Protein–RNA interactions for Protein: P13569

CFTR, Cystic fibrosis transmembrane conductance regulator, humanhuman

Predictions only

Length 1,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFTRP13569 MRPS35P3-201ENST00000603189 709 ntBASIC5.98□□□□□ -1.45
CFTRP13569 AC073657.2-201ENST00000605661 303 ntBASIC5.98□□□□□ -1.45
CFTRP13569 AC107294.1-201ENST00000609524 467 ntBASIC5.98□□□□□ -1.45
CFTRP13569 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC5.98□□□□□ -1.45
CFTRP13569 AL354821.1-201ENST00000617598 809 ntTSL 3 BASIC5.98□□□□□ -1.45
CFTRP13569 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC5.98□□□□□ -1.45
CFTRP13569 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
CFTRP13569 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC5.98□□□□□ -1.45
CFTRP13569 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
CFTRP13569 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC5.97□□□□□ -1.45
CFTRP13569 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
CFTRP13569 U3.23-201ENST00000391132 200 ntBASIC5.97□□□□□ -1.45
CFTRP13569 AL121970.1-201ENST00000447557 929 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
CFTRP13569 PRELID3BP6-201ENST00000503839 571 ntBASIC5.97□□□□□ -1.45
CFTRP13569 AC107032.2-201ENST00000551082 386 ntTSL 3 BASIC5.97□□□□□ -1.45
CFTRP13569 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC5.97□□□□□ -1.45
CFTRP13569 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
CFTRP13569 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC5.97□□□□□ -1.45
CFTRP13569 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
CFTRP13569 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC5.96□□□□□ -1.45
CFTRP13569 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC5.96□□□□□ -1.45
CFTRP13569 RNU1-108P-201ENST00000362556 161 ntBASIC5.96□□□□□ -1.45
CFTRP13569 RNU4-47P-201ENST00000410876 114 ntBASIC5.96□□□□□ -1.45
CFTRP13569 AC063979.1-201ENST00000415539 377 ntBASIC5.96□□□□□ -1.45
CFTRP13569 AC093698.1-201ENST00000423843 571 ntBASIC5.96□□□□□ -1.45
CFTRP13569 ZDHHC20P2-201ENST00000424108 429 ntBASIC5.96□□□□□ -1.45
CFTRP13569 AC008065.1-201ENST00000428525 348 ntBASIC5.96□□□□□ -1.45
CFTRP13569 BX119904.1-201ENST00000432026 348 ntBASIC5.96□□□□□ -1.45
CFTRP13569 AL353705.1-201ENST00000433468 480 ntBASIC5.96□□□□□ -1.45
CFTRP13569 AC008481.1-201ENST00000463278 396 ntBASIC5.96□□□□□ -1.45
CFTRP13569 RPS3AP43-201ENST00000479743 781 ntBASIC5.96□□□□□ -1.45
CFTRP13569 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC5.96□□□□□ -1.45
CFTRP13569 AL162274.2-201ENST00000614406 332 ntBASIC5.96□□□□□ -1.45
CFTRP13569 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC5.96□□□□□ -1.46
CFTRP13569 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC5.96□□□□□ -1.46
CFTRP13569 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC5.96□□□□□ -1.46
CFTRP13569 RNA5SP197-201ENST00000363357 119 ntBASIC5.96□□□□□ -1.46
CFTRP13569 RNU1-140P-201ENST00000365040 165 ntBASIC5.96□□□□□ -1.46
CFTRP13569 UBE2V1P2-201ENST00000397758 440 ntBASIC5.96□□□□□ -1.46
CFTRP13569 COTL1P1-201ENST00000422309 375 ntBASIC5.96□□□□□ -1.46
CFTRP13569 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC5.96□□□□□ -1.46
CFTRP13569 RPL21P8-201ENST00000465083 535 ntBASIC5.96□□□□□ -1.46
CFTRP13569 HIGD1AP3-201ENST00000515857 278 ntBASIC5.96□□□□□ -1.46
CFTRP13569 RN7SKP209-201ENST00000516888 304 ntBASIC5.96□□□□□ -1.46
CFTRP13569 AC105999.2-201ENST00000521363 881 ntTSL 2 BASIC5.96□□□□□ -1.46
CFTRP13569 AP006245.1-201ENST00000522549 120 ntBASIC5.96□□□□□ -1.46
CFTRP13569 AC012603.1-201ENST00000606424 528 ntBASIC5.96□□□□□ -1.46
CFTRP13569 AC110801.1-201ENST00000623590 212 ntBASIC5.96□□□□□ -1.46
CFTRP13569 AP001043.1-201ENST00000626259 773 ntTSL 5 BASIC5.96□□□□□ -1.46
CFTRP13569 DDX18P4-201ENST00000511690 1966 ntBASIC5.95□□□□□ -1.46
CFTRP13569 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC5.95□□□□□ -1.46
CFTRP13569 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
CFTRP13569 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
CFTRP13569 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC5.95□□□□□ -1.46
CFTRP13569 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
CFTRP13569 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC5.95□□□□□ -1.46
CFTRP13569 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
CFTRP13569 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
CFTRP13569 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
CFTRP13569 IARS-201ENST00000375627 697 ntTSL 3 BASIC5.95□□□□□ -1.46
CFTRP13569 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
CFTRP13569 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC5.95□□□□□ -1.46
CFTRP13569 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC5.95□□□□□ -1.46
CFTRP13569 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC5.95□□□□□ -1.46
CFTRP13569 AC138932.5-201ENST00000617759 563 ntBASIC5.95□□□□□ -1.46
CFTRP13569 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
CFTRP13569 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
CFTRP13569 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC5.95□□□□□ -1.46
CFTRP13569 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC5.95□□□□□ -1.46
CFTRP13569 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC5.94□□□□□ -1.46
CFTRP13569 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
CFTRP13569 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC5.94□□□□□ -1.46
CFTRP13569 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC5.94□□□□□ -1.46
CFTRP13569 DDX6P1-205ENST00000441966 1436 ntBASIC5.94□□□□□ -1.46
CFTRP13569 RSL24D1P1-201ENST00000404972 493 ntBASIC5.94□□□□□ -1.46
CFTRP13569 AC092747.2-201ENST00000545069 983 ntBASIC5.94□□□□□ -1.46
CFTRP13569 AC004024.1-201ENST00000549244 247 ntBASIC5.94□□□□□ -1.46
CFTRP13569 OR7A8P-201ENST00000595427 913 ntBASIC5.94□□□□□ -1.46
CFTRP13569 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
CFTRP13569 AL713922.2-201ENST00000619384 716 ntBASIC5.94□□□□□ -1.46
CFTRP13569 BANCR-201ENST00000624238 473 ntTSL 2 BASIC5.94□□□□□ -1.46
CFTRP13569 AC011266.1-201ENST00000624119 3569 ntBASIC5.94□□□□□ -1.46
CFTRP13569 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
CFTRP13569 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
CFTRP13569 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
CFTRP13569 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC5.94□□□□□ -1.46
CFTRP13569 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
CFTRP13569 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC5.94□□□□□ -1.46
CFTRP13569 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
CFTRP13569 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC5.93□□□□□ -1.46
CFTRP13569 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
CFTRP13569 AC007656.2-201ENST00000624902 4547 ntBASIC5.93□□□□□ -1.46
CFTRP13569 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC5.93□□□□□ -1.46
CFTRP13569 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC5.93□□□□□ -1.46
CFTRP13569 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC5.93□□□□□ -1.46
CFTRP13569 AC025750.2-201ENST00000442609 450 ntBASIC5.93□□□□□ -1.46
CFTRP13569 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC5.93□□□□□ -1.46
CFTRP13569 AC023598.1-201ENST00000472521 361 ntBASIC5.93□□□□□ -1.46
CFTRP13569 RPL7P38-201ENST00000488396 739 ntBASIC5.93□□□□□ -1.46
CFTRP13569 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC5.93□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 91.4 ms