Protein–RNA interactions for Protein: P13765

HLA-DOB, HLA class II histocompatibility antigen, DO beta chain, humanhuman

Predictions only

Length 273 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOBP13765 Z98745.1-201ENST00000402553 494 ntBASIC4.09□□□□□ -1.75
HLA-DOBP13765 FAM26D-203ENST00000405399 1165 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
HLA-DOBP13765 MIR1302-8-201ENST00000408342 128 ntBASIC4.09□□□□□ -1.75
HLA-DOBP13765 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC4.09□□□□□ -1.75
HLA-DOBP13765 GNG12-AS1-202ENST00000414904 796 ntTSL 3 BASIC4.09□□□□□ -1.75
HLA-DOBP13765 AC234782.4-201ENST00000417646 1048 ntBASIC4.09□□□□□ -1.75
HLA-DOBP13765 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC4.09□□□□□ -1.75
HLA-DOBP13765 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC4.09□□□□□ -1.75
HLA-DOBP13765 OFD1P2Y-201ENST00000421895 1149 ntBASIC4.09□□□□□ -1.75
HLA-DOBP13765 AC234781.2-201ENST00000426370 994 ntBASIC4.09□□□□□ -1.75
HLA-DOBP13765 Z93242.1-201ENST00000427102 353 ntBASIC4.09□□□□□ -1.75
HLA-DOBP13765 BRWD1P3-201ENST00000428816 390 ntBASIC4.09□□□□□ -1.75
HLA-DOBP13765 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC4.09□□□□□ -1.75
HLA-DOBP13765 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC4.09□□□□□ -1.75
HLA-DOBP13765 AC005345.1-201ENST00000431868 217 ntBASIC4.09□□□□□ -1.75
HLA-DOBP13765 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC4.09□□□□□ -1.75
HLA-DOBP13765 AL049745.1-201ENST00000433953 286 ntBASIC4.09□□□□□ -1.75
HLA-DOBP13765 AL354941.1-201ENST00000438600 464 ntBASIC4.09□□□□□ -1.75
HLA-DOBP13765 AL359378.1-201ENST00000439891 400 ntTSL 5 BASIC4.09□□□□□ -1.75
HLA-DOBP13765 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC4.09□□□□□ -1.75
HLA-DOBP13765 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC4.09□□□□□ -1.75
HLA-DOBP13765 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC4.09□□□□□ -1.75
HLA-DOBP13765 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC4.09□□□□□ -1.75
HLA-DOBP13765 RSL24D1P3-201ENST00000449255 495 ntBASIC4.09□□□□□ -1.75
HLA-DOBP13765 ZNF736P5Y-201ENST00000451173 805 ntBASIC4.09□□□□□ -1.75
HLA-DOBP13765 LINC01767-201ENST00000451914 545 ntTSL 2 BASIC4.09□□□□□ -1.75
HLA-DOBP13765 AL645937.3-201ENST00000453647 936 ntBASIC4.09□□□□□ -1.75
HLA-DOBP13765 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC4.09□□□□□ -1.75
HLA-DOBP13765 RNU6-1218P-201ENST00000458990 108 ntBASIC4.09□□□□□ -1.75
HLA-DOBP13765 LINC02050-201ENST00000473938 712 ntTSL 3 BASIC4.09□□□□□ -1.75
HLA-DOBP13765 RPL7P18-201ENST00000478965 734 ntBASIC4.09□□□□□ -1.75
HLA-DOBP13765 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC4.09□□□□□ -1.75
HLA-DOBP13765 LINC00888-204ENST00000487386 421 ntBASIC4.09□□□□□ -1.75
HLA-DOBP13765 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC4.09□□□□□ -1.75
HLA-DOBP13765 AC048346.1-201ENST00000510247 144 ntBASIC4.09□□□□□ -1.75
HLA-DOBP13765 CDV3-208ENST00000511392 554 ntTSL 5 BASIC4.09□□□□□ -1.75
HLA-DOBP13765 OR5BM1P-201ENST00000512021 366 ntBASIC4.09□□□□□ -1.75
HLA-DOBP13765 AL671862.1-201ENST00000515851 349 ntBASIC4.09□□□□□ -1.75
HLA-DOBP13765 RNA5SP446-201ENST00000515955 82 ntBASIC4.09□□□□□ -1.75
HLA-DOBP13765 AC087855.1-201ENST00000518178 430 ntTSL 3 BASIC4.09□□□□□ -1.75
HLA-DOBP13765 CARD16-203ENST00000525374 503 ntTSL 3 BASIC4.09□□□□□ -1.75
HLA-DOBP13765 AP002765.2-201ENST00000532961 666 ntTSL 3 BASIC4.09□□□□□ -1.75
HLA-DOBP13765 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
HLA-DOBP13765 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC4.09□□□□□ -1.75
HLA-DOBP13765 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC4.09□□□□□ -1.75
HLA-DOBP13765 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC4.09□□□□□ -1.75
HLA-DOBP13765 AC007496.1-201ENST00000565641 739 ntTSL 3 BASIC4.09□□□□□ -1.75
HLA-DOBP13765 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC4.09□□□□□ -1.75
HLA-DOBP13765 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC4.09□□□□□ -1.75
HLA-DOBP13765 TTN-AS1-237ENST00000590743 812 ntTSL 5 BASIC4.09□□□□□ -1.75
HLA-DOBP13765 AC110760.3-201ENST00000598794 467 ntBASIC4.09□□□□□ -1.75
HLA-DOBP13765 AL137072.1-201ENST00000603444 466 ntBASIC4.09□□□□□ -1.75
HLA-DOBP13765 AC106791.2-201ENST00000604680 391 ntBASIC4.09□□□□□ -1.75
HLA-DOBP13765 AC096553.1-201ENST00000605169 829 ntBASIC4.09□□□□□ -1.75
HLA-DOBP13765 AL451064.1-201ENST00000607718 471 ntBASIC4.09□□□□□ -1.75
HLA-DOBP13765 Mico1.1-201ENST00000611698 204 ntBASIC4.09□□□□□ -1.75
HLA-DOBP13765 AL049539.1-201ENST00000611964 459 ntBASIC4.09□□□□□ -1.75
HLA-DOBP13765 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC4.09□□□□□ -1.75
HLA-DOBP13765 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC4.09□□□□□ -1.75
HLA-DOBP13765 AP001784.1-201ENST00000624107 428 ntBASIC4.09□□□□□ -1.75
HLA-DOBP13765 AC074387.1-201ENST00000632044 823 ntTSL 2 BASIC4.09□□□□□ -1.75
HLA-DOBP13765 AC068620.4-201ENST00000636730 1182 ntBASIC4.09□□□□□ -1.75
HLA-DOBP13765 AC108751.5-201ENST00000492880 1336 ntBASIC4.09□□□□□ -1.75
HLA-DOBP13765 DCAF13P3-201ENST00000561147 1334 ntBASIC4.09□□□□□ -1.75
HLA-DOBP13765 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC4.09□□□□□ -1.75
HLA-DOBP13765 AC053481.2-202ENST00000582394 1500 ntBASIC4.09□□□□□ -1.75
HLA-DOBP13765 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
HLA-DOBP13765 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC4.09□□□□□ -1.76
HLA-DOBP13765 ZNF137P-201ENST00000456718 1920 ntBASIC4.09□□□□□ -1.76
HLA-DOBP13765 AC092435.4-201ENST00000623012 4159 ntBASIC4.09□□□□□ -1.76
HLA-DOBP13765 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC4.09□□□□□ -1.76
HLA-DOBP13765 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
HLA-DOBP13765 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC4.08□□□□□ -1.76
HLA-DOBP13765 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.08□□□□□ -1.76
HLA-DOBP13765 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC4.08□□□□□ -1.76
HLA-DOBP13765 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
HLA-DOBP13765 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC4.08□□□□□ -1.76
HLA-DOBP13765 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC4.08□□□□□ -1.76
HLA-DOBP13765 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
HLA-DOBP13765 BMS1P3-201ENST00000372011 932 ntBASIC4.08□□□□□ -1.76
HLA-DOBP13765 SLC10A5P1-201ENST00000379063 1306 ntBASIC4.08□□□□□ -1.76
HLA-DOBP13765 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
HLA-DOBP13765 SNORD116-1-201ENST00000384335 95 ntBASIC4.08□□□□□ -1.76
HLA-DOBP13765 MIR659-201ENST00000384963 97 ntBASIC4.08□□□□□ -1.76
HLA-DOBP13765 AL161909.1-201ENST00000397390 712 ntBASIC4.08□□□□□ -1.76
HLA-DOBP13765 MIR298-201ENST00000401212 88 ntBASIC4.08□□□□□ -1.76
HLA-DOBP13765 GSTM3P2-201ENST00000412746 530 ntBASIC4.08□□□□□ -1.76
HLA-DOBP13765 AL450992.3-201ENST00000413192 568 ntBASIC4.08□□□□□ -1.76
HLA-DOBP13765 AL158166.2-201ENST00000420845 748 ntTSL 2 BASIC4.08□□□□□ -1.76
HLA-DOBP13765 AC011233.1-201ENST00000422812 283 ntBASIC4.08□□□□□ -1.76
HLA-DOBP13765 RPL21P91-201ENST00000429231 479 ntBASIC4.08□□□□□ -1.76
HLA-DOBP13765 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC4.08□□□□□ -1.76
HLA-DOBP13765 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC4.08□□□□□ -1.76
HLA-DOBP13765 LYPLA1P1-201ENST00000434514 622 ntBASIC4.08□□□□□ -1.76
HLA-DOBP13765 PPIAP13-201ENST00000434706 478 ntBASIC4.08□□□□□ -1.76
HLA-DOBP13765 MTND4P32-201ENST00000437189 1237 ntBASIC4.08□□□□□ -1.76
HLA-DOBP13765 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC4.08□□□□□ -1.76
HLA-DOBP13765 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC4.08□□□□□ -1.76
HLA-DOBP13765 AC093155.1-201ENST00000440164 826 ntBASIC4.08□□□□□ -1.76
HLA-DOBP13765 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 89.7 ms