Protein–RNA interactions for Protein: Q9BYR4

KRTAP4-3, Keratin-associated protein 4-3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-3Q9BYR4 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC2.26□□□□□ -2.05
KRTAP4-3Q9BYR4 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC2.26□□□□□ -2.05
KRTAP4-3Q9BYR4 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC2.26□□□□□ -2.05
KRTAP4-3Q9BYR4 MIR3942-201ENST00000585264 109 ntBASIC2.26□□□□□ -2.05
KRTAP4-3Q9BYR4 AC010325.2-201ENST00000594114 260 ntTSL 3 BASIC2.26□□□□□ -2.05
KRTAP4-3Q9BYR4 AL133247.2-201ENST00000603236 482 ntBASIC2.26□□□□□ -2.05
KRTAP4-3Q9BYR4 AL499605.1-201ENST00000604628 403 ntBASIC2.26□□□□□ -2.05
KRTAP4-3Q9BYR4 AC114477.1-201ENST00000605097 605 ntBASIC2.26□□□□□ -2.05
KRTAP4-3Q9BYR4 AC092902.3-201ENST00000610060 373 ntTSL 3 BASIC2.26□□□□□ -2.05
KRTAP4-3Q9BYR4 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC2.26□□□□□ -2.05
KRTAP4-3Q9BYR4 AP001264.1-201ENST00000620602 703 ntBASIC2.26□□□□□ -2.05
KRTAP4-3Q9BYR4 MIR6806-201ENST00000622141 64 ntBASIC2.26□□□□□ -2.05
KRTAP4-3Q9BYR4 AL162377.2-201ENST00000624532 337 ntBASIC2.26□□□□□ -2.05
KRTAP4-3Q9BYR4 CR381572.2-201ENST00000624852 397 ntBASIC2.26□□□□□ -2.05
KRTAP4-3Q9BYR4 LINC00836-201ENST00000625325 582 ntTSL 4 BASIC2.26□□□□□ -2.05
KRTAP4-3Q9BYR4 PFKM-232ENST00000629846 381 ntTSL 4 BASIC2.26□□□□□ -2.05
KRTAP4-3Q9BYR4 LINC00969-332ENST00000630874 738 ntTSL 5 BASIC2.26□□□□□ -2.05
KRTAP4-3Q9BYR4 AC099654.6-201ENST00000636487 512 ntBASIC2.26□□□□□ -2.05
KRTAP4-3Q9BYR4 DLD-214ENST00000639772 421 ntTSL 5 BASIC2.26□□□□□ -2.05
KRTAP4-3Q9BYR4 PARP8-212ENST00000505697 2747 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
KRTAP4-3Q9BYR4 VTCN1-207ENST00000539893 2719 ntTSL 2 BASIC2.26□□□□□ -2.05
KRTAP4-3Q9BYR4 PRICKLE2-205ENST00000638394 9956 ntAPPRIS P2 TSL 1 (best) BASIC2.26□□□□□ -2.05
KRTAP4-3Q9BYR4 C10orf25-201ENST00000625168 3078 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
KRTAP4-3Q9BYR4 IFIT1B-201ENST00000371809 1972 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
KRTAP4-3Q9BYR4 ADAMTS9-AS2-203ENST00000481312 1970 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
KRTAP4-3Q9BYR4 RTN4-203ENST00000357376 4110 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
KRTAP4-3Q9BYR4 HMG20A-202ENST00000381714 4112 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
KRTAP4-3Q9BYR4 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC2.26□□□□□ -2.05
KRTAP4-3Q9BYR4 A2M-201ENST00000318602 4844 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
KRTAP4-3Q9BYR4 IL31RA-201ENST00000297015 2695 ntAPPRIS ALT2 TSL 5 BASIC2.26□□□□□ -2.05
KRTAP4-3Q9BYR4 KCNMA1-266ENST00000639601 11920 ntAPPRIS ALT2 TSL 5 BASIC2.26□□□□□ -2.05
KRTAP4-3Q9BYR4 AC010328.1-201ENST00000596769 4060 ntTSL 2 BASIC2.26□□□□□ -2.05
KRTAP4-3Q9BYR4 MRE11-201ENST00000323929 6897 ntAPPRIS P3 TSL 1 (best) BASIC2.26□□□□□ -2.05
KRTAP4-3Q9BYR4 PRICKLE2-201ENST00000295902 7918 ntAPPRIS ALT2 TSL 5 BASIC2.26□□□□□ -2.05
KRTAP4-3Q9BYR4 POLA1-201ENST00000379059 5440 ntAPPRIS P3 TSL 1 (best) BASIC2.26□□□□□ -2.05
KRTAP4-3Q9BYR4 LIMS1-203ENST00000393310 4392 ntAPPRIS P3 TSL 1 (best) BASIC2.26□□□□□ -2.05
KRTAP4-3Q9BYR4 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
KRTAP4-3Q9BYR4 POLA1-206ENST00000611764 5434 ntAPPRIS ALT2 TSL 5 BASIC2.26□□□□□ -2.05
KRTAP4-3Q9BYR4 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC2.26□□□□□ -2.05
KRTAP4-3Q9BYR4 KCNMB2-210ENST00000617329 2214 ntTSL 2 BASIC2.26□□□□□ -2.05
KRTAP4-3Q9BYR4 CRYZ-201ENST00000340866 1888 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
KRTAP4-3Q9BYR4 WDR93-204ENST00000558000 1886 ntAPPRIS ALT2 TSL 1 (best) BASIC2.26□□□□□ -2.05
KRTAP4-3Q9BYR4 BIN2P1-201ENST00000504996 1530 ntBASIC2.26□□□□□ -2.05
KRTAP4-3Q9BYR4 SPECC1L-207ENST00000541492 3525 ntTSL 2 BASIC2.26□□□□□ -2.05
KRTAP4-3Q9BYR4 AMOT-201ENST00000304758 6888 ntAPPRIS P3 TSL 1 (best) BASIC2.26□□□□□ -2.05
KRTAP4-3Q9BYR4 AC020978.6-201ENST00000571197 3177 ntBASIC2.26□□□□□ -2.05
KRTAP4-3Q9BYR4 HSPA8P1-201ENST00000425843 1833 ntBASIC2.26□□□□□ -2.05
KRTAP4-3Q9BYR4 ADAMTS3-204ENST00000622135 4479 ntAPPRIS P1 TSL 2 BASIC2.26□□□□□ -2.05
KRTAP4-3Q9BYR4 NPL-201ENST00000258317 2461 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
KRTAP4-3Q9BYR4 OLMALINC-203ENST00000641087 3779 ntBASIC2.26□□□□□ -2.05
KRTAP4-3Q9BYR4 GJA10-203ENST00000638915 1479 ntAPPRIS ALT2 TSL 5 BASIC2.26□□□□□ -2.05
KRTAP4-3Q9BYR4 STIL-201ENST00000337817 5087 ntAPPRIS ALT2 TSL 5 BASIC2.26□□□□□ -2.05
KRTAP4-3Q9BYR4 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC2.26□□□□□ -2.05
KRTAP4-3Q9BYR4 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC2.26□□□□□ -2.05
KRTAP4-3Q9BYR4 FAM186A-203ENST00000543096 2116 ntAPPRIS ALT2 TSL 2 BASIC2.26□□□□□ -2.05
KRTAP4-3Q9BYR4 NPHP1-203ENST00000393272 2752 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
KRTAP4-3Q9BYR4 PRDM2-201ENST00000235372 7957 ntAPPRIS P4 TSL 1 (best) BASIC2.26□□□□□ -2.05
KRTAP4-3Q9BYR4 KLF7-202ENST00000412414 7954 ntTSL 2 BASIC2.26□□□□□ -2.05
KRTAP4-3Q9BYR4 RACGAP1-203ENST00000454520 3080 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
KRTAP4-3Q9BYR4 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC2.26□□□□□ -2.05
KRTAP4-3Q9BYR4 AC097063.1-201ENST00000426714 1797 ntBASIC2.26□□□□□ -2.05
KRTAP4-3Q9BYR4 CCAT2-201ENST00000630920 1752 ntBASIC2.26□□□□□ -2.05
KRTAP4-3Q9BYR4 AC092724.1-201ENST00000624623 3397 ntBASIC2.26□□□□□ -2.05
KRTAP4-3Q9BYR4 RAG1-201ENST00000299440 6564 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
KRTAP4-3Q9BYR4 FBXO40-201ENST00000338040 5929 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
KRTAP4-3Q9BYR4 SRBD1-201ENST00000263736 3681 ntAPPRIS P1 TSL 2 BASIC2.26□□□□□ -2.05
KRTAP4-3Q9BYR4 ASH1L-202ENST00000392403 10979 ntAPPRIS P2 TSL 5 BASIC2.25□□□□□ -2.05
KRTAP4-3Q9BYR4 ZRANB3-202ENST00000401392 6820 ntAPPRIS ALT2 TSL 1 (best) BASIC2.25□□□□□ -2.05
KRTAP4-3Q9BYR4 CAP1P2-201ENST00000417455 1409 ntBASIC2.25□□□□□ -2.05
KRTAP4-3Q9BYR4 DLG2-201ENST00000280241 7730 ntAPPRIS ALT2 TSL 5 BASIC2.25□□□□□ -2.05
KRTAP4-3Q9BYR4 SOX6-208ENST00000527619 2699 ntAPPRIS ALT2 TSL 1 (best) BASIC2.25□□□□□ -2.05
KRTAP4-3Q9BYR4 SCRN1-202ENST00000409497 1732 ntAPPRIS P1 TSL 2 BASIC2.25□□□□□ -2.05
KRTAP4-3Q9BYR4 VN2R1P-201ENST00000449668 1743 ntBASIC2.25□□□□□ -2.05
KRTAP4-3Q9BYR4 MCFD2-202ENST00000409105 4210 ntAPPRIS P1 TSL 5 BASIC2.25□□□□□ -2.05
KRTAP4-3Q9BYR4 PLN-201ENST00000357525 2001 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
KRTAP4-3Q9BYR4 LTA4H-209ENST00000552789 2025 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
KRTAP4-3Q9BYR4 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC2.25□□□□□ -2.05
KRTAP4-3Q9BYR4 LYSMD3-203ENST00000500869 3863 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
KRTAP4-3Q9BYR4 RNF145-209ENST00000520638 2340 ntTSL 2 BASIC2.25□□□□□ -2.05
KRTAP4-3Q9BYR4 ZNF438-201ENST00000331737 3243 ntAPPRIS ALT2 TSL 1 (best) BASIC2.25□□□□□ -2.05
KRTAP4-3Q9BYR4 LINC00284-201ENST00000423211 3208 ntTSL 2 BASIC2.25□□□□□ -2.05
KRTAP4-3Q9BYR4 SEPT7-AS1-203ENST00000437235 3810 ntTSL 5 BASIC2.25□□□□□ -2.05
KRTAP4-3Q9BYR4 CLSTN2-201ENST00000458420 14202 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
KRTAP4-3Q9BYR4 SLC22A25-201ENST00000306494 1692 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
KRTAP4-3Q9BYR4 SNW1-204ENST00000554775 1687 ntTSL 5 BASIC2.25□□□□□ -2.05
KRTAP4-3Q9BYR4 AC090220.1-201ENST00000593078 1699 ntBASIC2.25□□□□□ -2.05
KRTAP4-3Q9BYR4 LINC01787-201ENST00000435311 1994 ntTSL 2 BASIC2.25□□□□□ -2.05
KRTAP4-3Q9BYR4 LINC01606-203ENST00000519160 2292 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
KRTAP4-3Q9BYR4 SEMA3A-204ENST00000436949 2550 ntAPPRIS P1 TSL 5 BASIC2.25□□□□□ -2.05
KRTAP4-3Q9BYR4 FBXO43-201ENST00000428847 2886 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
KRTAP4-3Q9BYR4 GJC1-202ENST00000426548 7640 ntAPPRIS P1 TSL 3 BASIC2.25□□□□□ -2.05
KRTAP4-3Q9BYR4 EPHA3-201ENST00000336596 5809 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
KRTAP4-3Q9BYR4 SPATA31B1P-201ENST00000434692 4016 ntBASIC2.25□□□□□ -2.05
KRTAP4-3Q9BYR4 MID1-205ENST00000380785 6092 ntAPPRIS P1 TSL 2 BASIC2.25□□□□□ -2.05
KRTAP4-3Q9BYR4 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
KRTAP4-3Q9BYR4 INTS12-202ENST00000394735 1927 ntTSL 5 BASIC2.25□□□□□ -2.05
KRTAP4-3Q9BYR4 RAP1GDS1-204ENST00000408900 1942 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
KRTAP4-3Q9BYR4 AC007785.2-201ENST00000598627 1916 ntBASIC2.25□□□□□ -2.05
KRTAP4-3Q9BYR4 BCO2-214ENST00000532593 1647 ntTSL 2 BASIC2.25□□□□□ -2.05
KRTAP4-3Q9BYR4 HMGCR-209ENST00000511206 3395 ntAPPRIS P1 TSL 2 BASIC2.25□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 77.5 ms