Protein–RNA interactions for Protein: Q9Y5P3

RAI2, Retinoic acid-induced protein 2, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI2Q9Y5P3 AC107956.1-201ENST00000494359 873 ntBASIC19.59■□□□□ 0.73
RAI2Q9Y5P3 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
RAI2Q9Y5P3 AL353708.3-201ENST00000610272 989 ntBASIC19.59■□□□□ 0.73
RAI2Q9Y5P3 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
RAI2Q9Y5P3 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC19.59■□□□□ 0.73
RAI2Q9Y5P3 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC19.59■□□□□ 0.73
RAI2Q9Y5P3 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
RAI2Q9Y5P3 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
RAI2Q9Y5P3 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC19.59■□□□□ 0.73
RAI2Q9Y5P3 ANKRD18DP-204ENST00000455355 1975 ntBASIC19.59■□□□□ 0.73
RAI2Q9Y5P3 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
RAI2Q9Y5P3 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
RAI2Q9Y5P3 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
RAI2Q9Y5P3 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC19.58■□□□□ 0.73
RAI2Q9Y5P3 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC19.58■□□□□ 0.73
RAI2Q9Y5P3 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
RAI2Q9Y5P3 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC19.58■□□□□ 0.73
RAI2Q9Y5P3 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
RAI2Q9Y5P3 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC19.58■□□□□ 0.72
RAI2Q9Y5P3 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC19.58■□□□□ 0.72
RAI2Q9Y5P3 AC233702.5-201ENST00000584107 538 ntBASIC19.58■□□□□ 0.72
RAI2Q9Y5P3 RPS15-203ENST00000586096 570 ntTSL 2 BASIC19.58■□□□□ 0.72
RAI2Q9Y5P3 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
RAI2Q9Y5P3 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC19.58■□□□□ 0.72
RAI2Q9Y5P3 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC19.58■□□□□ 0.72
RAI2Q9Y5P3 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
RAI2Q9Y5P3 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC19.58■□□□□ 0.72
RAI2Q9Y5P3 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
RAI2Q9Y5P3 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
RAI2Q9Y5P3 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
RAI2Q9Y5P3 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC19.58■□□□□ 0.72
RAI2Q9Y5P3 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
RAI2Q9Y5P3 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
RAI2Q9Y5P3 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RAI2Q9Y5P3 ZNF815P-204ENST00000434898 1737 ntBASIC19.57■□□□□ 0.72
RAI2Q9Y5P3 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
RAI2Q9Y5P3 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC19.57■□□□□ 0.72
RAI2Q9Y5P3 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
RAI2Q9Y5P3 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC19.57■□□□□ 0.72
RAI2Q9Y5P3 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
RAI2Q9Y5P3 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
RAI2Q9Y5P3 AC012618.2-201ENST00000428058 849 ntBASIC19.57■□□□□ 0.72
RAI2Q9Y5P3 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
RAI2Q9Y5P3 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC19.57■□□□□ 0.72
RAI2Q9Y5P3 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC19.57■□□□□ 0.72
RAI2Q9Y5P3 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC19.57■□□□□ 0.72
RAI2Q9Y5P3 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC19.57■□□□□ 0.72
RAI2Q9Y5P3 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
RAI2Q9Y5P3 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RAI2Q9Y5P3 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RAI2Q9Y5P3 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
RAI2Q9Y5P3 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC19.57■□□□□ 0.72
RAI2Q9Y5P3 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
RAI2Q9Y5P3 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
RAI2Q9Y5P3 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
RAI2Q9Y5P3 SAPCD2P4-201ENST00000424595 1171 ntBASIC19.56■□□□□ 0.72
RAI2Q9Y5P3 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC19.56■□□□□ 0.72
RAI2Q9Y5P3 KSR1P1-201ENST00000446298 240 ntBASIC19.56■□□□□ 0.72
RAI2Q9Y5P3 KRT18P35-201ENST00000510488 1269 ntBASIC19.56■□□□□ 0.72
RAI2Q9Y5P3 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC19.56■□□□□ 0.72
RAI2Q9Y5P3 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC19.56■□□□□ 0.72
RAI2Q9Y5P3 AC073195.1-201ENST00000607241 877 ntBASIC19.56■□□□□ 0.72
RAI2Q9Y5P3 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC19.56■□□□□ 0.72
RAI2Q9Y5P3 AL445675.2-201ENST00000620291 557 ntBASIC19.56■□□□□ 0.72
RAI2Q9Y5P3 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC19.56■□□□□ 0.72
RAI2Q9Y5P3 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RAI2Q9Y5P3 LINC01465-201ENST00000408887 1940 ntBASIC19.56■□□□□ 0.72
RAI2Q9Y5P3 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
RAI2Q9Y5P3 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RAI2Q9Y5P3 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
RAI2Q9Y5P3 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC19.56■□□□□ 0.72
RAI2Q9Y5P3 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
RAI2Q9Y5P3 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
RAI2Q9Y5P3 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC19.56■□□□□ 0.72
RAI2Q9Y5P3 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC19.55■□□□□ 0.72
RAI2Q9Y5P3 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC19.55■□□□□ 0.72
RAI2Q9Y5P3 TP73-202ENST00000354437 2140 ntTSL 5 BASIC19.55■□□□□ 0.72
RAI2Q9Y5P3 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RAI2Q9Y5P3 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
RAI2Q9Y5P3 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC19.55■□□□□ 0.72
RAI2Q9Y5P3 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
RAI2Q9Y5P3 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
RAI2Q9Y5P3 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RAI2Q9Y5P3 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RAI2Q9Y5P3 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC19.55■□□□□ 0.72
RAI2Q9Y5P3 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
RAI2Q9Y5P3 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
RAI2Q9Y5P3 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RAI2Q9Y5P3 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC19.55■□□□□ 0.72
RAI2Q9Y5P3 PPOX-219ENST00000544598 813 ntTSL 2 BASIC19.55■□□□□ 0.72
RAI2Q9Y5P3 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC19.55■□□□□ 0.72
RAI2Q9Y5P3 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC19.55■□□□□ 0.72
RAI2Q9Y5P3 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
RAI2Q9Y5P3 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RAI2Q9Y5P3 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RAI2Q9Y5P3 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
RAI2Q9Y5P3 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RAI2Q9Y5P3 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RAI2Q9Y5P3 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC19.54■□□□□ 0.72
RAI2Q9Y5P3 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms