Protein–RNA interactions for Protein: P31277

HOXD11, Homeobox protein Hox-D11, humanhuman

Predicted RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD11P31277 HABP2-201ENST00000351270 3009 ntAPPRIS P3 TSL 1 (best) BASIC8.7□□□□□ -1.02
HOXD11P31277 SLC7A2-202ENST00000398090 7557 ntAPPRIS P3 TSL 1 (best) BASIC8.7□□□□□ -1.02
HOXD11P31277 SLC7A2-201ENST00000004531 7560 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
HOXD11P31277 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
HOXD11P31277 BMX-202ENST00000348343 2531 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
HOXD11P31277 FCAR-202ENST00000353758 537 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
HOXD11P31277 SNORA72.4-201ENST00000384174 132 ntBASIC8.7□□□□□ -1.02
HOXD11P31277 MT-TC-201ENST00000387405 66 ntBASIC8.7□□□□□ -1.02
HOXD11P31277 RNA5SP475-201ENST00000410568 110 ntBASIC8.7□□□□□ -1.02
HOXD11P31277 RN7SKP236-201ENST00000410635 284 ntBASIC8.7□□□□□ -1.02
HOXD11P31277 ERI3-IT1-201ENST00000414156 619 ntTSL 3 BASIC8.7□□□□□ -1.02
HOXD11P31277 RPL26P27-201ENST00000414397 437 ntBASIC8.7□□□□□ -1.02
HOXD11P31277 AL358075.3-201ENST00000426289 226 ntBASIC8.7□□□□□ -1.02
HOXD11P31277 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC8.7□□□□□ -1.02
HOXD11P31277 AC010469.1-201ENST00000463864 576 ntBASIC8.7□□□□□ -1.02
HOXD11P31277 AL591122.1-201ENST00000487348 492 ntBASIC8.7□□□□□ -1.02
HOXD11P31277 SEC31A-227ENST00000508502 3801 ntAPPRIS ALT1 TSL 1 (best) BASIC8.7□□□□□ -1.02
HOXD11P31277 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC8.7□□□□□ -1.02
HOXD11P31277 AC068898.2-201ENST00000514425 597 ntTSL 4 BASIC8.7□□□□□ -1.02
HOXD11P31277 RNU6-436P-201ENST00000516171 114 ntBASIC8.7□□□□□ -1.02
HOXD11P31277 AP000873.2-209ENST00000528083 547 ntTSL 4 BASIC8.7□□□□□ -1.02
HOXD11P31277 MITF-217ENST00000531774 1074 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
HOXD11P31277 AL355076.3-201ENST00000555838 587 ntBASIC8.7□□□□□ -1.02
HOXD11P31277 AC104046.1-201ENST00000559487 406 ntBASIC8.7□□□□□ -1.02
HOXD11P31277 ZNF192P1-203ENST00000565888 810 ntBASIC8.7□□□□□ -1.02
HOXD11P31277 JPT1-211ENST00000581874 517 ntTSL 5 BASIC8.7□□□□□ -1.02
HOXD11P31277 AC022916.4-201ENST00000585646 475 ntTSL 3 BASIC8.7□□□□□ -1.02
HOXD11P31277 TRIM37-214ENST00000625984 204 ntTSL 5 BASIC8.7□□□□□ -1.02
HOXD11P31277 SELENON-205ENST00000630065 2994 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
HOXD11P31277 TADA2A-205ENST00000615182 4253 ntAPPRIS P1 TSL 5 BASIC8.7□□□□□ -1.02
HOXD11P31277 ERMAP-203ENST00000372517 3423 ntAPPRIS P2 TSL 1 (best) BASIC8.7□□□□□ -1.02
HOXD11P31277 ZNF546-207ENST00000600094 3426 ntAPPRIS ALT2 TSL 2 BASIC8.7□□□□□ -1.02
HOXD11P31277 ZKSCAN1-201ENST00000324306 9418 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
HOXD11P31277 CPT1B-201ENST00000312108 2592 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
HOXD11P31277 SPATA13-206ENST00000424834 8603 ntAPPRIS ALT2 TSL 1 (best) BASIC8.7□□□□□ -1.02
HOXD11P31277 FBXL20-201ENST00000264658 10388 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
HOXD11P31277 NCEH1-205ENST00000538775 4315 ntAPPRIS ALT2 TSL 2 BASIC8.7□□□□□ -1.02
HOXD11P31277 MCF2-209ENST00000520602 3945 ntAPPRIS ALT2 TSL 5 BASIC8.7□□□□□ -1.02
HOXD11P31277 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC8.7□□□□□ -1.02
HOXD11P31277 AL590132.1-201ENST00000639602 4455 ntAPPRIS P1 TSL 5 BASIC8.7□□□□□ -1.02
HOXD11P31277 LTN1-203ENST00000389195 2714 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
HOXD11P31277 AC105342.1-201ENST00000378334 6848 ntBASIC8.7□□□□□ -1.02
HOXD11P31277 ZNF195-207ENST00000429541 2389 ntAPPRIS ALT2 TSL 5 BASIC8.7□□□□□ -1.02
HOXD11P31277 CCDC15-201ENST00000344762 3893 ntAPPRIS P2 TSL 5 BASIC8.7□□□□□ -1.02
HOXD11P31277 BX005214.3-201ENST00000615174 1988 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
HOXD11P31277 CNOT4-212ENST00000541284 3563 ntAPPRIS ALT1 TSL 5 BASIC8.69□□□□□ -1.02
HOXD11P31277 ARHGEF3-202ENST00000338458 3639 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
HOXD11P31277 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC8.69□□□□□ -1.02
HOXD11P31277 PPFIA2-220ENST00000550584 5405 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
HOXD11P31277 CWF19L2-201ENST00000282251 3278 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
HOXD11P31277 GMPR2-203ENST00000399440 1652 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
HOXD11P31277 TTPAL-201ENST00000262605 6212 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
HOXD11P31277 FMO4-201ENST00000367749 2252 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
HOXD11P31277 RAB27A-202ENST00000396307 3459 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
HOXD11P31277 LINC00838-201ENST00000562956 2936 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
HOXD11P31277 AC093671.1-201ENST00000624981 2929 ntBASIC8.69□□□□□ -1.02
HOXD11P31277 LARS2-203ENST00000415258 4744 ntAPPRIS P1 TSL 5 BASIC8.69□□□□□ -1.02
HOXD11P31277 MSL3-206ENST00000380693 2377 ntTSL 2 BASIC8.69□□□□□ -1.02
HOXD11P31277 AC068389.1-202ENST00000526470 3564 ntTSL 2 BASIC8.69□□□□□ -1.02
HOXD11P31277 ZSCAN32-201ENST00000304926 3027 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
HOXD11P31277 OR9Q1-201ENST00000335397 2488 ntAPPRIS P1 BASIC8.69□□□□□ -1.02
HOXD11P31277 COX7B-203ENST00000481445 2471 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
HOXD11P31277 CEACAM7-201ENST00000006724 2489 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
HOXD11P31277 TGFB2-201ENST00000366929 5053 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
HOXD11P31277 CLDN2-203ENST00000541806 3150 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
HOXD11P31277 RNU1-120P-201ENST00000363009 157 ntBASIC8.69□□□□□ -1.02
HOXD11P31277 RNU6-1205P-201ENST00000363625 106 ntBASIC8.69□□□□□ -1.02
HOXD11P31277 MIR487A-201ENST00000385009 80 ntBASIC8.69□□□□□ -1.02
HOXD11P31277 SNORA79-201ENST00000408376 140 ntBASIC8.69□□□□□ -1.02
HOXD11P31277 SNORA11D-201ENST00000408548 128 ntBASIC8.69□□□□□ -1.02
HOXD11P31277 SNORA11E-201ENST00000408778 128 ntBASIC8.69□□□□□ -1.02
HOXD11P31277 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC8.69□□□□□ -1.02
HOXD11P31277 AL807761.3-201ENST00000427833 329 ntTSL 3 BASIC8.69□□□□□ -1.02
HOXD11P31277 AC128677.1-201ENST00000436016 442 ntBASIC8.69□□□□□ -1.02
HOXD11P31277 CYP2C56P-201ENST00000440076 291 ntBASIC8.69□□□□□ -1.02
HOXD11P31277 AL390728.3-201ENST00000452704 270 ntBASIC8.69□□□□□ -1.02
HOXD11P31277 AL590490.1-201ENST00000455599 316 ntTSL 5 BASIC8.69□□□□□ -1.02
HOXD11P31277 AC109454.1-201ENST00000471205 498 ntBASIC8.69□□□□□ -1.02
HOXD11P31277 GAPDHP35-201ENST00000513369 976 ntBASIC8.69□□□□□ -1.02
HOXD11P31277 AC005871.2-201ENST00000549104 526 ntTSL 4 BASIC8.69□□□□□ -1.02
HOXD11P31277 AL135978.1-201ENST00000553618 1266 ntBASIC8.69□□□□□ -1.02
HOXD11P31277 AC073964.1-201ENST00000558938 308 ntTSL 3 BASIC8.69□□□□□ -1.02
HOXD11P31277 RN7SL786P-201ENST00000579130 298 ntBASIC8.69□□□□□ -1.02
HOXD11P31277 MIR4682-201ENST00000580643 80 ntBASIC8.69□□□□□ -1.02
HOXD11P31277 AC007952.7-201ENST00000583141 757 ntBASIC8.69□□□□□ -1.02
HOXD11P31277 AC009502.1-202ENST00000606673 602 ntTSL 3 BASIC8.69□□□□□ -1.02
HOXD11P31277 BX005040.2-201ENST00000620504 370 ntBASIC8.69□□□□□ -1.02
HOXD11P31277 METAP1-212ENST00000625963 147 ntTSL 5 BASIC8.69□□□□□ -1.02
HOXD11P31277 AC241585.2-209ENST00000638217 143 ntBASIC8.69□□□□□ -1.02
HOXD11P31277 PCDH11Y-202ENST00000333703 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC8.69□□□□□ -1.02
HOXD11P31277 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC8.69□□□□□ -1.02
HOXD11P31277 NTRK3-221ENST00000629765 2714 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
HOXD11P31277 ZNF211-205ENST00000391703 2239 ntTSL 2 BASIC8.69□□□□□ -1.02
HOXD11P31277 TNPO3-202ENST00000471166 3019 ntTSL 5 BASIC8.69□□□□□ -1.02
HOXD11P31277 SEC16A-204ENST00000313084 3073 ntAPPRIS ALT2 TSL 2 BASIC8.69□□□□□ -1.02
HOXD11P31277 RAD17-205ENST00000354868 3060 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
HOXD11P31277 DNAH11-201ENST00000328843 13917 ntAPPRIS ALT2 TSL 5 BASIC8.69□□□□□ -1.02
HOXD11P31277 AC016205.1-201ENST00000591629 2306 ntTSL 2 BASIC8.69□□□□□ -1.02
HOXD11P31277 TAGAP-203ENST00000367066 3887 ntAPPRIS P4 TSL 1 (best) BASIC8.69□□□□□ -1.02
HOXD11P31277 ZNF200-203ENST00000396871 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC8.69□□□□□ -1.02
Retrieved 100 of 98,524 protein–RNA pairs in 890.3 ms