Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 AL390838.2-201ENST00000602394 274 ntBASIC5□□□□□ -1.61
TRIM38O00635 MRPS35P3-201ENST00000603189 709 ntBASIC5□□□□□ -1.61
TRIM38O00635 AC105254.2-201ENST00000603636 436 ntBASIC5□□□□□ -1.61
TRIM38O00635 AC008745.1-201ENST00000604064 271 ntBASIC5□□□□□ -1.61
TRIM38O00635 AL162591.3-201ENST00000607963 681 ntTSL 3 BASIC5□□□□□ -1.61
TRIM38O00635 MIR7703-201ENST00000620784 77 ntBASIC5□□□□□ -1.61
TRIM38O00635 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC5□□□□□ -1.61
TRIM38O00635 AC022509.4-201ENST00000621404 572 ntBASIC5□□□□□ -1.61
TRIM38O00635 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC5□□□□□ -1.61
TRIM38O00635 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC5□□□□□ -1.61
TRIM38O00635 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC5□□□□□ -1.61
TRIM38O00635 SAGE2P-201ENST00000420011 2126 ntBASIC5□□□□□ -1.61
TRIM38O00635 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC5□□□□□ -1.61
TRIM38O00635 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
TRIM38O00635 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC5□□□□□ -1.61
TRIM38O00635 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
TRIM38O00635 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC4.99□□□□□ -1.61
TRIM38O00635 ECM1P2-201ENST00000503354 1577 ntBASIC4.99□□□□□ -1.61
TRIM38O00635 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC4.99□□□□□ -1.61
TRIM38O00635 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
TRIM38O00635 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC4.99□□□□□ -1.61
TRIM38O00635 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC4.99□□□□□ -1.61
TRIM38O00635 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC4.99□□□□□ -1.61
TRIM38O00635 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC4.99□□□□□ -1.61
TRIM38O00635 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC4.99□□□□□ -1.61
TRIM38O00635 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
TRIM38O00635 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
TRIM38O00635 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC4.99□□□□□ -1.61
TRIM38O00635 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC4.99□□□□□ -1.61
TRIM38O00635 OR10A5-201ENST00000299454 1054 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
TRIM38O00635 RNU4-44P-201ENST00000363050 141 ntBASIC4.99□□□□□ -1.61
TRIM38O00635 RNU6-560P-201ENST00000364007 108 ntBASIC4.99□□□□□ -1.61
TRIM38O00635 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC4.99□□□□□ -1.61
TRIM38O00635 OTUD6B-202ENST00000404789 1089 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
TRIM38O00635 AL590084.1-201ENST00000407885 387 ntBASIC4.99□□□□□ -1.61
TRIM38O00635 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC4.99□□□□□ -1.61
TRIM38O00635 AC008280.1-201ENST00000418851 412 ntBASIC4.99□□□□□ -1.61
TRIM38O00635 AL358176.3-201ENST00000420757 454 ntBASIC4.99□□□□□ -1.61
TRIM38O00635 AC007559.1-201ENST00000428736 355 ntBASIC4.99□□□□□ -1.61
TRIM38O00635 LINC00595-203ENST00000432742 683 ntTSL 3 BASIC4.99□□□□□ -1.61
TRIM38O00635 NMNAT1P2-201ENST00000435192 860 ntBASIC4.99□□□□□ -1.61
TRIM38O00635 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC4.99□□□□□ -1.61
TRIM38O00635 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC4.99□□□□□ -1.61
TRIM38O00635 TRIM31-AS1-204ENST00000440874 549 ntTSL 3 BASIC4.99□□□□□ -1.61
TRIM38O00635 RPL21P133-201ENST00000443666 476 ntBASIC4.99□□□□□ -1.61
TRIM38O00635 AC112498.1-201ENST00000444401 332 ntBASIC4.99□□□□□ -1.61
TRIM38O00635 AL589765.3-201ENST00000446084 462 ntBASIC4.99□□□□□ -1.61
TRIM38O00635 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC4.99□□□□□ -1.61
TRIM38O00635 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC4.99□□□□□ -1.61
TRIM38O00635 AC073387.1-201ENST00000453261 709 ntBASIC4.99□□□□□ -1.61
TRIM38O00635 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC4.99□□□□□ -1.61
TRIM38O00635 HMGN3P1-201ENST00000453847 193 ntBASIC4.99□□□□□ -1.61
TRIM38O00635 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC4.99□□□□□ -1.61
TRIM38O00635 NF1P3-201ENST00000457709 450 ntBASIC4.99□□□□□ -1.61
TRIM38O00635 AC108475.1-201ENST00000507880 950 ntBASIC4.99□□□□□ -1.61
TRIM38O00635 KRT19P6-201ENST00000510983 209 ntBASIC4.99□□□□□ -1.61
TRIM38O00635 RNA5SP43-201ENST00000516559 110 ntBASIC4.99□□□□□ -1.61
TRIM38O00635 ZDHHC20P3-201ENST00000531576 336 ntBASIC4.99□□□□□ -1.61
TRIM38O00635 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC4.99□□□□□ -1.61
TRIM38O00635 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC4.99□□□□□ -1.61
TRIM38O00635 GCSHP4-201ENST00000538792 439 ntBASIC4.99□□□□□ -1.61
TRIM38O00635 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC4.99□□□□□ -1.61
TRIM38O00635 DUXAP6-201ENST00000553858 601 ntBASIC4.99□□□□□ -1.61
TRIM38O00635 AL391156.1-201ENST00000554965 554 ntBASIC4.99□□□□□ -1.61
TRIM38O00635 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC4.99□□□□□ -1.61
TRIM38O00635 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC4.99□□□□□ -1.61
TRIM38O00635 AC090515.3-201ENST00000560431 315 ntBASIC4.99□□□□□ -1.61
TRIM38O00635 ALOX12P2-208ENST00000574183 519 ntTSL 3 BASIC4.99□□□□□ -1.61
TRIM38O00635 MIR4270-201ENST00000581799 70 ntBASIC4.99□□□□□ -1.61
TRIM38O00635 MIR4801-201ENST00000582704 82 ntBASIC4.99□□□□□ -1.61
TRIM38O00635 MIR4512-201ENST00000583257 77 ntBASIC4.99□□□□□ -1.61
TRIM38O00635 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC4.99□□□□□ -1.61
TRIM38O00635 AC234771.5-201ENST00000600161 514 ntBASIC4.99□□□□□ -1.61
TRIM38O00635 AC239868.4-201ENST00000608318 671 ntBASIC4.99□□□□□ -1.61
TRIM38O00635 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC4.99□□□□□ -1.61
TRIM38O00635 AP000346.3-201ENST00000622821 210 ntBASIC4.99□□□□□ -1.61
TRIM38O00635 AC098679.5-201ENST00000624394 571 ntBASIC4.99□□□□□ -1.61
TRIM38O00635 AC092192.1-201ENST00000633154 1018 ntBASIC4.99□□□□□ -1.61
TRIM38O00635 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
TRIM38O00635 AL583808.2-201ENST00000418078 1382 ntTSL 5 BASIC4.99□□□□□ -1.61
TRIM38O00635 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
TRIM38O00635 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC4.99□□□□□ -1.61
TRIM38O00635 AC107081.3-201ENST00000612715 2034 ntBASIC4.99□□□□□ -1.61
TRIM38O00635 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC4.99□□□□□ -1.61
TRIM38O00635 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC4.99□□□□□ -1.61
TRIM38O00635 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC4.98□□□□□ -1.61
TRIM38O00635 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
TRIM38O00635 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
TRIM38O00635 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC4.98□□□□□ -1.61
TRIM38O00635 MAPK6PS3-201ENST00000403865 2162 ntBASIC4.98□□□□□ -1.61
TRIM38O00635 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
TRIM38O00635 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
TRIM38O00635 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
TRIM38O00635 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
TRIM38O00635 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
TRIM38O00635 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC4.98□□□□□ -1.61
TRIM38O00635 RNU6-582P-201ENST00000362989 107 ntBASIC4.98□□□□□ -1.61
TRIM38O00635 Y_RNA.201-201ENST00000364052 96 ntBASIC4.98□□□□□ -1.61
TRIM38O00635 SNORD116.1-201ENST00000365628 92 ntBASIC4.98□□□□□ -1.61
TRIM38O00635 R3HCC1L-204ENST00000370586 941 ntTSL 3 BASIC4.98□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 90.3 ms