ntBASIC4.7□□□□□ -1.66
RFC1P35251 LIX1L-AS1-205ENST00000437797 536 ntTSL 3 BASIC4.7□□□□□ -1.66
RFC1P35251 AC011753.3-201ENST00000443436 406 ntBASIC4.7□□□□□ -1.66
RFC1P35251 RPL7P31-201ENST00000450192 724 ntBASIC4.7□□□□□ -1.66
RFC1P35251 SBDSP1-204ENST00000453858 737 ntBASIC4.7□□□□□ -1.66
RFC1P35251 AC069528.1-202ENST00000482888 637 ntBASIC4.7□□□□□ -1.66
RFC1P35251 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC4.7□□□□□ -1.66
RFC1P35251 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC4.7□□□□□ -1.66
RFC1P35251 AC021146.3-201ENST00000511911 260 ntBASIC4.7□□□□□ -1.66
RFC1P35251 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC4.7□□□□□ -1.66
RFC1P35251 RNU6-416P-201ENST00000516265 103 ntBASIC4.7□□□□□ -1.66
RFC1P35251 HMGB1P23-201ENST00000518743 568 ntBASIC4.7□□□□□ -1.66
RFC1P35251 AC025437.3-201ENST00000523178 771 ntTSL 5 BASIC4.7□□□□□ -1.66
RFC1P35251 TEX12-202ENST00000530752 787 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
RFC1P35251 GSTP1P1-201ENST00000548078 319 ntBASIC4.7□□□□□ -1.66
RFC1P35251 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC4.7□□□□□ -1.66
RFC1P35251 AC115085.1-201ENST00000588924 229 ntBASIC4.7□□□□□ -1.66
RFC1P35251 BNIP3P24-201ENST00000593398 557 ntBASIC4.7□□□□□ -1.66
RFC1P35251 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC4.7□□□□□ -1.66
RFC1P35251 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC4.7□□□□□ -1.66
RFC1P35251 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC4.7□□□□□ -1.66
RFC1P35251 AC020634.1-201ENST00000608701 549 ntBASIC4.7□□□□□ -1.66
RFC1P35251 AC024257.5-201ENST00000612739 531 ntBASIC4.7□□□□□ -1.66
RFC1P35251 AC093783.1-201ENST00000612976 329 ntBASIC4.7□□□□□ -1.66
RFC1P35251 AL133243.1-201ENST00000614487 366 ntBASIC4.7□□□□□ -1.66
RFC1P35251 MIR6891-201ENST00000618788 93 ntBASIC4.7□□□□□ -1.66
RFC1P35251 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC4.7□□□□□ -1.66
RFC1P35251 AC017037.3-201ENST00000625016 472 ntBASIC4.7□□□□□ -1.66
RFC1P35251 AL049536.1-201ENST00000625043 744 ntBASIC4.7□□□□□ -1.66
RFC1P35251 AC092162.3-201ENST00000624511 1624 ntBASIC4.7□□□□□ -1.66
RFC1P35251 AC000367.1-201ENST00000452711 1766 ntBASIC4.7□□□□□ -1.66
RFC1P35251 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
RFC1P35251 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
RFC1P35251 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
RFC1P35251 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
RFC1P35251 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC4.69□□□□□ -1.66
RFC1P35251 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC4.69□□□□□ -1.66
RFC1P35251 RNU6-1214P-201ENST00000363650 109 ntBASIC4.69□□□□□ -1.66
RFC1P35251 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC4.69□□□□□ -1.66
RFC1P35251 SRY-201ENST00000383070 845 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
RFC1P35251 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
RFC1P35251 MIR937-201ENST00000401271 86 ntBASIC4.69□□□□□ -1.66
RFC1P35251 AL049545.1-201ENST00000401856 572 ntBASIC4.69□□□□□ -1.66
RFC1P35251 RNU6-77P-201ENST00000410554 91 ntBASIC4.69□□□□□ -1.66
RFC1P35251 RNA5SP146-201ENST00000410743 123 ntBASIC4.69□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 84.1 ms