Protein–RNA interactions for Protein: Q9UPM6

LHX6, LIM/homeobox protein Lhx6, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX6Q9UPM6 WDR19-207ENST00000506503 2513 ntTSL 2 BASIC7.03□□□□□ -1.28
LHX6Q9UPM6 MAPK10-347ENST00000641762 2856 ntBASIC7.03□□□□□ -1.28
LHX6Q9UPM6 FLJ42393-201ENST00000623801 2270 ntBASIC7.03□□□□□ -1.28
LHX6Q9UPM6 PTER-203ENST00000423462 3212 ntTSL 3 BASIC7.03□□□□□ -1.28
LHX6Q9UPM6 AC009237.3-203ENST00000442128 3551 ntBASIC7.03□□□□□ -1.28
LHX6Q9UPM6 ZNF567-204ENST00000588311 2042 ntTSL 2 BASIC7.03□□□□□ -1.28
LHX6Q9UPM6 NBPF12-203ENST00000611443 5594 ntTSL 5 BASIC7.03□□□□□ -1.28
LHX6Q9UPM6 PEX19-201ENST00000368072 3661 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
LHX6Q9UPM6 NEDD1-201ENST00000266742 4046 ntAPPRIS P1 TSL 2 BASIC7.03□□□□□ -1.28
LHX6Q9UPM6 CCDC66-203ENST00000394672 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC7.03□□□□□ -1.28
LHX6Q9UPM6 SLC35E3-202ENST00000398004 17791 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
LHX6Q9UPM6 APP-209ENST00000440126 2846 ntTSL 2 BASIC7.03□□□□□ -1.28
LHX6Q9UPM6 SLC12A6-201ENST00000290209 7286 ntAPPRIS P3 TSL 1 (best) BASIC7.03□□□□□ -1.28
LHX6Q9UPM6 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC7.03□□□□□ -1.28
LHX6Q9UPM6 HDAC9-218ENST00000456174 2307 ntTSL 2 BASIC7.03□□□□□ -1.28
LHX6Q9UPM6 PRIM2-207ENST00000615550 2308 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
LHX6Q9UPM6 Y_RNA.441-201ENST00000384123 112 ntBASIC7.03□□□□□ -1.28
LHX6Q9UPM6 TRAV8-3-201ENST00000390435 341 ntAPPRIS P1 BASIC7.03□□□□□ -1.28
LHX6Q9UPM6 Y_RNA.580-201ENST00000391004 95 ntBASIC7.03□□□□□ -1.28
LHX6Q9UPM6 AC114752.2-201ENST00000424119 404 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
LHX6Q9UPM6 AC083855.1-201ENST00000440041 258 ntBASIC7.03□□□□□ -1.28
LHX6Q9UPM6 MIR4435-2HG-209ENST00000441075 704 ntTSL 5 BASIC7.03□□□□□ -1.28
LHX6Q9UPM6 DBIL5P2-201ENST00000443827 253 ntBASIC7.03□□□□□ -1.28
LHX6Q9UPM6 AC026826.1-201ENST00000493002 361 ntBASIC7.03□□□□□ -1.28
LHX6Q9UPM6 RPS17P5-201ENST00000498293 408 ntBASIC7.03□□□□□ -1.28
LHX6Q9UPM6 AC074250.1-201ENST00000511117 192 ntBASIC7.03□□□□□ -1.28
LHX6Q9UPM6 AC034238.3-201ENST00000512349 591 ntTSL 4 BASIC7.03□□□□□ -1.28
LHX6Q9UPM6 SCARNA18.2-201ENST00000516882 84 ntBASIC7.03□□□□□ -1.28
LHX6Q9UPM6 RNU6-798P-201ENST00000516912 103 ntBASIC7.03□□□□□ -1.28
LHX6Q9UPM6 RNA5SP170-201ENST00000517150 101 ntBASIC7.03□□□□□ -1.28
LHX6Q9UPM6 AC010809.1-201ENST00000560268 562 ntTSL 3 BASIC7.03□□□□□ -1.28
LHX6Q9UPM6 PDE6G-203ENST00000571224 526 ntAPPRIS P1 TSL 5 BASIC7.03□□□□□ -1.28
LHX6Q9UPM6 MIR212-201ENST00000586026 110 ntBASIC7.03□□□□□ -1.28
LHX6Q9UPM6 AC004852.1-201ENST00000605206 154 ntBASIC7.03□□□□□ -1.28
LHX6Q9UPM6 7SK.12-201ENST00000612820 244 ntBASIC7.03□□□□□ -1.28
LHX6Q9UPM6 AC244196.1-201ENST00000620569 409 ntAPPRIS P1 BASIC7.03□□□□□ -1.28
LHX6Q9UPM6 AC005841.2-201ENST00000637658 1167 ntAPPRIS P1 TSL 5 BASIC7.03□□□□□ -1.28
LHX6Q9UPM6 AC004947.1-201ENST00000420912 2781 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
LHX6Q9UPM6 MPPED2-201ENST00000358117 2405 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
LHX6Q9UPM6 TIAL1-203ENST00000369093 5072 ntTSL 2 BASIC7.03□□□□□ -1.28
LHX6Q9UPM6 OR4Q3-202ENST00000642117 2165 ntAPPRIS P1 BASIC7.03□□□□□ -1.28
LHX6Q9UPM6 SLC36A2-201ENST00000335244 3421 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
LHX6Q9UPM6 CA5B-201ENST00000318636 6835 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
LHX6Q9UPM6 NUDT13-203ENST00000372997 1919 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
LHX6Q9UPM6 GUCY2F-201ENST00000218006 3714 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
LHX6Q9UPM6 PDE4D-208ENST00000502484 2478 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
LHX6Q9UPM6 LPAR1-205ENST00000541779 2490 ntAPPRIS ALT1 TSL 1 (best) BASIC7.03□□□□□ -1.28
LHX6Q9UPM6 MKKS-201ENST00000347364 6714 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
LHX6Q9UPM6 KRBOX1-202ENST00000418176 2566 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
LHX6Q9UPM6 LINC00506-203ENST00000629295 4300 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
LHX6Q9UPM6 TMEM72-AS1-201ENST00000450287 3300 ntTSL 2 BASIC7.02□□□□□ -1.28
LHX6Q9UPM6 REG4-203ENST00000369401 2327 ntTSL 1 (best) BASIC7.02□□□□□ -1.28
LHX6Q9UPM6 DTNA-227ENST00000597599 1869 ntAPPRIS ALT2 TSL 2 BASIC7.02□□□□□ -1.28
LHX6Q9UPM6 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
LHX6Q9UPM6 LDB2-203ENST00000502640 2626 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
LHX6Q9UPM6 ERI2-215ENST00000569729 2646 ntTSL 2 BASIC7.02□□□□□ -1.29
LHX6Q9UPM6 USPL1-201ENST00000255304 3814 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
LHX6Q9UPM6 GRAMD2B-212ENST00000513040 2196 ntTSL 2 BASIC7.02□□□□□ -1.29
LHX6Q9UPM6 GRIA4-206ENST00000525187 2822 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
LHX6Q9UPM6 LINC02179-201ENST00000561523 3673 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
LHX6Q9UPM6 SNX16-202ENST00000353788 3032 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
LHX6Q9UPM6 AGXT2-201ENST00000231420 2364 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
LHX6Q9UPM6 AL359396.1-201ENST00000623151 2376 ntBASIC7.02□□□□□ -1.29
LHX6Q9UPM6 AP001148.1-201ENST00000624124 2359 ntBASIC7.02□□□□□ -1.29
LHX6Q9UPM6 GALNT11-201ENST00000415421 2555 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
LHX6Q9UPM6 LINC01958-201ENST00000637749 1941 ntTSL 5 BASIC7.02□□□□□ -1.29
LHX6Q9UPM6 FOPNL-206ENST00000573968 2039 ntTSL 2 BASIC7.02□□□□□ -1.29
LHX6Q9UPM6 RN7SKP78-201ENST00000364711 318 ntBASIC7.02□□□□□ -1.29
LHX6Q9UPM6 RNU6-1325P-201ENST00000364905 105 ntBASIC7.02□□□□□ -1.29
LHX6Q9UPM6 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
LHX6Q9UPM6 CARD17-201ENST00000375707 466 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
LHX6Q9UPM6 RNA5SP111-201ENST00000411386 101 ntBASIC7.02□□□□□ -1.29
LHX6Q9UPM6 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC7.02□□□□□ -1.29
LHX6Q9UPM6 CBX1P3-201ENST00000413296 527 ntBASIC7.02□□□□□ -1.29
LHX6Q9UPM6 TRAPPC2P10-201ENST00000415662 323 ntBASIC7.02□□□□□ -1.29
LHX6Q9UPM6 AL031584.2-201ENST00000420585 767 ntTSL 3 BASIC7.02□□□□□ -1.29
LHX6Q9UPM6 RPL23AP38-201ENST00000423801 469 ntBASIC7.02□□□□□ -1.29
LHX6Q9UPM6 TRAPPC2P5-201ENST00000426293 308 ntBASIC7.02□□□□□ -1.29
LHX6Q9UPM6 AL162727.2-201ENST00000428429 395 ntTSL 3 BASIC7.02□□□□□ -1.29
LHX6Q9UPM6 AL591178.2-201ENST00000429191 461 ntTSL 3 BASIC7.02□□□□□ -1.29
LHX6Q9UPM6 AC097468.2-201ENST00000429343 553 ntTSL 4 BASIC7.02□□□□□ -1.29
LHX6Q9UPM6 AC092162.1-201ENST00000432828 434 ntBASIC7.02□□□□□ -1.29
LHX6Q9UPM6 AL355339.1-201ENST00000434386 435 ntTSL 2 BASIC7.02□□□□□ -1.29
LHX6Q9UPM6 AC005094.1-201ENST00000440420 368 ntBASIC7.02□□□□□ -1.29
LHX6Q9UPM6 CEACAMP9-201ENST00000442990 513 ntBASIC7.02□□□□□ -1.29
LHX6Q9UPM6 AL161454.1-201ENST00000446226 569 ntBASIC7.02□□□□□ -1.29
LHX6Q9UPM6 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC7.02□□□□□ -1.29
LHX6Q9UPM6 RN7SL717P-201ENST00000478343 297 ntBASIC7.02□□□□□ -1.29
LHX6Q9UPM6 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
LHX6Q9UPM6 SNORD116-28-201ENST00000516123 91 ntBASIC7.02□□□□□ -1.29
LHX6Q9UPM6 ODF1-202ENST00000518835 368 ntTSL 3 BASIC7.02□□□□□ -1.29
LHX6Q9UPM6 IGHVII-62-1-201ENST00000519283 235 ntBASIC7.02□□□□□ -1.29
LHX6Q9UPM6 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC7.02□□□□□ -1.29
LHX6Q9UPM6 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC7.02□□□□□ -1.29
LHX6Q9UPM6 AL133371.1-201ENST00000555481 764 ntTSL 2 BASIC7.02□□□□□ -1.29
LHX6Q9UPM6 RPL7P50-201ENST00000600588 727 ntBASIC7.02□□□□□ -1.29
LHX6Q9UPM6 AL359881.1-201ENST00000602916 267 ntBASIC7.02□□□□□ -1.29
LHX6Q9UPM6 AC239809.3-203ENST00000611286 1050 ntTSL 5 BASIC7.02□□□□□ -1.29
LHX6Q9UPM6 AC022400.9-201ENST00000623633 273 ntBASIC7.02□□□□□ -1.29
LHX6Q9UPM6 AC073488.9-201ENST00000631601 754 ntBASIC7.02□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 199.2 ms